; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0016760 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016760
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionATP-dependent DNA helicase
Genome locationchr12:12040632..12043487
RNA-Seq ExpressionPay0016760
SyntenyPay0016760
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006268 - DNA unwinding involved in DNA replication (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0009378 - four-way junction helicase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062277.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.1e-1372.88Show/hide
Query:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        GHLMD  EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
KAE8648436.1 hypothetical protein Csa_008851 [Cucumis sativus]1.1e-1758.43Show/hide
Query:  LLSLAAKLGFDEESAEACLDRI----INLYGHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        LL+    + +D + A +   R+    + L  HLMDNCEG RLNIEN TFEN MP EVLDWVRVES+SSL GTLADG+DNFG A VA  +
Subjt:  LLSLAAKLGFDEESAEACLDRI----INLYGHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
TYK26710.1 uncharacterized protein E5676_scaffold313G003720 [Cucumis melo var. makuwa]8.1e-1372.88Show/hide
Query:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        GHLMD  EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
XP_011655236.1 uncharacterized protein LOC101212787 isoform X1 [Cucumis sativus]3.9e-1578.57Show/hide
Query:  MDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        MDNCEG RLNIEN TFEN MP EVLDWVRVES+SSL GTLADG+DNFG A VA  +
Subjt:  MDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
XP_031741378.1 uncharacterized protein LOC101212787 isoform X2 [Cucumis sativus]3.9e-1578.57Show/hide
Query:  MDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        MDNCEG RLNIEN TFEN MP EVLDWVRVES+SSL GTLADG+DNFG A VA  +
Subjt:  MDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
TrEMBL top hitse value%identityAlignment
A0A0A0KNC1 Uncharacterized protein1.5e-1779.66Show/hide
Query:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        GHLMDNCEG RLNIEN TFEN MP EVLDWVRVES+SSL GTLADG+DNFG A VA  +
Subjt:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
A0A1S3CCP8 uncharacterized protein LOC103499334 isoform X22.2e-1173.08Show/hide
Query:  EGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  EGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
A0A1S3CCT1 uncharacterized protein LOC103499334 isoform X12.2e-1173.08Show/hide
Query:  EGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  EGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
A0A5A7V5P6 Ty3-gypsy retrotransposon protein3.9e-1372.88Show/hide
Query:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        GHLMD  EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
A0A5D3DTU4 Uncharacterized protein3.9e-1372.88Show/hide
Query:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
        GHLMD  EG RLNIEN T EN+MP E LDWVRVES+SSLSGTLADG+DN G A VA  +
Subjt:  GHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANE
SwissProt top hitse value%identityAlignment
Q9FT74 ATP-dependent DNA helicase Q-like 16.2e-0866.67Show/hide
Query:  MGGHDLELERARLLSLAAKLGFDEESAEACLDRIINLYG
        M   DLELE+ RL+SLA KLGFDE+SA+ CLDR ++LYG
Subjt:  MGGHDLELERARLLSLAAKLGFDEESAEACLDRIINLYG
Arabidopsis top hitse value%identityAlignment
AT3G05740.1 RECQ helicase l14.4e-0966.67Show/hide
Query:  MGGHDLELERARLLSLAAKLGFDEESAEACLDRIINLYG
        M   DLELE+ RL+SLA KLGFDE+SA+ CLDR ++LYG
Subjt:  MGGHDLELERARLLSLAAKLGFDEESAEACLDRIINLYG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGACACGACTTGGAATTGGAGAGAGCTCGATTGTTAAGCTTGGCAGCGAAACTCGGTTTCGATGAAGAATCGGCTGAGGCTTGCTTGGACCGCATAATCAACCT
ATATGGTCATCTTATGGACAACTGCGAGGGGACTCGATTAAATATAGAGAACTCGACTTTTGAGAATATAATGCCACTTGAGGTTCTTGATTGGGTAAGGGTGGAATCCA
TGAGCAGCTTATCAGGTACCTTGGCAGATGGTATAGATAACTTTGGTTATGCTAGTGTGGCTGCAAACGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGACACGACTTGGAATTGGAGAGAGCTCGATTGTTAAGCTTGGCAGCGAAACTCGGTTTCGATGAAGAATCGGCTGAGGCTTGCTTGGACCGCATAATCAACCT
ATATGGTCATCTTATGGACAACTGCGAGGGGACTCGATTAAATATAGAGAACTCGACTTTTGAGAATATAATGCCACTTGAGGTTCTTGATTGGGTAAGGGTGGAATCCA
TGAGCAGCTTATCAGGTACCTTGGCAGATGGTATAGATAACTTTGGTTATGCTAGTGTGGCTGCAAACGAAGATTAA
Protein sequenceShow/hide protein sequence
MGGHDLELERARLLSLAAKLGFDEESAEACLDRIINLYGHLMDNCEGTRLNIENSTFENIMPLEVLDWVRVESMSSLSGTLADGIDNFGYASVAANED