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Pay0016770 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016770
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr08:10052052..10052513
RNA-Seq ExpressionPay0016770
SyntenyPay0016770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042141.1 hypothetical protein E6C27_scaffold67G006300 [Cucumis melo var. makuwa]8.1e-3652.41Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK
        ++HKS KYIFDQKELNLRQR W++LIKDYDCTI Y   KANVVA AL RKSS                    +  ++VG +G+L+A F+V+P L   I+K
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK

Query:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR
        +QL+D  LRKLA+EVR  +R +Y  R DGA +K  RLCVP ++  K+ I +EAHSSAY MH  ST+
Subjt:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR

KAA0042458.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.4e-3552.41Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK
        +DHKSLKYIFDQKELNLRQR  ++LIKDYDCTI Y   KANVVA AL RKSS                    +  +++G +G+LI  F+V+P L   I+K
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK

Query:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR
        +QL+D  LRKLA++VR  +R +Y  R DGA +K  RLCVP ++  K+ IL+EAHSSAY+MH  ST+
Subjt:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR

TYK18080.1 hypothetical protein E5676_scaffold306G004160 [Cucumis melo var. makuwa]8.1e-3652.41Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK
        ++HKS KYIFDQKELNLRQR W++LIKDYDCTI Y   KANVVA AL RKSS                    +  ++VG +G+L+A F+V+P L   I+K
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK

Query:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR
        +QL+D  LRKLA+EVR  +R +Y  R DGA +K  RLCVP ++  K+ I +EAHSSAY MH  ST+
Subjt:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR

TYK22589.1 hypothetical protein E5676_scaffold195G00060 [Cucumis melo var. makuwa]2.6e-7498.67Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
        MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC

Query:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRC
        ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHA  TRC
Subjt:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRC

XP_008455805.1 PREDICTED: uncharacterized protein LOC103495900 [Cucumis melo]1.3e-78100Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
        MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC

Query:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
        ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
Subjt:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL

TrEMBL top hitse value%identityAlignment
A0A1S3C1V8 uncharacterized protein LOC1034959006.4e-79100Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
        MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC

Query:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
        ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
Subjt:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL

A0A5A7SJK7 Integrase, catalytic core6.4e-79100Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
        MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC

Query:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
        ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL
Subjt:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL

A0A5A7TKQ0 Uncharacterized protein3.9e-3652.41Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK
        ++HKS KYIFDQKELNLRQR W++LIKDYDCTI Y   KANVVA AL RKSS                    +  ++VG +G+L+A F+V+P L   I+K
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK

Query:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR
        +QL+D  LRKLA+EVR  +R +Y  R DGA +K  RLCVP ++  K+ I +EAHSSAY MH  ST+
Subjt:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR

A0A5D3D2Y2 Uncharacterized protein3.9e-3652.41Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK
        ++HKS KYIFDQKELNLRQR W++LIKDYDCTI Y   KANVVA AL RKSS                    +  ++VG +G+L+A F+V+P L   I+K
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKR-----------------KFILNVGLVGNLIARFKVKPTLEKEIVK

Query:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR
        +QL+D  LRKLA+EVR  +R +Y  R DGA +K  RLCVP ++  K+ I +EAHSSAY MH  ST+
Subjt:  SQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTR

A0A5D3DH41 Uncharacterized protein1.3e-7498.67Show/hide
Query:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
        MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC
Subjt:  MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRC

Query:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRC
        ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHA  TRC
Subjt:  ERRSDYIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACAAGAGCTTGAAGTACATATTTGATCAGAAAGAATTGAATTTAAGGCAGAGACATTGGATGAAGCTCATTAAGGATTATGATTGCACTATCGCATAC
CGTCTTAGGAAAGCCAATGTTGTAGCTGGAGCGTTGGGTAGGAAAAGCTCAAGTAAAAGAAAGTTCATTTTAAATGTAGGATTAGTTGGGAATTTAATAGCTCGA
TTTAAAGTTAAACCCACATTGGAAAAAGAGATTGTTAAATCACAACTTGAAGATCCCCCATTGAGGAAGTTGGCAAAAGAAGTGAGGTGTGAAAGACGATCAGAC
TACATATTCAGAAGTGATGGAGCATCACTAAAGGAGATGAGATTATGTGTTCCCCAAAATAAGGCATTCAAGGAAAGTATCTTAAAAGAAGCCCATAGTTCAGCT
TACGTGATGCATGCTACAAGTACTAGATGTGGAGAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACAAGAGCTTGAAGTACATATTTGATCAGAAAGAATTGAATTTAAGGCAGAGACATTGGATGAAGCTCATTAAGGATTATGATTGCACTATCGCATAC
CGTCTTAGGAAAGCCAATGTTGTAGCTGGAGCGTTGGGTAGGAAAAGCTCAAGTAAAAGAAAGTTCATTTTAAATGTAGGATTAGTTGGGAATTTAATAGCTCGA
TTTAAAGTTAAACCCACATTGGAAAAAGAGATTGTTAAATCACAACTTGAAGATCCCCCATTGAGGAAGTTGGCAAAAGAAGTGAGGTGTGAAAGACGATCAGAC
TACATATTCAGAAGTGATGGAGCATCACTAAAGGAGATGAGATTATGTGTTCCCCAAAATAAGGCATTCAAGGAAAGTATCTTAAAAGAAGCCCATAGTTCAGCT
TACGTGATGCATGCTACAAGTACTAGATGTGGAGAACTTTAA
Protein sequenceShow/hide protein sequence
MDHKSLKYIFDQKELNLRQRHWMKLIKDYDCTIAYRLRKANVVAGALGRKSSSKRKFILNVGLVGNLIARFKVKPTLEKEIVKSQLEDPPLRKLAKEVRCERRSD
YIFRSDGASLKEMRLCVPQNKAFKESILKEAHSSAYVMHATSTRCGEL