| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 1.1e-125 | 43.94 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPS ASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLP PREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP
+VTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Query: S
S
Subjt: S
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| KAA0050760.1 pol protein [Cucumis melo var. makuwa] | 1.7e-126 | 43.4 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVR+YPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
A+HEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
Subjt: ----------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
Query: HFVPGKSTYTAS
HFVPGKSTYTAS
Subjt: HFVPGKSTYTAS
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| KAA0061201.1 pol protein [Cucumis melo var. makuwa] | 4.4e-127 | 44.61 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--------------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--------------------------
Query: --SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-----
+VTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: --SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQHPAGLLQPLSV GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+PGKSTYTAS
Subjt: --------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| KAA0066365.1 pol protein [Cucumis melo var. makuwa] | 2.8e-126 | 44.35 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRL KSAHFVPGKSTYTAS
Subjt: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| XP_008460554.1 PREDICTED: uncharacterized protein LOC103499342 [Cucumis melo] | 1.4e-133 | 75.8 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSAN+A+I C KEVVFNP ASFKF+G A ASKLL+QGTW ILASVVD E EVSLSSE VVREYP+VFPDEL LP PR+VDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
AI+LE T PISRAPYRM PAELK+LKVQLQELLDKGFIRP AEHEEHLHQVL TL ANKLYAKF K SE+RSFLGLAGYYRRFVE FS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
IASPLTQLTRK TPFVWSPAC++SFQELKQKLV+ PVLTVPDGSG+FVIYSDASKK L VKAPRQ P GLLQPLSV GWKWESVSMDFITGLP+TLKGY
Subjt: IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
Query: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
TVIWV+VDRLTKSAHF+ GKSTYTAS +D L G R SR C
Subjt: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3CCQ8 uncharacterized protein LOC103499342 | 6.8e-134 | 75.8 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSAN+A+I C KEVVFNP ASFKF+G A ASKLL+QGTW ILASVVD E EVSLSSE VVREYP+VFPDEL LP PR+VDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
AI+LE T PISRAPYRM PAELK+LKVQLQELLDKGFIRP AEHEEHLHQVL TL ANKLYAKF K SE+RSFLGLAGYYRRFVE FS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
IASPLTQLTRK TPFVWSPAC++SFQELKQKLV+ PVLTVPDGSG+FVIYSDASKK L VKAPRQ P GLLQPLSV GWKWESVSMDFITGLP+TLKGY
Subjt: IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
Query: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
TVIWV+VDRLTKSAHF+ GKSTYTAS +D L G R SR C
Subjt: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
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| A0A5A7TY28 Reverse transcriptase | 5.2e-126 | 43.94 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPS ASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLP PREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP
+VTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Query: S
S
Subjt: S
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| A0A5A7U6G5 Reverse transcriptase | 8.1e-127 | 43.4 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVR+YPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
A+HEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
Subjt: ----------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
Query: HFVPGKSTYTAS
HFVPGKSTYTAS
Subjt: HFVPGKSTYTAS
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| A0A5A7V5X5 Pol protein | 2.1e-127 | 44.61 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--------------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--------------------------
Query: --SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-----
+VTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: --SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQHPAGLLQPLSV GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+PGKSTYTAS
Subjt: --------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| A0A5A7VKS7 Reverse transcriptase | 1.4e-126 | 44.35 | Show/hide |
Query: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
MDWLSANHANIDCFGKEVVFNPPSGASFKFRG A ASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Subjt: MDWLSANHANIDCFGKEVVFNPPSGASFKFRG----------QAWYASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRL KSAHFVPGKSTYTAS
Subjt: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.8e-14 | 36.89 | Show/hide |
Query: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPR
+++ +P P+ EI++FLGL GYYR+F+ +F+ IA P+T+ +K +P +S+F++LK + P+L VPD + F + +DAS LG V +
Subjt: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPR
Query: QHP
HP
Subjt: QHP
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| P08361 Gag-Pol polyprotein | 3.1e-14 | 36.89 | Show/hide |
Query: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P P T ++R FLG AG+ R ++ F+ +A+PL LT+ GT F W P + +FQE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.3e-14 | 35.51 | Show/hide |
Query: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPR
K++ ++P P+ EIR+FLGL GYYR+F+ +++ IA P+T +K T +F++LK ++ P+L +PD FV+ +DAS LG V +
Subjt: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPR
Query: QHPAGLL
HP +
Subjt: QHPAGLL
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| P26808 Gag-Pol polyprotein | 3.1e-14 | 36.07 | Show/hide |
Query: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P P T ++R FLG AG+ R ++ F+ +A+PL LT+ GT F W P + ++QE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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| P26809 Gag-Pol polyprotein | 3.1e-14 | 36.07 | Show/hide |
Query: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P P T ++R FLG AG+ R ++ F+ +A+PL LT+ GT F W P + ++QE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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