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Pay0016897 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016897
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionprotein RETICULATA-RELATED 4, chloroplastic-like
Genome locationchr11:12629557..12631352
RNA-Seq ExpressionPay0016897
SyntenyPay0016897
Gene Ontology termsGO:0031969 - chloroplast membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99870.1 protein RETICULATA-RELATED 4 [Cucumis melo var. makuwa]4.9e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
XP_004149738.1 protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus]4.9e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
XP_008461823.1 PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo]4.9e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
XP_016903189.1 PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo]3.9e-1789.66Show/hide
Query:  MLLERPRSCTSSSSEKLSQLFLQWVALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        MLLERPRSCTSSSSEKLSQLFLQWVALA TSFSFLQRVGAVVRNG KLF V SGA +V
Subjt:  MLLERPRSCTSSSSEKLSQLFLQWVALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
TrEMBL top hitse value%identityAlignment
A0A0A0LCC3 Uncharacterized protein2.4e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
A0A1S3CG26 protein RETICULATA-RELATED 4, chloroplastic-like2.4e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
A0A1S4E4N7 protein RETICULATA-RELATED 4, chloroplastic-like1.9e-1789.66Show/hide
Query:  MLLERPRSCTSSSSEKLSQLFLQWVALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        MLLERPRSCTSSSSEKLSQLFLQWVALA TSFSFLQRVGAVVRNG KLF V SGA +V
Subjt:  MLLERPRSCTSSSSEKLSQLFLQWVALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
A0A5A7TXM9 Protein RETICULATA-RELATED 42.4e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
A0A5D3BJ78 Protein RETICULATA-RELATED 42.4e-0485.29Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VALA TSFSFLQRVGAVVRNGAKLF V SGA +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12470.1 Protein of unknown function (DUF3411)6.8e-0455.88Show/hide
Query:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV
        VAL+ TS++ LQR+GA+ RNGAKLF V + + +V
Subjt:  VALASTSFSFLQRVGAVVRNGAKLFTVESGAFMV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACAATGGGTGGCGTTGGCGAGTACCTCCTTTTCGTTTCTTCAGAG
AGTTGGTGCTGTGGTGCGTAATGGGGCCAAGCTATTTACTGTAGAGAGTGGTGCATTTATGGTTATGTCTTGGGTCTTAGTGGGGATAGTTTTCTCTTACTGA
mRNA sequenceShow/hide mRNA sequence
CGATCCCAAACTCACCCATCCAAAATGCCGCCGATGCCTCCCCTGCTCACCCATCCCAAACGTCGCCGAACGCCAAACGCTAACTTCCATCCGAATGCCGAACGCCTAAC
GCGAACGCTGCTCCCCTGCTCCCTTGCTCGTCGAATGCCTAACGCGAACGCGAACGCTGCTCCCTTTCTCTTTTGCTATCTTTGTTGTTTGTTAGGTTTCTAGATTTGAT
TACTTTTGTTGGTTCCTTTTTGTTACGTATCAGGTTCTTAGACAAATTGAAAATAGCTGGCTAAGGGAAAGGAGAAATGAGATTGACCTTCACCAAGCTTTTCAGTAGGC
TTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACA
ATGGGTGGCGTTGGCGAGTACCTCCTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGCGTAATGGGGCCAAGCTATTTACTGTAGAGAGTGGTGCATTTATGGTTATGT
CTTGGGTCTTAGTGGGGATAGTTTTCTCTTACTGA
Protein sequenceShow/hide protein sequence
MLLERPRSCTSSSSEKLSQLFLQWVALASTSFSFLQRVGAVVRNGAKLFTVESGAFMVMSWVLVGIVFSY