CuGenDBv2

Gene ID	Pay0016915
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	chr06:28920679..28921790
RNA-Seq Expression	Pay0016915
Synteny	Pay0016915
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

9.1e-110

99.53

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

3.2e-107

97.18

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF ALNQPETFPIEKRRRS+ILRQRKP+TEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

1.8e-110

100

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_038903492.1 uncharacterized protein LOC120090072 isoform X1 [Benincasa hispida]

1.2e-96

93.56

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDPNFSALNQPE+FPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  AR
        AR
Subjt:  AR

XP_038903493.1 uncharacterized protein LOC120090072 isoform X2 [Benincasa hispida]

6.1e-98

92.27

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDPNFSALNQPE+FPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAI
        ARC   I
Subjt:  ARCRQAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

1.6e-107

97.18

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF ALNQPETFPIEKRRRS+ILRQRKP+TEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC103493403

8.9e-111

100

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

4.4e-110

99.53

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC111438454

4.9e-93

84.98

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+K +S+ SESDPNFPSP+P+F ALNQPE+FPIEKRRRSEI+RQR+P+ +I KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1JD53 uncharacterized protein LOC111483306

3.7e-93

84.51

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLPQS P+FT PLQIT KR LS+K +S+ SESDPNFPSPDP+F ALNQPE+FP+EKRRRSEI+RQR+P+ EI KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

8.3e-61

66.34

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Query:  LSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINL
        LS+ N  + +P    SF   ++ T+K       N +  +   N  +P P        E FPIEKRRRSEI+R R     I KPEPPNFEIGWKRTKEINL
Subjt:  LSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINL

Query:  EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAIL
        EKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ QA+ARCRQAIL
Subjt:  EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAIL

Query:  VANSF
        VANSF
Subjt:  VANSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCT
CTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCTAACTTCAGCGCTCTTAACCAACCAGAAACCTTCCCAATAGAGAAACGAA
GAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAG
CCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAG
GGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGA
AGGCGGCCGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGA

mRNA sequence

Show/hide mRNA sequence

GTGGTTAGACTCTGAGCCCAACACCAGTATTCATTTTCCCAAAAAGATATTTTTGAGATATGAGAAAGCATAAAACTATCCAACAATGCTAAAAAGAAGAAGCTTATCTA
CTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCTGTTCTTCCATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATC
TCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCTA
ACTTCAGCGCTCTTAACCAACCAGAAACCTTCCCAATAGAGAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCC
AACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATT
TGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAG
AGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCCGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGA
CAAGCTATACTTGTTGCTAATTCTTTTTGAGTTATATAACAAATTGTTGAGGCAATTCATTTCTCTTTGTAAAGTGTATCAATCCATTTTCGCCCTAATTCAAATTTAGT
TTAGATTGTGCTTTGTGCCTAATATTGTGTGTTTGTCTTAATAATTTGTAGTGTTATTTTGATAAGGAGTTTTGGTTAGTTGGGAAATATTGAAGTACATTGGCAATACC
ATATTTCCCTTGTTCGAACTATCTGTTTGCTTTAATACCTTTCCGTAGATTTCTTGTCGTTGCGAATAATAAGTAGAGGTAATATAAAATATTGTTCATACTATTAGTAT
AGGAATTTTCCG

Protein sequence

Show/hide protein sequence

MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEK
PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

Pay0016915 (gene) of Melon (Payzawat) v1 genome