; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0016932 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016932
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr01:24360572..24365327
RNA-Seq ExpressionPay0016932
SyntenyPay0016932
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032588.1 uncharacterized protein E6C27_scaffold43053G00550 [Cucumis melo var. makuwa]3.1e-8837.83Show/hide
Query:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL
        EGE S HH TI+EE EI TPEED EDV QSLEDGGQS VDELKEVNLGT+EEPR TFISASLSSE+EGKYMSLLT+Y+DIFAWSYKE PRLDPKVA+H+L
Subjt:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL

Query:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------
         IK GYR IKQ                                  IAN++P+++KN                                            
Subjt:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------EQLC---------L
                                                                                              E++C         L
Subjt:  --------------------------------------------------------------------------------------EQLC---------L

Query:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------
        RHYMQ FTVHLVAKA+PIKYVLSRPIIS RLAKWAV++Q+YDI                                                         
Subjt:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------

Query:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT
                    KHMLPYS  LAELCSNN+A+YQALIIGLQM LEIGVSFIEIYGDSKLIIN LSLQ D+KHE LKPYFTYARQLME+FDSVML HVPRT
Subjt:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT

Query:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        +NKRAD LANLATTL M  N+ LNI LCQ+ IMP +  ECQKAN+
Subjt:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

KAA0062672.1 hypothetical protein E6C27_scaffold79G001920 [Cucumis melo var. makuwa]2.7e-8451.43Show/hide
Query:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------
        +SLEDGGQSTVDELKEVNLGT+EEPR TFISASLS+E+EGKYMSLL KY+DIFAWSYKE P LD KVA+H++ IK GYR IK + +              
Subjt:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------

Query:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV
                                                                        VV  +R+ + L        CLR Y      ++   V
Subjt:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV

Query:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI
        HLVAKADPIKYVLSRPIISGRLAKWAVLLQ+YDI                  +H++P  + L E    ++   +ALIIGLQMALEIGVS IEIYGDSKLI
Subjt:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI

Query:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        IN L LQYD+KHE LKPYFTYA++LME+FDSVML HVPRT+NKR D LANLAT+LTM +++ LNI L Q+ IMP I SECQ+ANI
Subjt:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

TYK01206.1 hypothetical protein E5676_scaffold2044G00520 [Cucumis melo var. makuwa]2.7e-8451.43Show/hide
Query:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------
        +SLEDGGQSTVDELKEVNLGT+EEPR TFISASLS+E+EGKYMSLL KY+DIFAWSYKE P LD KV +H++ IK GYR IK + +              
Subjt:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------

Query:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV
                                                                        VV  +R+ + L        CLR Y      ++   V
Subjt:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV

Query:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI
        HLVAKADPIKYVLSRPIISGRLAKWAVLLQ+YDI                  +H++P  + L E    ++   +ALIIGLQMALEIGVS IEIYGDSKLI
Subjt:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI

Query:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        IN L LQYD+KHE LKPYFTYAR+LME+FDSVML HVPRT+NKR D LANLAT+LTM +++ LNI L Q+ IMP I SECQ+ANI
Subjt:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

TYK20897.1 uncharacterized protein E5676_scaffold284G00330 [Cucumis melo var. makuwa]3.1e-8837.83Show/hide
Query:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL
        EGE S HH TI+EE EI TPEED EDV QSLEDGGQS VDELKEVNLGT+EEPR TFISASLSSE+EGKYMSLLT+Y+DIFAWSYKE PRLDPKVA+H+L
Subjt:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL

Query:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------
         IK GYR IKQ                                  IAN++P+++KN                                            
Subjt:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------EQLC---------L
                                                                                              E++C         L
Subjt:  --------------------------------------------------------------------------------------EQLC---------L

Query:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------
        RHYMQ FTVHLVAKA+PIKYVLSRPIIS RLAKWAV++Q+YDI                                                         
Subjt:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------

Query:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT
                    KHMLPYS  LAELCSNN+A+YQALIIGLQM LEIGVSFIEIYGDSKLIIN LSLQ D+KHE LKPYFTYARQLME+FDSVML HVPRT
Subjt:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT

Query:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        +NKRAD LANLATTL M  N+ LNI LCQ+ IMP +  ECQKAN+
Subjt:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.3e-8335.03Show/hide
Query:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL
        EGETSCHH TIIEESE GT EEDAE+  QSLEDGGQSTVDELKEVNLGT+EEPR TFISASLS+E+  KYMSLLT+YRDIFAWSYKE P LDPKVAVH+L
Subjt:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL

Query:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------
         IK GYR IKQ                                  IAN+VP+R+KN                                            
Subjt:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------EQLC---------LRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVL
                                                         E++C         LRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVL
Subjt:  -------------------------------------------------EQLC---------LRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVL

Query:  LQKYDI---------------------------------------------------------------------KHMLPYSFTLAELCSNNMAQYQALI
        LQ+YDI                                                                     KHMLPYSF L+ELCSNN+A+YQALI
Subjt:  LQKYDI---------------------------------------------------------------------KHMLPYSFTLAELCSNNMAQYQALI

Query:  IGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIF
        IGLQ+ALEIGVSFIE+YGDSKLIIN LSLQYD+KHE LKPYF YARQLMEKFD+VML HVPR +NKRAD LANLAT LTM +++TLNI LCQR I+P + 
Subjt:  IGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIF

Query:  SECQKANI
         ECQ+ N+
Subjt:  SECQKANI

TrEMBL top hitse value%identityAlignment
A0A5A7SPY4 RNase H domain-containing protein1.5e-8837.83Show/hide
Query:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL
        EGE S HH TI+EE EI TPEED EDV QSLEDGGQS VDELKEVNLGT+EEPR TFISASLSSE+EGKYMSLLT+Y+DIFAWSYKE PRLDPKVA+H+L
Subjt:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL

Query:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------
         IK GYR IKQ                                  IAN++P+++KN                                            
Subjt:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------EQLC---------L
                                                                                              E++C         L
Subjt:  --------------------------------------------------------------------------------------EQLC---------L

Query:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------
        RHYMQ FTVHLVAKA+PIKYVLSRPIIS RLAKWAV++Q+YDI                                                         
Subjt:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------

Query:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT
                    KHMLPYS  LAELCSNN+A+YQALIIGLQM LEIGVSFIEIYGDSKLIIN LSLQ D+KHE LKPYFTYARQLME+FDSVML HVPRT
Subjt:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT

Query:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        +NKRAD LANLATTL M  N+ LNI LCQ+ IMP +  ECQKAN+
Subjt:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

A0A5A7T0F8 RNase H domain-containing protein6.2e-8264.6Show/hide
Query:  EESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGY-RLIKQ
        +ESEI T EEDAEDVLQSLEDGGQSTVDELKEVNLG +EEPR +FIS SLS+E+E KY SLL +YRDIFAWSYK+  RLDPKV VH+LTIK G+ RLI+ 
Subjt:  EESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGY-RLIKQ

Query:  IANVVPIR---RKNEQLCLRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDIKHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSF
          + + IR   RK   L LR       + L++                              KHMLPY F LAELCSNN+A+YQALIIGLQMAL+I VSF
Subjt:  IANVVPIR---RKNEQLCLRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDIKHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSF

Query:  IEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQ
        IEIYGDSKLIIN LSLQYD+KHE LK YFTYARQLME+FDSVML HV R +NKRADTLAN AT LT  E+ITLNI LCQ+ IMP I SECQ
Subjt:  IEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQ

A0A5A7V370 Uncharacterized protein1.3e-8451.43Show/hide
Query:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------
        +SLEDGGQSTVDELKEVNLGT+EEPR TFISASLS+E+EGKYMSLL KY+DIFAWSYKE P LD KVA+H++ IK GYR IK + +              
Subjt:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------

Query:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV
                                                                        VV  +R+ + L        CLR Y      ++   V
Subjt:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV

Query:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI
        HLVAKADPIKYVLSRPIISGRLAKWAVLLQ+YDI                  +H++P  + L E    ++   +ALIIGLQMALEIGVS IEIYGDSKLI
Subjt:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI

Query:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        IN L LQYD+KHE LKPYFTYA++LME+FDSVML HVPRT+NKR D LANLAT+LTM +++ LNI L Q+ IMP I SECQ+ANI
Subjt:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

A0A5D3BSK4 Uncharacterized protein1.3e-8451.43Show/hide
Query:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------
        +SLEDGGQSTVDELKEVNLGT+EEPR TFISASLS+E+EGKYMSLL KY+DIFAWSYKE P LD KV +H++ IK GYR IK + +              
Subjt:  QSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQGYRLIKQIAN--------------

Query:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV
                                                                        VV  +R+ + L        CLR Y      ++   V
Subjt:  ----------------------------------------------------------------VVPIRRKNEQL--------CLRHY------MQAFTV

Query:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI
        HLVAKADPIKYVLSRPIISGRLAKWAVLLQ+YDI                  +H++P  + L E    ++   +ALIIGLQMALEIGVS IEIYGDSKLI
Subjt:  HLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI------------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLI

Query:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        IN L LQYD+KHE LKPYFTYAR+LME+FDSVML HVPRT+NKR D LANLAT+LTM +++ LNI L Q+ IMP I SECQ+ANI
Subjt:  INLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

A0A5D3DB95 RNase H domain-containing protein1.5e-8837.83Show/hide
Query:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL
        EGE S HH TI+EE EI TPEED EDV QSLEDGGQS VDELKEVNLGT+EEPR TFISASLSSE+EGKYMSLLT+Y+DIFAWSYKE PRLDPKVA+H+L
Subjt:  EGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNL

Query:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------
         IK GYR IKQ                                  IAN++P+++KN                                            
Subjt:  TIKQGYRLIKQ----------------------------------IANVVPIRRKN--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------EQLC---------L
                                                                                              E++C         L
Subjt:  --------------------------------------------------------------------------------------EQLC---------L

Query:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------
        RHYMQ FTVHLVAKA+PIKYVLSRPIIS RLAKWAV++Q+YDI                                                         
Subjt:  RHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDI---------------------------------------------------------

Query:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT
                    KHMLPYS  LAELCSNN+A+YQALIIGLQM LEIGVSFIEIYGDSKLIIN LSLQ D+KHE LKPYFTYARQLME+FDSVML HVPRT
Subjt:  ------------KHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRT

Query:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI
        +NKRAD LANLATTL M  N+ LNI LCQ+ IMP +  ECQKAN+
Subjt:  KNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANI

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI1.8e-0635.96Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTL
        +NN+A+Y  LI  ++  L +G+S   I GDS+L+I  ++ +Y +K + + P +  A +L +K ++  L+ VPR +NK AD L+ +A  L
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTL

P64956 Uncharacterized protein Mb2253c8.2e-0735.71Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN
        +NN+A+Y+ LI GL  A+++G +   +  DSKL++  +S ++ +KH  L   +  A+ L  +F  +    VPR +N  AD LAN
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN

P9WLH4 Uncharacterized protein MT22878.2e-0735.71Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN
        +NN+A+Y+ LI GL  A+++G +   +  DSKL++  +S ++ +KH  L   +  A+ L  +F  +    VPR +N  AD LAN
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN

P9WLH5 Bifunctional protein Rv2228c8.2e-0735.71Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN
        +NN+A+Y+ LI GL  A+++G +   +  DSKL++  +S ++ +KH  L   +  A+ L  +F  +    VPR +N  AD LAN
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLAN

Q9HSF6 Ribonuclease HI6.7e-0941.86Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLA
        +NN A+Y ALI  L+ A + G   IE+ GDS+L+   L+  +D     L+     AR+L+  FD   + HVPR  N+RAD LAN A
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLA

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.8e-0940Show/hide
Query:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE
        + +NN A+Y ALI+GL+ A+E G   I++ GDSKL+   +  Q+ + HE L      A+ L  K  S  + HV R  N  AD  ANLA  L   E
Subjt:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.9e-0833.71Show/hide
Query:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTL
        +NN+A+Y+AL++GL+ AL+ G   + + GDS L+   +   +   H  +      A++LM  F +  + H+ R KN  AD  AN A  L
Subjt:  SNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTL

AT5G51080.1 RNase H family protein2.4e-0937.89Show/hide
Query:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE
        + +NN A+Y  LI+GL+ A+E G + I++  DSKL+   +  Q+ + HE L      A+QL +K  S  + HV R+ N  AD  AN+A  L+  E
Subjt:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE

AT5G51080.2 RNase H family protein2.4e-0937.89Show/hide
Query:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE
        + +NN A+Y  LI+GL+ A+E G + I++  DSKL+   +  Q+ + HE L      A+QL +K  S  + HV R+ N  AD  AN+A  L+  E
Subjt:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE

AT5G51080.3 RNase H family protein2.4e-0937.89Show/hide
Query:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE
        + +NN A+Y  LI+GL+ A+E G + I++  DSKL+   +  Q+ + HE L      A+QL +K  S  + HV R+ N  AD  AN+A  L+  E
Subjt:  LCSNNMAQYQALIIGLQMALEIGVSFIEIYGDSKLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATTTTCAAAGAAGGTGAAACCTCATGTCATCACACCACCATTATTGAGGAATCAGAGATTGGAACTCCTGAAGAAGATGCGGAAGATGTCCTACAGAGTTTAGA
AGATGGTGGCCAATCTACTGTAGATGAGCTAAAAGAGGTGAACCTTGGTACAGTAGAGGAACCACGCCTAACTTTCATTAGTGCATCTCTCTCTAGTGAAAAGGAGGGTA
AGTACATGAGTTTACTCACTAAGTACAGAGACATCTTTGCTTGGTCGTACAAGGAGAAGCCAAGACTTGATCCAAAAGTAGCAGTCCATAATCTCACAATCAAACAAGGG
TATCGACTGATTAAGCAAATAGCAAACGTTGTCCCTATCAGAAGAAAGAATGAGCAACTTTGCTTGAGGCATTATATGCAAGCCTTCACGGTTCATCTAGTAGCAAAGGC
AGACCCTATAAAGTATGTTCTATCCAGGCCAATTATCTCTGGACGCTTAGCCAAATGGGCAGTTCTACTCCAAAAATATGACATTAAACATATGTTACCTTATAGCTTTA
CGCTCGCTGAATTGTGCTCGAACAATATGGCTCAATATCAGGCCTTAATAATTGGCCTTCAAATGGCATTGGAGATCGGAGTATCATTCATAGAAATTTATGGTGATTCA
AAGTTGATAATCAATCTGCTATCGCTTCAGTATGACATGAAACACGAATACTTAAAGCCATACTTTACTTATGCTCGACAATTGATGGAAAAGTTTGATAGTGTAATGCT
GGTACATGTCCCTAGAACAAAAAACAAGAGAGCGGACACATTAGCAAATTTGGCTACTACCTTAACAATGTCGGAGAATATAACCTTAAATATATCGCTTTGTCAACGAC
GGATTATGCCTGCAATTTTTTCTGAATGTCAGAAAGCGAACATCATGATGGATAATGGGGGGCAATTCTTCTATAGCATGATAGACAAATTATGTGAAAATTCAAATTCA
AGTAATACAAGTCATCCATGTACAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCATTTTCAAAGAAGGTGAAACCTCATGTCATCACACCACCATTATTGAGGAATCAGAGATTGGAACTCCTGAAGAAGATGCGGAAGATGTCCTACAGAGTTTAGA
AGATGGTGGCCAATCTACTGTAGATGAGCTAAAAGAGGTGAACCTTGGTACAGTAGAGGAACCACGCCTAACTTTCATTAGTGCATCTCTCTCTAGTGAAAAGGAGGGTA
AGTACATGAGTTTACTCACTAAGTACAGAGACATCTTTGCTTGGTCGTACAAGGAGAAGCCAAGACTTGATCCAAAAGTAGCAGTCCATAATCTCACAATCAAACAAGGG
TATCGACTGATTAAGCAAATAGCAAACGTTGTCCCTATCAGAAGAAAGAATGAGCAACTTTGCTTGAGGCATTATATGCAAGCCTTCACGGTTCATCTAGTAGCAAAGGC
AGACCCTATAAAGTATGTTCTATCCAGGCCAATTATCTCTGGACGCTTAGCCAAATGGGCAGTTCTACTCCAAAAATATGACATTAAACATATGTTACCTTATAGCTTTA
CGCTCGCTGAATTGTGCTCGAACAATATGGCTCAATATCAGGCCTTAATAATTGGCCTTCAAATGGCATTGGAGATCGGAGTATCATTCATAGAAATTTATGGTGATTCA
AAGTTGATAATCAATCTGCTATCGCTTCAGTATGACATGAAACACGAATACTTAAAGCCATACTTTACTTATGCTCGACAATTGATGGAAAAGTTTGATAGTGTAATGCT
GGTACATGTCCCTAGAACAAAAAACAAGAGAGCGGACACATTAGCAAATTTGGCTACTACCTTAACAATGTCGGAGAATATAACCTTAAATATATCGCTTTGTCAACGAC
GGATTATGCCTGCAATTTTTTCTGAATGTCAGAAAGCGAACATCATGATGGATAATGGGGGGCAATTCTTCTATAGCATGATAGACAAATTATGTGAAAATTCAAATTCA
AGTAATACAAGTCATCCATGTACAATGTAG
Protein sequenceShow/hide protein sequence
MTIFKEGETSCHHTTIIEESEIGTPEEDAEDVLQSLEDGGQSTVDELKEVNLGTVEEPRLTFISASLSSEKEGKYMSLLTKYRDIFAWSYKEKPRLDPKVAVHNLTIKQG
YRLIKQIANVVPIRRKNEQLCLRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAVLLQKYDIKHMLPYSFTLAELCSNNMAQYQALIIGLQMALEIGVSFIEIYGDS
KLIINLLSLQYDMKHEYLKPYFTYARQLMEKFDSVMLVHVPRTKNKRADTLANLATTLTMSENITLNISLCQRRIMPAIFSECQKANIMMDNGGQFFYSMIDKLCENSNS
SNTSHPCTM