; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017074 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017074
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr02:20735274..20736343
RNA-Seq ExpressionPay0017074
SyntenyPay0017074
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR025724 - GAG-pre-integrase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.4e-9171.26Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN-----------------------------------VISSKST
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV +L S+VAL TT+LRQ N                                   VISS ST
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN-----------------------------------VISSKST

Query:  ALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHL
        ALAVTP TSWLLDS  CNHMTSGISLLSSHI V SLPP+H  DG+HMSISHI TDSQ GQVIGTG+K+GR FELTSLQHS +FPAIS   TD+TIFQWHL
Subjt:  ALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHL

Query:  RLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        RLGHASSDKLRSLAS G LNNVSKFST D LNCKLAKQ ALSFPNSASLCDK FGLIHSDI
Subjt:  RLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.7e-8654.21Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV SL S+VAL TTHLRQAN                                          
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------

Query:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI
                                                    VISS+STALAVTP TSWLLDSACCNHMTS ISLLSSHI VQSLPP+H ADGN MSI
Subjt:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI

Query:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA
        SHI T                                            DSQ GQVIGTGRK+GR FELTSLQHSPVFPAIS  VTDNT+FQWHLRLGHA
Subjt:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA

Query:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        SS+KLRSL STG+LNNVS+F+TFDCL+CK+AKQPALSFP SASLCDK FGLIHSDI
Subjt:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

KAA0058218.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.7e-9997.93Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
        MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS

Query:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTF
        LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVS   +F
Subjt:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTF

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.7e-8654.21Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV SL S+VAL TTHLRQAN                                          
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------

Query:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI
                                                    VISS+STALAVTP TSWLLDSACCNHMTS ISLLSSHI VQSLPP+H ADGN MSI
Subjt:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI

Query:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA
        SHI T                                            DSQ GQVIGTGRK+GR FELTSLQHSPVFPAIS  VTDNT+FQWHLRLGHA
Subjt:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA

Query:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        SS+KLRSL STG+LNNVS+F+TFDCL+CK+AKQPALSFP SASLCDK FGLIHSDI
Subjt:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

XP_008453699.1 PREDICTED: uncharacterized protein LOC103494348 [Cucumis melo]1.7e-122100Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
        MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS

Query:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL
        LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL
Subjt:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL

Query:  AKQPALSFPNSASLCDKRFGLIHSDI
        AKQPALSFPNSASLCDKRFGLIHSDI
Subjt:  AKQPALSFPNSASLCDKRFGLIHSDI

TrEMBL top hitse value%identityAlignment
A0A1S3BWW1 uncharacterized protein LOC1034943488.2e-123100Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
        MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS

Query:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL
        LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL
Subjt:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKL

Query:  AKQPALSFPNSASLCDKRFGLIHSDI
        AKQPALSFPNSASLCDKRFGLIHSDI
Subjt:  AKQPALSFPNSASLCDKRFGLIHSDI

A0A5A7UST2 Retrovirus-related Pol polyprotein from transposon TNT 1-943.7e-9997.93Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
        MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQS

Query:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTF
        LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVS   +F
Subjt:  LPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTF

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-944.7e-8654.21Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV SL S+VAL TTHLRQAN                                          
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------

Query:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI
                                                    VISS+STALAVTP TSWLLDSACCNHMTS ISLLSSHI VQSLPP+H ADGN MSI
Subjt:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI

Query:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA
        SHI T                                            DSQ GQVIGTGRK+GR FELTSLQHSPVFPAIS  VTDNT+FQWHLRLGHA
Subjt:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA

Query:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        SS+KLRSL STG+LNNVS+F+TFDCL+CK+AKQPALSFP SASLCDK FGLIHSDI
Subjt:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

A0A5D3CPU5 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-9171.26Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN-----------------------------------VISSKST
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV +L S+VAL TT+LRQ N                                   VISS ST
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN-----------------------------------VISSKST

Query:  ALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHL
        ALAVTP TSWLLDS  CNHMTSGISLLSSHI V SLPP+H  DG+HMSISHI TDSQ GQVIGTG+K+GR FELTSLQHS +FPAIS   TD+TIFQWHL
Subjt:  ALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHL

Query:  RLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        RLGHASSDKLRSLAS G LNNVSKFST D LNCKLAKQ ALSFPNSASLCDK FGLIHSDI
Subjt:  RLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-944.7e-8654.21Show/hide
Query:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------
        MGLRP+YESVRAALLHRNPLPSLDA +QEILF+EKR+ IV SL S+VAL TTHLRQAN                                          
Subjt:  MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQAN------------------------------------------

Query:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI
                                                    VISS+STALAVTP TSWLLDSACCNHMTS ISLLSSHI VQSLPP+H ADGN MSI
Subjt:  --------------------------------------------VISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGNHMSI

Query:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA
        SHI T                                            DSQ GQVIGTGRK+GR FELTSLQHSPVFPAIS  VTDNT+FQWHLRLGHA
Subjt:  SHIDT--------------------------------------------DSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHA

Query:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI
        SS+KLRSL STG+LNNVS+F+TFDCL+CK+AKQPALSFP SASLCDK FGLIHSDI
Subjt:  SSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFGLIHSDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCCGACCAAAATATGAATCCGTTCGTGCTGCTCTGTTACATCGCAACCCTCTGCCATCTCTTGACGCTGATATTCAGGAAATCTTATTTAAGGAGAAAAGAGT
TAGCATTGTCTTCTCTTTGTCCTCTAACGTCGCTCTCGACACTACTCATCTCCGACAGGCTAATGTGATCTCTTCCAAATCTACTGCTCTTGCTGTCACCCCAGATACCT
CTTGGCTCCTTGACTCGGCTTGTTGCAATCACATGACTTCTGGCATTTCATTGTTATCCTCTCATATTTCTGTTCAATCACTTCCTCCAGTTCACTTTGCTGATGGTAAT
CACATGTCTATTTCTCACATTGACACTGATTCTCAGATAGGACAAGTGATTGGTACGGGACGGAAGATGGGTCGATCATTTGAGCTCACATCTCTCCAGCATTCTCCTGT
GTTCCCAGCCATCTCTACTCTAGTCACTGATAACACTATATTTCAGTGGCATCTTCGTCTAGGTCATGCATCCTCTGATAAACTCCGTAGTTTAGCTTCTACTGGCATTT
TGAATAATGTTTCTAAGTTTAGCACTTTTGACTGTTTAAATTGCAAACTTGCGAAACAACCTGCTTTGTCCTTTCCTAATTCTGCTTCTTTATGTGATAAACGTTTTGGC
CTAATTCACTCTGATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCCGACCAAAATATGAATCCGTTCGTGCTGCTCTGTTACATCGCAACCCTCTGCCATCTCTTGACGCTGATATTCAGGAAATCTTATTTAAGGAGAAAAGAGT
TAGCATTGTCTTCTCTTTGTCCTCTAACGTCGCTCTCGACACTACTCATCTCCGACAGGCTAATGTGATCTCTTCCAAATCTACTGCTCTTGCTGTCACCCCAGATACCT
CTTGGCTCCTTGACTCGGCTTGTTGCAATCACATGACTTCTGGCATTTCATTGTTATCCTCTCATATTTCTGTTCAATCACTTCCTCCAGTTCACTTTGCTGATGGTAAT
CACATGTCTATTTCTCACATTGACACTGATTCTCAGATAGGACAAGTGATTGGTACGGGACGGAAGATGGGTCGATCATTTGAGCTCACATCTCTCCAGCATTCTCCTGT
GTTCCCAGCCATCTCTACTCTAGTCACTGATAACACTATATTTCAGTGGCATCTTCGTCTAGGTCATGCATCCTCTGATAAACTCCGTAGTTTAGCTTCTACTGGCATTT
TGAATAATGTTTCTAAGTTTAGCACTTTTGACTGTTTAAATTGCAAACTTGCGAAACAACCTGCTTTGTCCTTTCCTAATTCTGCTTCTTTATGTGATAAACGTTTTGGC
CTAATTCACTCTGATATTTGA
Protein sequenceShow/hide protein sequence
MGLRPKYESVRAALLHRNPLPSLDADIQEILFKEKRVSIVFSLSSNVALDTTHLRQANVISSKSTALAVTPDTSWLLDSACCNHMTSGISLLSSHISVQSLPPVHFADGN
HMSISHIDTDSQIGQVIGTGRKMGRSFELTSLQHSPVFPAISTLVTDNTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSASLCDKRFG
LIHSDI