; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017097 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017097
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:12888055..12888519
RNA-Seq ExpressionPay0017097
SyntenyPay0017097
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035949.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.8e-6085.71Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KS IK TE AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF +MF LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHSANL+ HKG GK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

KAA0041280.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.4e-6186.39Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KSTIK TE AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF + F LNSLPS+YGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHSANL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.1e-5985.03Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N K TIK TE AKEFMKSV+KC QSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF +MF LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHS NL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

TYK29929.1 UBN2 domain-containing protein [Cucumis melo var. makuwa]2.8e-6085.71Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KSTIK  E AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF + F LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQS+LIQEE RLKKPIIHSANL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

XP_016902061.1 PREDICTED: uncharacterized protein LOC107991516 [Cucumis melo]7.8e-79100Show/hide
Query:  MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY
        MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY
Subjt:  MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY

Query:  NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN
        NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN
Subjt:  NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN

TrEMBL top hitse value%identityAlignment
A0A1S4E1F8 uncharacterized protein LOC1079915163.8e-79100Show/hide
Query:  MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY
        MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY
Subjt:  MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNY

Query:  NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN
        NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN
Subjt:  NILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN

A0A5A7T3G8 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-6085.71Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KS IK TE AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF +MF LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHSANL+ HKG GK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

A0A5A7TD98 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-6186.39Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KSTIK TE AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF + F LNSLPS+YGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHSANL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

A0A5D3C256 Copia-like pol polyprotein5.1e-6085.03Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KSTIK TE AKEFMKSVEKCSQSE  +KSL GTLMSTLTNIKFDGSRTIHE+ILEM NL AR  TMRMEVNENF + F LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQSMLIQEE RLKKPIIHS NL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

A0A5D3E2D2 UBN2 domain-containing protein1.4e-6085.71Show/hide
Query:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN
        MTVA N KSTIK  E AKEFMKSVEKCSQSE  +KSLAGTLMSTLTNIKFDGSRTIHEHILEM NL AR KTM MEVNENF + F LNSLPSEYGPFHMN
Subjt:  MTVATN-KSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMN

Query:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK
        YN LKDKWNVHELQS+LIQEE RLKKPIIHSANL+GHKGAGK+PGKK
Subjt:  YNILKDKWNVHELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTAGCAACAAATAAGTCCACAATTAAGAGAACTGAATATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCAGAGTTGACTAATAAGTCACTTGC
TGGAACACTTATGAGTACTTTAACCAACATCAAATTTGATGGTTCTCGTACTATACATGAGCATATCCTTGAAATGATGAACTTGATAGCAAGATTTAAGACCATGAGAA
TGGAAGTTAATGAGAATTTTTTTATAATGTTTAACCTTAATTCCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACATTCTAAAAGATAAATGGAATGTGCAT
GAATTACAAAGTATGCTCATTCAAGAGGAAGTGAGGCTTAAGAAACCAATAATTCACTCTGCCAATCTCATAGGTCACAAAGGAGCTGGAAAGAGACCTGGAAAAAAGAT
GGAAAGGGCAATTATGGACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTAGCAACAAATAAGTCCACAATTAAGAGAACTGAATATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCAGAGTTGACTAATAAGTCACTTGC
TGGAACACTTATGAGTACTTTAACCAACATCAAATTTGATGGTTCTCGTACTATACATGAGCATATCCTTGAAATGATGAACTTGATAGCAAGATTTAAGACCATGAGAA
TGGAAGTTAATGAGAATTTTTTTATAATGTTTAACCTTAATTCCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACATTCTAAAAGATAAATGGAATGTGCAT
GAATTACAAAGTATGCTCATTCAAGAGGAAGTGAGGCTTAAGAAACCAATAATTCACTCTGCCAATCTCATAGGTCACAAAGGAGCTGGAAAGAGACCTGGAAAAAAGAT
GGAAAGGGCAATTATGGACAATTAA
Protein sequenceShow/hide protein sequence
MTVATNKSTIKRTEYAKEFMKSVEKCSQSELTNKSLAGTLMSTLTNIKFDGSRTIHEHILEMMNLIARFKTMRMEVNENFFIMFNLNSLPSEYGPFHMNYNILKDKWNVH
ELQSMLIQEEVRLKKPIIHSANLIGHKGAGKRPGKKMERAIMDN