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Pay0017142 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017142
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:6072162..6072512
RNA-Seq ExpressionPay0017142
SyntenyPay0017142
Gene Ontology termsGO:0006955 - immune response (biological process)
GO:0015074 - DNA integration (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052183.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.8e-5490.52Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MNLNEKLQQNDGAEM D  RF+SFVGGLIYLTHT HDISYSIGVISRFMQCPSRDHFDAAK+VMRYI  TIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

KAA0055915.1 copia protein [Cucumis melo var. makuwa]4.9e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA AQRFRS VGGLIYLTHT  DISYSI VIS FMQCPSRDHF A KRVMRYI GTIEYG+WYSKVSD KLC F DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

TYK27736.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]8.9e-5187.93Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA+AQRFRS VGGLIYLTHT  DISYSIGVI +FMQ PSRDHF AAKRVMRYI GTIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLG G+IT
Subjt:  RSVSANVFTLGSGIIT

TYK28116.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]5.2e-5188.79Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA AQRFRSFVGGLIYLTHT  DISYSI VIS FMQCPSRDHF A KRVMRYI GTIEYGIWYSKVSD KLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

XP_016902732.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.8e-5490.52Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MNLNEKLQQNDGAEM D  RF+SFVGGLIYLTHT HDISYSIGVISRFMQCPSRDHFDAAK+VMRYI  TIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

TrEMBL top hitse value%identityAlignment
A0A1S4E3C8 uncharacterized mitochondrial protein AtMg00810-like1.9e-5490.52Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MNLNEKLQQNDGAEM D  RF+SFVGGLIYLTHT HDISYSIGVISRFMQCPSRDHFDAAK+VMRYI  TIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

A0A5A7UQM0 Copia protein2.4e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA AQRFRS VGGLIYLTHT  DISYSI VIS FMQCPSRDHF A KRVMRYI GTIEYG+WYSKVSD KLC F DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

A0A5D3BFF7 Putative mitochondrial protein1.9e-5490.52Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MNLNEKLQQNDGAEM D  RF+SFVGGLIYLTHT HDISYSIGVISRFMQCPSRDHFDAAK+VMRYI  TIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

A0A5D3DVG4 Putative gag-pol polyprotein, identical4.3e-5187.93Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA+AQRFRS VGGLIYLTHT  DISYSIGVI +FMQ PSRDHF AAKRVMRYI GTIEYGIWYSKVSDFKLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLG G+IT
Subjt:  RSVSANVFTLGSGIIT

A0A5D3DWI5 Zinc finger, CCHC-type2.5e-5188.79Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        MN+NEKLQQNDGAEMA AQRFRSFVGGLIYLTHT  DISYSI VIS FMQCPSRDHF A KRVMRYI GTIEYGIWYSKVSD KLCGF DSDW SSLDDR
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLGSGIIT
        RSVSANVFTLGSG+IT
Subjt:  RSVSANVFTLGSGIIT

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.2e-1336.08Show/hide
Query:  FRSFVGGLIYL-THTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGSGIIT
        + S VG ++YL   T  D++ ++GV+S+F   P   H+ A KRV+RY+  T  YG+ +++    KL G++D+DW   ++ RRS S  +F L  G ++
Subjt:  FRSFVGGLIYL-THTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGSGIIT

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.5e-1135.05Show/hide
Query:  FRSFVGGLIY-LTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGSGIIT
        + S VG L+Y +  T  DI++++GV+SRF++ P ++H++A K ++RY+ GT    + +   SD  L G+ D+D    +D+R+S +  +FT   G I+
Subjt:  FRSFVGGLIY-LTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGSGIIT

P92519 Uncharacterized mitochondrial protein AtMg008102.1e-1541.35Show/hide
Query:  AEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGS
        A+  D   FRS VG L YLT T  DISY++ ++ + M  P+   FD  KRV+RY+ GTI +G++  K S   +  F DSDW      RRS +     LG 
Subjt:  AEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGS

Query:  GIIT
         II+
Subjt:  GIIT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-1636.79Show/hide
Query:  KLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSA
        KL    G ++ D   +R  VG L YL  T  DISY++  +S+FM  P+ +H  A KR++RY+ GT  +GI+  K +   L  ++D+DW    DD  S + 
Subjt:  KLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSA

Query:  NVFTLG
         +  LG
Subjt:  NVFTLG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.1e-1736.04Show/hide
Query:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR
        M  + KL  + G ++ D   +R  VG L YL  T  D+SY++  +S++M  P+ DH++A KRV+RY+ GT ++GI+  K +   L  ++D+DW    DD 
Subjt:  MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDR

Query:  RSVSANVFTLG
         S +  +  LG
Subjt:  RSVSANVFTLG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.4e-1532.71Show/hide
Query:  NDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFT
        + G +  DA+ +R  +G L+YL  T  DIS+++  +S+F + P   H  A  +++ YI GT+  G++YS  ++ +L  F+D+ + S  D RRS +     
Subjt:  NDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFT

Query:  LGSGIIT
        LG+ +I+
Subjt:  LGSGIIT

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.7e-1239.47Show/hide
Query:  IYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVS
        +YLT T  D+++++  +S+F          A  +V+ Y+ GT+  G++YS  SD +L  FADSDW S  D RRSV+
Subjt:  IYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVS

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-1641.35Show/hide
Query:  AEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGS
        A+  D   FRS VG L YLT T  DISY++ ++ + M  P+   FD  KRV+RY+ GTI +G++  K S   +  F DSDW      RRS +     LG 
Subjt:  AEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTLGS

Query:  GIIT
         II+
Subjt:  GIIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGAATGAAAAGCTGCAACAAAATGATGGTGCAGAGATGGCCGATGCGCAGCGGTTTAGAAGCTTTGTTGGAGGCTTGATTTATCTAACTCATACCCATCATGA
TATTTCGTATTCTATTGGTGTGATTTCTAGGTTTATGCAATGTCCTTCAAGAGATCATTTCGACGCAGCAAAGCGGGTTATGCGATACATTACTGGAACTATAGAATATG
GCATTTGGTACTCTAAAGTTTCTGATTTCAAATTATGCGGGTTCGCAGATAGTGATTGGGTGAGCTCCTTGGATGATAGGCGAAGTGTTTCAGCGAATGTTTTCACTTTA
GGGTCAGGAATTATTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGAATGAAAAGCTGCAACAAAATGATGGTGCAGAGATGGCCGATGCGCAGCGGTTTAGAAGCTTTGTTGGAGGCTTGATTTATCTAACTCATACCCATCATGA
TATTTCGTATTCTATTGGTGTGATTTCTAGGTTTATGCAATGTCCTTCAAGAGATCATTTCGACGCAGCAAAGCGGGTTATGCGATACATTACTGGAACTATAGAATATG
GCATTTGGTACTCTAAAGTTTCTGATTTCAAATTATGCGGGTTCGCAGATAGTGATTGGGTGAGCTCCTTGGATGATAGGCGAAGTGTTTCAGCGAATGTTTTCACTTTA
GGGTCAGGAATTATTACTTAG
Protein sequenceShow/hide protein sequence
MNLNEKLQQNDGAEMADAQRFRSFVGGLIYLTHTHHDISYSIGVISRFMQCPSRDHFDAAKRVMRYITGTIEYGIWYSKVSDFKLCGFADSDWVSSLDDRRSVSANVFTL
GSGIIT