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Pay0017228 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017228
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr03:17554715..17564682
RNA-Seq ExpressionPay0017228
SyntenyPay0017228
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]1.2e-5660.22Show/hide
Query:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI
        MFLVRL+ F+PL DATS LAQ+A++AD+KFTPL   II SNRSP+FVA LQ++   F N+ VD++ +S++SL+ FHDA+LDGG+  SMTIHLL    Q++
Subjt:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI

Query:  LRFESSSH-APKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ S++LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFESSSH-APKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]3.6e-114100Show/hide
Query:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
        MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
Subjt:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ

Query:  LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE
        LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE
Subjt:  LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE

Query:  VDVAVEAMDDPMS
        VDVAVEAMDDPMS
Subjt:  VDVAVEAMDDPMS

XP_023000630.1 uncharacterized protein LOC111494874 [Cucurbita maxima]1.1e-5458.79Show/hide
Query:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL
        +MFLVRLK+F PL D TSRLAQIARE+DI FTPL   +  S  SPRF+A LQ+ H CF  Y V+ DH SRISLES HDALLD G+S +MTIHLL N   +
Subjt:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL

Query:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK
        +LRFE+ +H P++ H+  L P QE+ + E++Y+K  ++DS+DLR+VI+ LP+FHGDS+CVT T S+V+FSIAS+E++  KEK
Subjt:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK

XP_023514484.1 uncharacterized protein LOC111778743 [Cucurbita pepo subsp. pepo]2.7e-5357.69Show/hide
Query:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL
        +MFLVR+K+F PL D TSRLAQI RE+DI FTPL   +  S  SPRF+A LQ+ H CF  Y V+ DH SRISLES HDALLD G+S SMTIHLL N   +
Subjt:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL

Query:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK
        +LRFE+ +H P++ H++ L P QE+ + E++Y+K  ++DS+DLR+VI+ LP+F GDS+CVT T S+V+FSIAS+E++  KEK
Subjt:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]1.0e-8180.79Show/hide
Query:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI
        MFLVRLK+F+P F ATSRLA IAREAD+KFTPLFFSI  SN+ PRFVAYL MT++CFINYKVDNDHTSRISLESFHDALLDGG SPSMTIHLLANI Q+I
Subjt:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI

Query:  LRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEEVD
        LRFESSSHAP+V HELSL PSQEEDLGE+DYAKFFSIDSK LRRVIRNLPIFHGDSICVTAT SQVKFSIASKEIVLTKE +  I    I G   EEE  
Subjt:  LRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEEVD

Query:  VAV
        + +
Subjt:  VAV

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980105.6e-5760.22Show/hide
Query:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI
        MFLVRL+ F+PL DATS LAQ+A++AD+KFTPL   II SNRSP+FVA LQ++   F N+ VD++ +S++SL+ FHDA+LDGG+  SMTIHLL    Q++
Subjt:  MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLI

Query:  LRFESSSH-APKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ S++LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFESSSH-APKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE

A0A1S4E4N8 uncharacterized protein LOC1035022631.7e-114100Show/hide
Query:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
        MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
Subjt:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ

Query:  LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE
        LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE
Subjt:  LILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEE

Query:  VDVAVEAMDDPMS
        VDVAVEAMDDPMS
Subjt:  VDVAVEAMDDPMS

A0A5D3DZC5 Uncharacterized protein4.9e-53100Show/hide
Query:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
        MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ
Subjt:  MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQ

Query:  LILRFESSS
        LILRFESSS
Subjt:  LILRFESSS

A0A6J1HGU2 uncharacterized protein LOC1114642094.9e-5357.69Show/hide
Query:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL
        +MFLVR+K+F PL D TSRLAQIARE+DI FTPL   +  S  SPRF+A LQ+ H CF  Y V+ DH SRISLES HDALLD G+S SMTIHLL N   +
Subjt:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL

Query:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK
         LRFE+ +H P++ H++ L P QE+ + E++Y+K  ++D +DLR+VI+ LP+F GDS+CVT T S+V+FSIAS+E++  KEK
Subjt:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK

A0A6J1KIW5 uncharacterized protein LOC1114948745.3e-5558.79Show/hide
Query:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL
        +MFLVRLK+F PL D TSRLAQIARE+DI FTPL   +  S  SPRF+A LQ+ H CF  Y V+ DH SRISLES HDALLD G+S +MTIHLL N   +
Subjt:  AMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQL

Query:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK
        +LRFE+ +H P++ H+  L P QE+ + E++Y+K  ++DS+DLR+VI+ LP+FHGDS+CVT T S+V+FSIAS+E++  KEK
Subjt:  ILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGTTCTTAGTGAGGCTTAAAGACTTTGATCCTCTTTTTGATGCAACTTCTCGTCTTGCTCAAATTGCTAGAGAAGCCGATATCAAATTCACACCATTATTCTT
TTCAATAATTGCTTCCAATCGATCCCCTCGTTTTGTTGCATATCTTCAAATGACTCACCATTGCTTCATCAATTACAAAGTCGATAATGATCATACCTCAAGAATTTCCC
TCGAATCTTTCCATGACGCTCTCTTGGACGGCGGCGCTTCTCCTTCAATGACTATTCATCTTCTCGCAAACATTAAGCAATTGATCCTTAGATTTGAATCTTCGAGCCAT
GCCCCGAAAGTGCATCATGAATTGTCATTGACACCGTCGCAAGAAGAAGATCTAGGAGAAGTTGATTATGCAAAATTTTTCTCAATTGATTCGAAGGATTTAAGGCGTGT
TATAAGAAATTTACCTATATTCCACGGGGACTCAATATGTGTTACTGCAACGGGGTCACAAGTCAAATTCTCTATTGCTTCTAAAGAGATTGTTCTTACTAAAGAGAAGA
AGCTCTTCATATGTAATCCTCCTATAGAGGGTGATATGATGGAAGAAGAGGTGGACGTGGCAGTAGAGGCAATGGACGATCCAATGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGTTCTTAGTGAGGCTTAAAGACTTTGATCCTCTTTTTGATGCAACTTCTCGTCTTGCTCAAATTGCTAGAGAAGCCGATATCAAATTCACACCATTATTCTT
TTCAATAATTGCTTCCAATCGATCCCCTCGTTTTGTTGCATATCTTCAAATGACTCACCATTGCTTCATCAATTACAAAGTCGATAATGATCATACCTCAAGAATTTCCC
TCGAATCTTTCCATGACGCTCTCTTGGACGGCGGCGCTTCTCCTTCAATGACTATTCATCTTCTCGCAAACATTAAGCAATTGATCCTTAGATTTGAATCTTCGAGCCAT
GCCCCGAAAGTGCATCATGAATTGTCATTGACACCGTCGCAAGAAGAAGATCTAGGAGAAGTTGATTATGCAAAATTTTTCTCAATTGATTCGAAGGATTTAAGGCGTGT
TATAAGAAATTTACCTATATTCCACGGGGACTCAATATGTGTTACTGCAACGGGGTCACAAGTCAAATTCTCTATTGCTTCTAAAGAGATTGTTCTTACTAAAGAGAAGA
AGCTCTTCATATGTAATCCTCCTATAGAGGGTGATATGATGGAAGAAGAGGTGGACGTGGCAGTAGAGGCAATGGACGATCCAATGTCGTAA
Protein sequenceShow/hide protein sequence
MAMFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLILRFESSSH
APKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKEKKLFICNPPIEGDMMEEEVDVAVEAMDDPMS