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Pay0017360 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017360
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:27515031..27515366
RNA-Seq ExpressionPay0017360
SyntenyPay0017360
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036760.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-4190.2Show/hide
Query:  ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLE
        IL+DLIKALN AFALKDLGALSYFL VEV YPTNGGMFLSQ KYIT+LLQKTKMIEAKPIST MVSGQLV AHQGENFHDVYLYRSTVGAL YATLTH E
Subjt:  ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLE

Query:  IS
        IS
Subjt:  IS

KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.5e-4486.11Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MG+S+K+LNDLI+ALN  FALKDLGALSYFLGVEVSYPTNGGMFLSQ KYITDLLQKTKM +AKPIST MVSGQLV AHQGENFHD++LYR TVGALQYA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLTH EIS
Subjt:  TLTHLEIS

KAA0046194.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-3978.57Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVG----A
        MGDS K+LNDL +ALN  F+LKDLG LSYFLG+EVSYPTNGGMFLSQ KYITDLLQKTK+ +AKPIST MVSGQLV AHQGENFH ++LYRSTVG    A
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVG----A

Query:  LQYATLTHLEIS
        LQYAT+TH EIS
Subjt:  LQYATLTHLEIS

XP_016901594.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.1e-4590.74Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MGDSEKIL+DLIKALN AFALKDLGALSYFL VEV YPTNGGMFLSQ KYIT+LLQKTKMIEAKPIST MVSGQLV AHQGENFHDVYLYRSTVGAL YA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLTH EIS
Subjt:  TLTHLEIS

XP_016903382.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.8e-54100Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEISKCK
        TLTHLEISKCK
Subjt:  TLTHLEISKCK

TrEMBL top hitse value%identityAlignment
A0A1S4E057 uncharacterized mitochondrial protein AtMg00810-like2.0e-4590.74Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MGDSEKIL+DLIKALN AFALKDLGALSYFL VEV YPTNGGMFLSQ KYIT+LLQKTKMIEAKPIST MVSGQLV AHQGENFHDVYLYRSTVGAL YA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLTH EIS
Subjt:  TLTHLEIS

A0A1S4E584 uncharacterized mitochondrial protein AtMg00810-like2.3e-54100Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEISKCK
        TLTHLEISKCK
Subjt:  TLTHLEISKCK

A0A5A7T077 Putative mitochondrial protein1.0e-4190.2Show/hide
Query:  ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLE
        IL+DLIKALN AFALKDLGALSYFL VEV YPTNGGMFLSQ KYIT+LLQKTKMIEAKPIST MVSGQLV AHQGENFHDVYLYRSTVGAL YATLTH E
Subjt:  ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLE

Query:  IS
        IS
Subjt:  IS

A0A5A7TT17 Putative mitochondrial protein5.6e-4078.57Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVG----A
        MGDS K+LNDL +ALN  F+LKDLG LSYFLG+EVSYPTNGGMFLSQ KYITDLLQKTK+ +AKPIST MVSGQLV AHQGENFH ++LYRSTVG    A
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVG----A

Query:  LQYATLTHLEIS
        LQYAT+TH EIS
Subjt:  LQYATLTHLEIS

A0A5D3DK36 Putative mitochondrial protein1.7e-4486.11Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        MG+S+K+LNDLI+ALN  FALKDLGALSYFLGVEVSYPTNGGMFLSQ KYITDLLQKTKM +AKPIST MVSGQLV AHQGENFHD++LYR TVGALQYA
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLTH EIS
Subjt:  TLTHLEIS

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-0433.94Show/hide
Query:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVE-VSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFA--------HQGENFHDVYLYR
        +G  + ++  L   L+K+F +KDLG     LG++ V   T+  ++LSQ KYI  +L++  M  AKP+ST + +G L  +         +  N   V  Y 
Subjt:  MGDSEKILNDLIKALNKAFALKDLGALSYFLGVE-VSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFA--------HQGENFHDVYLYR

Query:  STVGALQYA
        S VG+L YA
Subjt:  STVGALQYA

P25600 Putative transposon Ty5-1 protein YCL074W3.3e-0528Show/hide
Query:  SEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLT
        S KI + + + L K +++KDLG +  FLG+ +   +NG + LS   YI     ++++   K   T + + + +F     +  D+  Y+S VG L +   T
Subjt:  SEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLT

P92519 Uncharacterized mitochondrial protein AtMg008103.3e-1341.67Show/hide
Query:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEV-SYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        G S  +LN LI  L+  F++KDLG + YFLG+++ ++P+  G+FLSQ KY   +L    M++ KP+ST +   +L  +     + D   +RS VGALQY 
Subjt:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEV-SYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLT  +IS
Subjt:  TLTHLEIS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.3e-1339.81Show/hide
Query:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEVS-YPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        G+   +L++ +  L++ F++KD   L YFLG+E    PT  G+ LSQ +YI DLL +T MI AKP++T M     +  + G    D   YR  VG+LQY 
Subjt:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEVS-YPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
          T  +IS
Subjt:  TLTHLEIS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.6e-1236.45Show/hide
Query:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYAT
        G+   +L   + AL++ F++K+   L YFLG+E       G+ LSQ +Y  DLL +T M+ AKP++T M +   +  H G    D   YR  VG+LQY  
Subjt:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYAT

Query:  LTHLEIS
         T  ++S
Subjt:  LTHLEIS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.4e-1336.79Show/hide
Query:  DSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATL
        +++  +++L   L   F L+DLG L YFLG+E++  +  G+ + Q KY  DLL +T ++  KP S  M       AH G +F D   YR  +G L Y  +
Subjt:  DSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATL

Query:  THLEIS
        T L+IS
Subjt:  THLEIS

ATMG00810.1 DNA/RNA polymerases superfamily protein2.3e-1441.67Show/hide
Query:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEV-SYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA
        G S  +LN LI  L+  F++KDLG + YFLG+++ ++P+  G+FLSQ KY   +L    M++ KP+ST +   +L  +     + D   +RS VGALQY 
Subjt:  GDSEKILNDLIKALNKAFALKDLGALSYFLGVEV-SYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYA

Query:  TLTHLEIS
        TLT  +IS
Subjt:  TLTHLEIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATTCTGAAAAGATTTTAAATGATCTAATTAAAGCTTTGAACAAGGCATTTGCTCTTAAAGACCTTGGAGCCCTTAGTTATTTCCTTGGAGTAGAGGTATCGTA
TCCTACAAATGGAGGTATGTTCTTATCCCAAGTAAAATATATTACTGATCTATTGCAGAAGACGAAAATGATTGAAGCAAAACCTATTTCAACTTCAATGGTAAGTGGAC
AGTTAGTATTTGCTCATCAAGGTGAAAATTTTCATGATGTATACTTGTACCGTAGTACTGTTGGAGCTTTACAGTATGCTACTCTTACACATCTTGAAATATCTAAGTGT
AAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATTCTGAAAAGATTTTAAATGATCTAATTAAAGCTTTGAACAAGGCATTTGCTCTTAAAGACCTTGGAGCCCTTAGTTATTTCCTTGGAGTAGAGGTATCGTA
TCCTACAAATGGAGGTATGTTCTTATCCCAAGTAAAATATATTACTGATCTATTGCAGAAGACGAAAATGATTGAAGCAAAACCTATTTCAACTTCAATGGTAAGTGGAC
AGTTAGTATTTGCTCATCAAGGTGAAAATTTTCATGATGTATACTTGTACCGTAGTACTGTTGGAGCTTTACAGTATGCTACTCTTACACATCTTGAAATATCTAAGTGT
AAATAA
Protein sequenceShow/hide protein sequence
MGDSEKILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKC
K