| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU47094.1 hypothetical protein TSUD_369270 [Trifolium subterraneum] | 1.6e-60 | 50.39 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP SFG+LYILLAVDYVSKWVEAIPTRTND+ VV+ F+ SNIF RFGIPR IISDQGTHFCNRT
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
LV+GK CHLPV+IEH+AYWA++ CN+ + EAG+++ L LQ+L+E RLEAYE+SRIYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK
EKTK HDK I RKEF +GQ+VLL+N S+KLM GKL+SKW PF V ++ G + IK
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK
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| KYP31222.1 Pol polyprotein [Cajanus cajan] | 1.3e-62 | 56.58 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRTL----------------VYGKPCHLPVEIE
+DFMGPFP SFG+ YILLAVDYVSKWVEA TRTND+ VV F+ SNIF RFG+PR I+SDQGTHFCNR++ V+GK CHLPVE+E
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRTL----------------VYGKPCHLPVEIE
Query: HKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSI
H+AYWA++ CN S+ +AGE++ L L EL E RLEAYENS+ YKEKTK HD I RK+F +GQKV LYN ++LM GKL+SKW PFVV ++ +G V I
Subjt: HKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSI
Query: KKRL--NSFVVTSKERSIIEPNRLNPRL
K SF V ++P NP L
Subjt: KKRL--NSFVVTSKERSIIEPNRLNPRL
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| RDY02854.1 Retrovirus-related Pol polyprotein, partial [Mucuna pruriens] | 7.3e-61 | 57.82 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT---------------------------LVY
+DFMGPFP S Y YILLAVDYVS+WVEAI TRTND+ VV FL SNIF RFG+P+ +ISDQG+HFCNR +V+
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT---------------------------LVY
Query: GKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVV
GK CHLPVE+EHKAYWA++QCNL+ +AGE++ LQEL E RLEAYENSRIYK+K K HD++ILRKEF +GQKVLL+N +KL+ GKL+S+W RPFV+
Subjt: GKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVV
Query: IDISTFGVVSI
+I G V +
Subjt: IDISTFGVVSI
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| XP_028798815.1 LOW QUALITY PROTEIN: uncharacterized protein LOC114754213 [Prosopis alba] | 9.6e-61 | 49.81 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP+SFGY+YILLAVDYVSKWVEAIPTRTNDS VV F+ S+IF RFGIPR IISDQGTHFCNR+
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
+V+GK CHLPVE+EHKAYWAI+ C+L L AG ++ L LQEL+E R EAYEN+RIYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIKK
E+TK +HDK ILR+EF +GQKVLLY +K MPGKL+S+W PF+V ++ +G V IK+
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIKK
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| XP_028802716.1 uncharacterized protein LOC114757797 [Prosopis alba] | 3.3e-61 | 50.19 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP+SFGY+YILLAVDYVSKWVEAIPTRTNDS VV F+ S+IF RFGIPR IISDQGTHFCNR+
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
+V+GK CHLPVE+EHKAYWAI+ C+L L AG ++ L LQEL+E R EAYEN+RIYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIKK
E+TK +HDK ILR+EF +GQKVLLY +KLMPGKL+S+W PF+V ++ +G V IK+
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151QLT1 Pol polyprotein | 6.5e-63 | 56.58 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRTL----------------VYGKPCHLPVEIE
+DFMGPFP SFG+ YILLAVDYVSKWVEA TRTND+ VV F+ SNIF RFG+PR I+SDQGTHFCNR++ V+GK CHLPVE+E
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRTL----------------VYGKPCHLPVEIE
Query: HKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSI
H+AYWA++ CN S+ +AGE++ L L EL E RLEAYENS+ YKEKTK HD I RK+F +GQKV LYN ++LM GKL+SKW PFVV ++ +G V I
Subjt: HKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSI
Query: KKRL--NSFVVTSKERSIIEPNRLNPRL
K SF V ++P NP L
Subjt: KKRL--NSFVVTSKERSIIEPNRLNPRL
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| A0A2Z6NS99 Integrase catalytic domain-containing protein | 7.9e-61 | 50.39 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP SFG+LYILLAVDYVSKWVEAIPTRTND+ VV+ F+ SNIF RFGIPR IISDQGTHFCNRT
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
LV+GK CHLPV+IEH+AYWA++ CN+ + EAG+++ L LQ+L+E RLEAYE+SRIYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK
EKTK HDK I RKEF +GQ+VLL+N S+KLM GKL+SKW PF V ++ G + IK
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK
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| A0A371HJF2 Retrovirus-related Pol polyprotein (Fragment) | 3.6e-61 | 57.82 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT---------------------------LVY
+DFMGPFP S Y YILLAVDYVS+WVEAI TRTND+ VV FL SNIF RFG+P+ +ISDQG+HFCNR +V+
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT---------------------------LVY
Query: GKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVV
GK CHLPVE+EHKAYWA++QCNL+ +AGE++ LQEL E RLEAYENSRIYK+K K HD++ILRKEF +GQKVLL+N +KL+ GKL+S+W RPFV+
Subjt: GKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYKEKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVV
Query: IDISTFGVVSI
+I G V +
Subjt: IDISTFGVVSI
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| A0A6P6TWR2 uncharacterized protein LOC113704658 | 1.5e-59 | 48.51 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP+SFG+LYILLAVDYVSKWVEA TRTNDS VV+ F+ SNIF RFG+PR I+SD+GTHFCNRT
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
LV+GKPCHLPVE EHKA+WAI+QCN++L EAG ++ L+LQEL+E R EAYEN+ IYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK--KRLNSFVV
EK++ HD++I RK FE+GQKVLLY +KL PGKL+S+W PF+V + +G V I+ K N FVV
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK--KRLNSFVV
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| A0A6P6V9E5 uncharacterized protein LOC113718514 | 1.5e-59 | 48.51 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
+DFMGPFP+SFG+LYILLAVDYVSKWVEA TRTNDS VV+ F+ SNIF RFG+PR I+SD+GTHFCNRT
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNRT------------------------------
Query: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
LV+GKPCHLPVE EHKA+WAI+QCN++L EAG ++ L+LQEL+E R EAYEN+ IYK
Subjt: -------------------------------------------LVYGKPCHLPVEIEHKAYWAIRQCNLSLLEAGEKKFLNLQELKEFRLEAYENSRIYK
Query: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK--KRLNSFVV
EK++ HD++I RK FE+GQKVLLY +KL PGKL+S+W PF+V + +G V I+ K N FVV
Subjt: EKTKLLHDKKILRKEFEIGQKVLLYNFSIKLMPGKLKSKWFRPFVVIDISTFGVVSIK--KRLNSFVV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A1Z651 Gag-Pol polyprotein | 4.0e-09 | 43.48 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
+DF P +GY Y+L+ VD S WVEA PT+ + VVS+ L+ +IF RFG+P+ + SD G F ++
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
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| P03356 Gag-Pol polyprotein | 6.8e-09 | 43.48 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
+DF P +GY Y+L+ VD S WVEA PT+ + VVS+ L+ IF RFG+P+ + SD G F ++
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
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| Q2F7J0 Gag-Pol polyprotein | 4.0e-09 | 43.48 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
+DF P +GY Y+L+ VD S WVEA PT+ + VVS+ L+ +IF RFG+P+ + SD G F ++
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
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| Q2F7J3 Gag-Pol polyprotein | 8.8e-09 | 42.03 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
+DF P +GY Y+L+ VD S WVEA PT+ + VV++ L+ +IF RFG+P+ + SD G F ++
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
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| Q7SVK7 Gag-pol polyprotein | 6.8e-09 | 43.48 | Show/hide |
Query: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
+DF P +GY Y+L+ VD S WVEA PT+ + VVS+ L+ IF RFG+P+ + SD G F ++
Subjt: MDFMGPFPSSFGYLYILLAVDYVSKWVEAIPTRTNDSFVVSRFLVSNIFSRFGIPREIISDQGTHFCNR
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