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Pay0017466 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017466
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:14727885..14730586
RNA-Seq ExpressionPay0017466
SyntenyPay0017466
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043551.1 uncharacterized protein E6C27_scaffold335G00530 [Cucumis melo var. makuwa]1.7e-3752.17Show/hide
Query:  DPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQ
        +P  +EK L LV K   VIGC K RKVKL TFLL G+ +DWW L  A    V+FV+W  F+R              KRRE L L Q D+TVA Y KKF +
Subjt:  DPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQ

Query:  LVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKE
        L +Y AITFI++EE KC  F++ LRT+ +A+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP +DR +EK  +KE
Subjt:  LVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKE

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]7.3e-10591.3Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        MPRR RERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPA+VEKWLRLVNKCFGVI CPKARKVKLATFLLEGNAKDW
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL
        WILF AKA           R KRRELLSLEQSDKTVAMYEKKFTQLVKY AITFILDEEGKCKRFKE LRTAT+AVVTSSASWSDFSKLVEATIHAEKCL
Subjt:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL

Query:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI
        AEGDEEKMLKEEKSSPRMDRAKEKGGSKE+
Subjt:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]4.1e-10891.74Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        +PRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL
        WILFAAK GEVDFVSWE F           + DKTVAMYEKKFTQLVKY AITFILDEEGKCKRFKEDLRTAT+AVVTSSASWSDFSKLVEATIHAEKCL
Subjt:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL

Query:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI
        AEGDEEKMLKEEKSSPRMDRAKEKGGSKE+
Subjt:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI

TYK04211.1 uncharacterized protein E5676_scaffold24967G00130 [Cucumis melo var. makuwa]9.4e-3648.19Show/hide
Query:  SIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLS
        +I+RLKALG  ++EGI +PADV++WL L+  CF VI C + +KVKLATFLL+  AKDWW    A+ G   +V WE+FR+              KR++ +S
Subjt:  SIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLS

Query:  LEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATI
        L Q D TV  YEK FT+L KY  + F++DE  KCK+F E LR   +A +T+S +WSDFSKLV+  +
Subjt:  LEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATI

TYK16014.1 uncharacterized protein E5676_scaffold3068G00100 [Cucumis melo var. makuwa]1.1e-3658.9Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        MP+RG  RG GQ SEAA+ VNVQAR+ERK+ LFAK NLE QFSI+RLK LGA T+E  A+  DVEK+       FGVIGC + RKVKLATF LEGN KD 
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQLVKY
        WIL+  K   VDFV+WE FRR              KRR+ LSL Q +K V+ YEKKFT+L KY
Subjt:  WILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQLVKY

TrEMBL top hitse value%identityAlignment
A0A5A7TPS8 Retrotrans_gag domain-containing protein8.3e-3852.17Show/hide
Query:  DPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQ
        +P  +EK L LV K   VIGC K RKVKL TFLL G+ +DWW L  A    V+FV+W  F+R              KRRE L L Q D+TVA Y KKF +
Subjt:  DPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQ

Query:  LVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKE
        L +Y AITFI++EE KC  F++ LRT+ +A+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP +DR +EK  +KE
Subjt:  LVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKE

A0A5A7UMQ3 Uncharacterized protein3.5e-10591.3Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        MPRR RERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPA+VEKWLRLVNKCFGVI CPKARKVKLATFLLEGNAKDW
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL
        WILF AKA           R KRRELLSLEQSDKTVAMYEKKFTQLVKY AITFILDEEGKCKRFKE LRTAT+AVVTSSASWSDFSKLVEATIHAEKCL
Subjt:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL

Query:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI
        AEGDEEKMLKEEKSSPRMDRAKEKGGSKE+
Subjt:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI

A0A5D3BN18 Uncharacterized protein2.0e-10891.74Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        +PRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL
        WILFAAK GEVDFVSWE F           + DKTVAMYEKKFTQLVKY AITFILDEEGKCKRFKEDLRTAT+AVVTSSASWSDFSKLVEATIHAEKCL
Subjt:  WILFAAKAGEVDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCL

Query:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI
        AEGDEEKMLKEEKSSPRMDRAKEKGGSKE+
Subjt:  AEGDEEKMLKEEKSSPRMDRAKEKGGSKEI

A0A5D3BWX9 Retrotrans_gag domain-containing protein4.6e-3648.19Show/hide
Query:  SIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLS
        +I+RLKALG  ++EGI +PADV++WL L+  CF VI C + +KVKLATFLL+  AKDWW    A+ G   +V WE+FR+              KR++ +S
Subjt:  SIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGEVDFVSWEDFRR--------------KRRELLS

Query:  LEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATI
        L Q D TV  YEK FT+L KY  + F++DE  KCK+F E LR   +A +T+S +WSDFSKLV+  +
Subjt:  LEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATI

A0A5D3CYI7 Retrotrans_gag domain-containing protein5.4e-3758.9Show/hide
Query:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW
        MP+RG  RG GQ SEAA+ VNVQAR+ERK+ LFAK NLE QFSI+RLK LGA T+E  A+  DVEK+       FGVIGC + RKVKLATF LEGN KD 
Subjt:  MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDW

Query:  WILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQLVKY
        WIL+  K   VDFV+WE FRR              KRR+ LSL Q +K V+ YEKKFT+L KY
Subjt:  WILFAAKAGEVDFVSWEDFRR--------------KRRELLSLEQSDKTVAMYEKKFTQLVKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGAAGAGGAAGAGAAAGAGGTAGAGGACAAGCTTCGGAAGCAGCAAAGTTGGTTAATGTGCAAGCAAGGAGAGAAAGAAAGAAGCTACTATTTGCTAAAACGAA
CTTAGAAGGACAATTTAGCATAGAAAGACTAAAGGCGCTAGGTGCCACGACTTATGAAGGAATTGCGGATCCAGCCGACGTGGAGAAGTGGTTACGTTTAGTAAACAAGT
GCTTTGGAGTAATAGGTTGTCCTAAAGCGAGGAAAGTCAAGTTGGCTACATTCTTGTTGGAAGGAAACGCCAAGGACTGGTGGATCTTATTTGCGGCAAAAGCAGGGGAA
GTAGATTTTGTTTCATGGGAAGATTTTCGAAGGAAAAGAAGGGAACTTCTGAGTTTGGAACAAAGCGATAAGACTGTTGCAATGTATGAGAAAAAGTTCACCCAACTGGT
AAAGTATGGCGCGATAACCTTTATATTGGATGAAGAAGGTAAGTGTAAGCGTTTTAAAGAAGACCTAAGGACAGCAACCCAAGCCGTAGTGACGTCGAGTGCTAGTTGGT
CAGACTTTTCAAAGTTAGTTGAGGCAACCATACATGCTGAAAAATGTTTGGCTGAGGGAGATGAAGAGAAAATGTTGAAGGAAGAGAAGTCGAGTCCACGAATGGACAGA
GCAAAGGAGAAAGGAGGTAGCAAAGAAATCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGAAGAGGAAGAGAAAGAGGTAGAGGACAAGCTTCGGAAGCAGCAAAGTTGGTTAATGTGCAAGCAAGGAGAGAAAGAAAGAAGCTACTATTTGCTAAAACGAA
CTTAGAAGGACAATTTAGCATAGAAAGACTAAAGGCGCTAGGTGCCACGACTTATGAAGGAATTGCGGATCCAGCCGACGTGGAGAAGTGGTTACGTTTAGTAAACAAGT
GCTTTGGAGTAATAGGTTGTCCTAAAGCGAGGAAAGTCAAGTTGGCTACATTCTTGTTGGAAGGAAACGCCAAGGACTGGTGGATCTTATTTGCGGCAAAAGCAGGGGAA
GTAGATTTTGTTTCATGGGAAGATTTTCGAAGGAAAAGAAGGGAACTTCTGAGTTTGGAACAAAGCGATAAGACTGTTGCAATGTATGAGAAAAAGTTCACCCAACTGGT
AAAGTATGGCGCGATAACCTTTATATTGGATGAAGAAGGTAAGTGTAAGCGTTTTAAAGAAGACCTAAGGACAGCAACCCAAGCCGTAGTGACGTCGAGTGCTAGTTGGT
CAGACTTTTCAAAGTTAGTTGAGGCAACCATACATGCTGAAAAATGTTTGGCTGAGGGAGATGAAGAGAAAATGTTGAAGGAAGAGAAGTCGAGTCCACGAATGGACAGA
GCAAAGGAGAAAGGAGGTAGCAAAGAAATCTCATGA
Protein sequenceShow/hide protein sequence
MPRRGRERGRGQASEAAKLVNVQARRERKKLLFAKTNLEGQFSIERLKALGATTYEGIADPADVEKWLRLVNKCFGVIGCPKARKVKLATFLLEGNAKDWWILFAAKAGE
VDFVSWEDFRRKRRELLSLEQSDKTVAMYEKKFTQLVKYGAITFILDEEGKCKRFKEDLRTATQAVVTSSASWSDFSKLVEATIHAEKCLAEGDEEKMLKEEKSSPRMDR
AKEKGGSKEIS