; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017516 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017516
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description30S ribosomal protein S17, chloroplastic
Genome locationchr01:34880954..34883376
RNA-Seq ExpressionPay0017516
SyntenyPay0017516
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000266 - Ribosomal protein S17/S11
IPR012340 - Nucleic acid-binding, OB-fold
IPR019979 - Ribosomal protein S17, conserved site
IPR019984 - 30S ribosomal protein S17


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059310.1 30S ribosomal protein S17 [Cucumis melo var. makuwa]3.4e-8099.39Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

XP_004141765.1 30S ribosomal protein S17, chloroplastic [Cucumis sativus]4.3e-7593.9Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPP+QSLKKLSISSSFLHGSTPLSFLSK SSS SP  SQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQF+VGDFVELEKCRPISKMKTFLAIPVPAR SKKKA EGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

XP_008462167.1 PREDICTED: 30S ribosomal protein S17, chloroplastic [Cucumis melo]1.3e-7998.78Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSK SSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

XP_023548191.1 30S ribosomal protein S17, chloroplastic-like [Cucurbita pepo subsp. pepo]2.0e-6486.42Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TL+ SS LQIPPLQ LK LS+S+SFLHGS PLSFLSK   SPS  ASQTPNFLPSI+AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        YQAHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GELGIPLESQQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

XP_038898716.1 30S ribosomal protein S17, chloroplastic [Benincasa hispida]5.1e-6889.02Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPPLQ LKKLSIS+SFLHGS+PL F SK    PSP A QTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVP R+SKKKAAE G+ GELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

TrEMBL top hitse value%identityAlignment
A0A0A0K952 Uncharacterized protein2.1e-7593.9Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPP+QSLKKLSISSSFLHGSTPLSFLSK SSS SP  SQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQF+VGDFVELEKCRPISKMKTFLAIPVPAR SKKKA EGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

A0A1S3CGC8 30S ribosomal protein S17, chloroplastic6.2e-8098.78Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSK SSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

A0A5A7UW29 30S ribosomal protein S17, chloroplastic1.6e-8099.39Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI

A0A6J1GQP3 30S ribosomal protein S17, chloroplastic-like4.1e-6385.62Show/hide
Query:  TTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
        + L+ SS LQIPPLQ LK LSIS+SFLHGS PLSFLSK   SPS  ASQTPNFLPSI+AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
Subjt:  TTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ

Query:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        AHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GELGIPLESQ++
Subjt:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

A0A6J1JVM9 30S ribosomal protein S17, chloroplastic-like4.8e-6486.42Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TL+ SS LQIPPLQ LK LS+S+SFLHGS PLSFLSK   SPS  ASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        YQAHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GEL IPLESQQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

SwissProt top hitse value%identityAlignment
P16180 30S ribosomal protein S17, chloroplastic4.1e-4468.06Show/hide
Query:  SLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE
        SL+ L +SS F HGSTPLS LSK +S P+    + P  +P IRAM+++QGRVVCAT+DKTVAVEVVRLAPHPKYKRR+R+KKKYQAHDPDNQFKVGD V 
Subjt:  SLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE

Query:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ
        LEK RPISK K+F+A+PV AR ++K  AE G    LG+PLESQQ
Subjt:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ

P17092 30S ribosomal protein S17, chloroplastic (Fragment)2.6e-3560.94Show/hide
Query:  LSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIP
        L+  S   SSP           P+I+AM++++G+VVCA+ +KTVAVEV RLAPHPKY++RIR+KKKYQAHDP+N FKVGD V+L K RPISK KTFLA+P
Subjt:  LSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIP

Query:  VPARTSKKKAAEGGEGGELGIPLESQQE
         P+R SKK     G  GELGIPL+SQQE
Subjt:  VPARTSKKKAAEGGEGGELGIPLESQQE

P82137 30S ribosomal protein S17, chloroplastic5.7e-3860.49Show/hide
Query:  SSSLLQIPPLQSLKKLSISSSFLHGSTP----LSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
        S SLL+ PPL S    S  + FLHG+T     L   S  S S SP +S T    P I+AMRS+QG+V+CATNDKTV VEVVRLAPHPKYKRR+R KKKYQ
Subjt:  SSSLLQIPPLQSLKKLSISSSFLHGSTP----LSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ

Query:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAE--GGEGGELGIPLESQQE
        AHDPDNQFKVGD+V+L+KCRPISK KTFLA+    R S     +       ELGIPLESQ E
Subjt:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAE--GGEGGELGIPLESQQE

Q9TJN6 30S ribosomal protein S17, chloroplastic1.4e-2854.93Show/hide
Query:  LSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKC
        L +SS F+  S P          P PL+S        I A R L GRVV    DKTV VEVVRLAPHPKYKRR RIKKKYQAHDPDNQFKVGD VEL+  
Subjt:  LSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKC

Query:  RPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ
        RPISK K FLAIP+P R +++K+       +L  PL+S  +Q
Subjt:  RPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQ

Q9ZST1 30S ribosomal protein S17, chloroplastic1.2e-2754.96Show/hide
Query:  STPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL
        S+P+       S  SP A         I+A + L GRVV    DKTV VEVVRLAPHPKYKRR RIKKKYQAHDPDNQFKVGD VEL + RPISK K FL
Subjt:  STPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL

Query:  AIPVPARTSKKKAAEGGEGGELGIPLESQQE
        A+P+P R +++K+       +L  PL+SQ +
Subjt:  AIPVPARTSKKKAAEGGEGGELGIPLESQQE

Arabidopsis top hitse value%identityAlignment
AT1G79850.1 ribosomal protein S172.9e-4568.06Show/hide
Query:  SLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE
        SL+ L +SS F HGSTPLS LSK +S P+    + P  +P IRAM+++QGRVVCAT+DKTVAVEVVRLAPHPKYKRR+R+KKKYQAHDPDNQFKVGD V 
Subjt:  SLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE

Query:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ
        LEK RPISK K+F+A+PV AR ++K  AE G    LG+PLESQQ
Subjt:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAACTCTAACTTCCTCATCCCTTCTTCAAATTCCTCCATTACAAAGCTTGAAGAAGCTCTCAATTTCTTCCTCTTTCCTCCATGGCTCAACTCCTCTCTCATT
CCTCTCTAAGGCCTCTTCATCACCGTCGCCATTGGCCTCCCAAACCCCCAATTTCCTTCCCTCCATTAGGGCCATGAGGTCCCTGCAAGGCCGCGTGGTTTGTGCCACCA
ACGACAAAACCGTCGCCGTTGAGGTAGTCCGATTAGCGCCTCATCCGAAATATAAGCGTCGGATTAGAATCAAGAAGAAGTACCAGGCGCATGATCCGGATAACCAGTTC
AAGGTTGGAGATTTTGTGGAGCTTGAAAAATGCCGTCCGATTAGTAAGATGAAGACGTTCCTGGCTATTCCGGTTCCAGCGAGGACTTCGAAGAAGAAAGCGGCGGAAGG
CGGTGAGGGAGGAGAGCTTGGAATTCCATTGGAGTCTCAGCAAGAACAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAACTCTAACTTCCTCATCCCTTCTTCAAATTCCTCCATTACAAAGCTTGAAGAAGCTCTCAATTTCTTCCTCTTTCCTCCATGGCTCAACTCCTCTCTCATT
CCTCTCTAAGGCCTCTTCATCACCGTCGCCATTGGCCTCCCAAACCCCCAATTTCCTTCCCTCCATTAGGGCCATGAGGTCCCTGCAAGGCCGCGTGGTTTGTGCCACCA
ACGACAAAACCGTCGCCGTTGAGGTAGTCCGATTAGCGCCTCATCCGAAATATAAGCGTCGGATTAGAATCAAGAAGAAGTACCAGGCGCATGATCCGGATAACCAGTTC
AAGGTTGGAGATTTTGTGGAGCTTGAAAAATGCCGTCCGATTAGTAAGATGAAGACGTTCCTGGCTATTCCGGTTCCAGCGAGGACTTCGAAGAAGAAAGCGGCGGAAGG
CGGTGAGGGAGGAGAGCTTGGAATTCCATTGGAGTCTCAGCAAGAACAGATTTAG
Protein sequenceShow/hide protein sequence
MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKASSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQF
KVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQI