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Pay0017538 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017538
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionclassical arabinogalactan protein 26
Genome locationchr01:31159751..31160841
RNA-Seq ExpressionPay0017538
SyntenyPay0017538
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4576.98Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNSGGWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
XP_008451434.1 PREDICTED: classical arabinogalactan protein 26 [Cucumis melo]2.0e-6599.27Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNS GWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
XP_011659314.1 classical arabinogalactan protein 26 [Cucumis sativus]1.1e-5285.4Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTAS FPF+FASYPN FPTH   + SSISAAPEFSP+PAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        SP+ S+PFS AAALNSGGWCCSVF+AL T L AEL R
Subjt:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]8.6e-4576.26Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNSGGWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]2.3e-4576.98Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS FPF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        PL P+ S+PFSA A LNSGGWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
TrEMBL top hitse value%identityAlignment
A0A0A0K510 Uncharacterized protein5.4e-5385.4Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTAS FPF+FASYPN FPTH   + SSISAAPEFSP+PAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        SP+ S+PFS AAALNSGGWCCSVF+AL T L AEL R
Subjt:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
A0A1S3BRG9 classical arabinogalactan protein 269.5e-6699.27Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNS GWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
A0A5A7UQZ3 Classical arabinogalactan protein 269.5e-6699.27Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNS GWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
A0A6J1GPB2 classical arabinogalactan protein 264.2e-4576.26Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNSGGWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
A0A6J1JX46 classical arabinogalactan protein 263.5e-4475.54Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS F F+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD  PAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNSGGWC S+++AL  A+  E+ R
Subjt:  PLSPTWSMPFSAAAALNSGGWCCSVFLALMTALAAELHR
SwissProt top hitse value%identityAlignment
Q94F57 Classical arabinogalactan protein 264.8e-0644.44Show/hide
Query:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSGGWCCSVF
        S+ISAAP F P          PA S D SPLFPTPG + + PS      +PTIPSS SPPNPD   V P P + +SP  S +P S++  L S      + 
Subjt:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSGGWCCSVF

Query:  LALMTALA
        + LM  LA
Subjt:  LALMTALA
Arabidopsis top hitse value%identityAlignment
AT2G47930.1 arabinogalactan protein 263.4e-0744.44Show/hide
Query:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSGGWCCSVF
        S+ISAAP F P          PA S D SPLFPTPG + + PS      +PTIPSS SPPNPD   V P P + +SP  S +P S++  L S      + 
Subjt:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSGGWCCSVF

Query:  LALMTALA
        + LM  LA
Subjt:  LALMTALA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCTTTTTCCCTTTCGCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCGGTACCT
CATGACTTCTTCCATCTCCGCCGCCCCCGAATTTTCCCCGGCACCGGCGCCGTCGTCAGACATTTCTCCACTCTTTCCCACTCCCGGCGACGCTACCCTTCCGCCCTCCT
CCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCTGATTTTATGGACGTTGCGCCGGCGCCGGAGATGCCTCTTTCGCCGACTTGGTCCATGCCATTCTCTGCC
GCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTTTTTCTAGCTCTTATGACGGCTCTCGCTGCAGAGCTCCACCGGTGA
mRNA sequenceShow/hide mRNA sequence
GTGGTATTTGCATAGAACACAACACATAAAACACCAAATGCAAAAAGTTAAAACAATAGAATATTTTTTAAAAAAAAAAAATAGGGAAAAAGAAAACCTTAAGAAAAACA
TTTCCATGTGATTGGGAATGGGGAAGAGAAGAAACCCAACACACACACACACACAATATCAAACCTTGTCTGTTAGCGTCACTTGCCAAGCTGTATTATCACATGACAGC
CCACTTATATTCTGCCACGTTTCATTCTCTTAGCTCTACACTCACAATCACACCCTCACCTTTAATAATCATAACCCCTTTTGGCCTTTGGGTTTTTCCTTCTCTTCCTT
CATCTTCTTTCTTCTTCCTCTCAATTTCTCTACTTTTTTAGAAATATAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCATTGAAAATGGCTTCCAT
TTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCTTTTTCCCTTTCGCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCGGTACCTCATGACTTCTT
CCATCTCCGCCGCCCCCGAATTTTCCCCGGCACCGGCGCCGTCGTCAGACATTTCTCCACTCTTTCCCACTCCCGGCGACGCTACCCTTCCGCCCTCCTCCTTGCCTACC
ATACCCTCCAGTCCCAGCCCTCCGAACCCTGATTTTATGGACGTTGCGCCGGCGCCGGAGATGCCTCTTTCGCCGACTTGGTCCATGCCATTCTCTGCCGCTGCTGCTCT
TAACTCCGGTGGGTGGTGTTGTTCGGTTTTTCTAGCTCTTATGACGGCTCTCGCTGCAGAGCTCCACCGGTGACGGGTGAGCCGCCGTTGCTCGGATTTTAGTGGACATT
GGAGTGTAGTTATGTTTTATTGATTTGAGTAATTCTCGTCTTTTACTTTTGTGTTTTCTTGTTACTATATATATATATACACATATTTATTTAATTTTTGGATTCGAGTC
TATTTTATTTTTTCAATTCCATTATTTGGGTGTTTCGGGGTAAAGAAAATTGAATTATTATTTGAATGTTGAATTAAAAATAAGGAAAAAAATTAATATGT
Protein sequenceShow/hide protein sequence
MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPLSPTWSMPFSA
AAALNSGGWCCSVFLALMTALAAELHR