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Pay0017552 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017552
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionglycine-rich RNA-binding protein GRP2A-like
Genome locationchr07:22216761..22219800
RNA-Seq ExpressionPay0017552
SyntenyPay0017552
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063029.1 hypothetical protein E6C27_scaffold468G001370 [Cucumis melo var. makuwa]1.7e-95100Show/hide
Query:  MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD
        MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD
Subjt:  MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD

Query:  TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
        TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
Subjt:  TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL

KAE8649249.1 hypothetical protein Csa_015081, partial [Cucumis sativus]7.3e-8388.83Show/hide
Query:  VVAAILCCFCMIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSR
        VVAAILCCFC+IG GY+KKDA+ LPTPSVSIGRSRPLQTYRD+EFGQGIRTYRQDSTPRSE+SI  DTRGSQR EQSIF DARGFQTSEQSIFPDTRSSR
Subjt:  VVAAILCCFCMIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSR

Query:  RNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
        RNE   ILPDTQ SRRSE+IDRQD TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDG YVDNC DGTDG GVYGGG GSNS GNGSQL
Subjt:  RNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL

KAG6600486.1 hypothetical protein SDJN03_05719, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1741.63Show/hide
Query:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPDT
        ILCC C+I  G K+KD+   PTPS SI   R      P Q+Y DVE GQGIR +RQD T RSEQS+  D  G+QR EQ  F    +R  Q+SE S+  D 
Subjt:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPDT

Query:  RSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYGG
        RS                                 KDGGMAI AGAGAA+A AA  LGLSS            Y G   +  GY D+CG+G    G  GG
Subjt:  RSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYGG

Query:  GGGSNSCGN
        G     CG+
Subjt:  GGGSNSCGN

XP_022942031.1 glycine-rich RNA-binding protein GRP2A-like [Cucurbita moschata]1.6e-1641.9Show/hide
Query:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR-------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPD
        ILCC C+I  G K+KD+   PTPS SI   R       P Q+Y DVE GQGIR YRQD T RSEQS+  D  G+QR EQ  F    +R  Q+SE S+  D
Subjt:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR-------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPD

Query:  TRSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYG
         RS                                 KDGGMAI AGAGAA+A AA  LGLSS            Y G      GY D+CG+G    G  G
Subjt:  TRSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYG

Query:  GGGGSNSCGN
        GG     CG+
Subjt:  GGGGSNSCGN

XP_023543717.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]3.8e-1541.26Show/hide
Query:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPDT
        ILCC C+I G  +K      PTPS SI   R      P Q+Y DVE GQGIR YRQD T RSEQS+  D  G+QR E+  F    +R  Q+SE S+  D 
Subjt:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPDT

Query:  RSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS-----YQGGED---IDGGYVDNCGDGTDGSGVYGGGGGS
                                      ++S  KDGGMAILAGAGAA+A AA  +GLSS     Y G  D    DG   D  GD        GG GG 
Subjt:  RSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS-----YQGGED---IDGGYVDNCGDGTDGSGVYGGGGGS

Query:  NSCGNG
          CG G
Subjt:  NSCGNG

TrEMBL top hitse value%identityAlignment
A0A0A0L0B2 Uncharacterized protein3.5e-8388.83Show/hide
Query:  VVAAILCCFCMIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSR
        VVAAILCCFC+IG GY+KKDA+ LPTPSVSIGRSRPLQTYRD+EFGQGIRTYRQDSTPRSE+SI  DTRGSQR EQSIF DARGFQTSEQSIFPDTRSSR
Subjt:  VVAAILCCFCMIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSR

Query:  RNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
        RNE   ILPDTQ SRRSE+IDRQD TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDG YVDNC DGTDG GVYGGG GSNS GNGSQL
Subjt:  RNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL

A0A5A7VBP6 Uncharacterized protein8.1e-96100Show/hide
Query:  MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD
        MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD
Subjt:  MIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSIFPDTRSSRRNEHLRILPD

Query:  TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
        TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL
Subjt:  TQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL

A0A6J1CLX2 ctenidin-3-like3.3e-0446.08Show/hide
Query:  RRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDG--TDG---SGVYGGGGGSNSCGNG
        R+  H+  +   QG+R +     +   R S IKDGGMAILAGAG AIATAA + GLSS    E  +G Y D+CGDG  +DG    G  G G G   CG+G
Subjt:  RRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDG--TDG---SGVYGGGGGSNSCGNG

Query:  SQ
         +
Subjt:  SQ

A0A6J1FMR9 glycine-rich RNA-binding protein GRP2A-like7.5e-1741.9Show/hide
Query:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR-------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPD
        ILCC C+I  G K+KD+   PTPS SI   R       P Q+Y DVE GQGIR YRQD T RSEQS+  D  G+QR EQ  F    +R  Q+SE S+  D
Subjt:  ILCCFCMIGGGYKKKDAHGLPTPSVSIGRSR-------PLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIF--PDARGFQTSEQSIFPD

Query:  TRSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYG
         RS                                 KDGGMAI AGAGAA+A AA  LGLSS            Y G      GY D+CG+G    G  G
Subjt:  TRSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDGGYVDNCGDGTDGSGVYG

Query:  GGGGSNSCGN
        GG     CG+
Subjt:  GGGGSNSCGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTATATAAAACTAGCATTGAATCCATTGGGAAGGTTCTTGTGGTGGGTTGTTGCTGCGATTTTATGTTGCTTTTGTATGATTGGAGGTGGTTACAAAAAGAA
AGATGCACATGGATTGCCTACTCCAAGTGTAAGTATTGGACGTTCAAGGCCATTGCAAACGTACCGGGATGTTGAATTTGGACAAGGTATTCGAACTTATAGACAAGACT
CGACTCCAAGAAGCGAACAAAGCATTTTTCCTGACACACGAGGTTCTCAAAGAGATGAACAAAGCATTTTTCCTGACGCACGAGGTTTTCAAACAAGTGAACAAAGCATT
TTCCCTGACACACGAAGTTCTCGAAGAAATGAACATCTTCGTATTCTACCGGACACACAAGGTTCTCGAAGAAGTGAACGAATCGACCGACAAGATAATACTCGAGAGAG
CAGAATCAAGGACGGTGGGATGGCCATCTTGGCTGGAGCAGGCGCTGCTATAGCTACTGCAGCTACTGTTCTTGGTTTAAGTAGTTATCAAGGAGGAGAAGATATTGATG
GTGGCTATGTCGATAATTGTGGCGATGGTACCGATGGCAGTGGCGTCTATGGTGGTGGTGGCGGCAGCAACAGCTGTGGCAATGGCTCTCAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTATATAAAACTAGCATTGAATCCATTGGGAAGGTTCTTGTGGTGGGTTGTTGCTGCGATTTTATGTTGCTTTTGTATGATTGGAGGTGGTTACAAAAAGAA
AGATGCACATGGATTGCCTACTCCAAGTGTAAGTATTGGACGTTCAAGGCCATTGCAAACGTACCGGGATGTTGAATTTGGACAAGGTATTCGAACTTATAGACAAGACT
CGACTCCAAGAAGCGAACAAAGCATTTTTCCTGACACACGAGGTTCTCAAAGAGATGAACAAAGCATTTTTCCTGACGCACGAGGTTTTCAAACAAGTGAACAAAGCATT
TTCCCTGACACACGAAGTTCTCGAAGAAATGAACATCTTCGTATTCTACCGGACACACAAGGTTCTCGAAGAAGTGAACGAATCGACCGACAAGATAATACTCGAGAGAG
CAGAATCAAGGACGGTGGGATGGCCATCTTGGCTGGAGCAGGCGCTGCTATAGCTACTGCAGCTACTGTTCTTGGTTTAAGTAGTTATCAAGGAGGAGAAGATATTGATG
GTGGCTATGTCGATAATTGTGGCGATGGTACCGATGGCAGTGGCGTCTATGGTGGTGGTGGCGGCAGCAACAGCTGTGGCAATGGCTCTCAACTTTGA
Protein sequenceShow/hide protein sequence
MANYIKLALNPLGRFLWWVVAAILCCFCMIGGGYKKKDAHGLPTPSVSIGRSRPLQTYRDVEFGQGIRTYRQDSTPRSEQSIFPDTRGSQRDEQSIFPDARGFQTSEQSI
FPDTRSSRRNEHLRILPDTQGSRRSERIDRQDNTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGGYVDNCGDGTDGSGVYGGGGGSNSCGNGSQL