; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017626 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017626
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPseudoU_synth_2 domain-containing protein
Genome locationchr03:24965666..24969431
RNA-Seq ExpressionPay0017626
SyntenyPay0017626
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8651920.1 hypothetical protein MANES_06G035900v8 [Manihot esculenta]7.6e-0436.9Show/hide
Query:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
        KGN+ VHNS+DALA  ALSYDY++GPKL  R+    +    +  T  ++GL      +W  S  +  +    ++ D +  MY+R
Subjt:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
KAG8651924.1 hypothetical protein MANES_06G035900v8 [Manihot esculenta]7.6e-0436.9Show/hide
Query:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
        KGN+ VHNS+DALA  ALSYDY++GPKL  R+    +    +  T  ++GL      +W  S  +  +    ++ D +  MY+R
Subjt:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
XP_011649894.1 RNA pseudouridine synthase 3, mitochondrial [Cucumis sativus]6.8e-0534.75Show/hide
Query:  VQVECPQLGGLDEKGNLKSMR---------------------------------------------------------------------KGNVLVHNSI
        VQVECPQLGGLDEKGNLK MR                                                                     KG + VHNS+
Subjt:  VQVECPQLGGLDEKGNLKSMR---------------------------------------------------------------------KGNVLVHNSI

Query:  DALATVALSYDYNDGPKL
        DALA  ALSYDY+DGPKL
Subjt:  DALATVALSYDYNDGPKL
XP_021616253.1 RNA pseudouridine synthase 3, mitochondrial-like [Manihot esculenta]7.6e-0436.9Show/hide
Query:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
        KGN+ VHNS+DALA  ALSYDY++GPKL  R+    +    +  T  ++GL      +W  S  +  +    ++ D +  MY+R
Subjt:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
TrEMBL top hitse value%identityAlignment
A0A0A0LQ04 PseudoU_synth_2 domain-containing protein3.3e-0534.75Show/hide
Query:  VQVECPQLGGLDEKGNLKSMR---------------------------------------------------------------------KGNVLVHNSI
        VQVECPQLGGLDEKGNLK MR                                                                     KG + VHNS+
Subjt:  VQVECPQLGGLDEKGNLKSMR---------------------------------------------------------------------KGNVLVHNSI

Query:  DALATVALSYDYNDGPKL
        DALA  ALSYDY+DGPKL
Subjt:  DALATVALSYDYNDGPKL
A0A2C9VMN6 PseudoU_synth_2 domain-containing protein3.7e-0436.9Show/hide
Query:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
        KGN+ VHNS+DALA  ALSYDY++GPKL  R+    +    +  T  ++GL      +W  S  +  +    ++ D +  MY+R
Subjt:  KGNVLVHNSIDALATVALSYDYNDGPKL-SRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGGRTSYKDQKSLMYRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78910.1 Pseudouridine synthase family protein8.1e-0460.71Show/hide
Query:  KGNVLVHNSIDALATVALSYDYNDGPKL
        KGNV +HNS+DALA  ALS+  ++GP+L
Subjt:  KGNVLVHNSIDALATVALSYDYNDGPKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATGGAGAGGAGTGGGGAGGTGGAACCGTGGACTGGATGTGAGCTAAAACCGAATGTCCAGGTTGAATGCCCACAATTGGGTGGCTTGGATGAAAAAGGAAATTT
GAAATCTATGAGAAAGGGGAATGTTCTAGTTCACAATAGTATAGATGCATTGGCGACTGTAGCATTATCTTATGATTACAATGATGGACCCAAGTTGTCACGGATCCATT
GTGCTGGAGCTCTGTGCACACCAATTGTTATGACTACAAATACAGTTGGTTTGTTCATCGGACATGGAAACAAATGGCCCAAGTCAACATTGAGCCGATCGGTGGGAGGT
CGTACAAGTTACAAAGACCAGAAGAGTTTGATGTATAGAAGGGGAGTGTTTTACAAGGTGCCCTTGTCACAACTTCGTTGTAGAGATCTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCATGGAGAGGAGTGGGGAGGTGGAACCGTGGACTGGATGTGAGCTAAAACCGAATGTCCAGGTTGAATGCCCACAATTGGGTGGCTTGGATGAAAAAGGAAATTT
GAAATCTATGAGAAAGGGGAATGTTCTAGTTCACAATAGTATAGATGCATTGGCGACTGTAGCATTATCTTATGATTACAATGATGGACCCAAGTTGTCACGGATCCATT
GTGCTGGAGCTCTGTGCACACCAATTGTTATGACTACAAATACAGTTGGTTTGTTCATCGGACATGGAAACAAATGGCCCAAGTCAACATTGAGCCGATCGGTGGGAGGT
CGTACAAGTTACAAAGACCAGAAGAGTTTGATGTATAGAAGGGGAGTGTTTTACAAGGTGCCCTTGTCACAACTTCGTTGTAGAGATCTAGCTTAG
Protein sequenceShow/hide protein sequence
MGMERSGEVEPWTGCELKPNVQVECPQLGGLDEKGNLKSMRKGNVLVHNSIDALATVALSYDYNDGPKLSRIHCAGALCTPIVMTTNTVGLFIGHGNKWPKSTLSRSVGG
RTSYKDQKSLMYRRGVFYKVPLSQLRCRDLA