CuGenDBv2

Gene ID	Pay0017648
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	chr12:4271859..4274371
RNA-Seq Expression	Pay0017648
Synteny	Pay0017648
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0051103 - DNA ligation involved in DNA repair (biological process) GO:0003677 - DNA binding (molecular function) GO:0003910 - DNA ligase (ATP) activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR005162 - Retrotransposon gag domain IPR021109 - Aspartic peptidase domain superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ97017.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

83.44

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSA EGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDH+IQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

TYK23724.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

83.44

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLY RFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

TYK26407.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BD16 Ty3/gypsy retrotransposon protein

0.0e+00

83.44

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSA EGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDH+IQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

A0A5D3CEX8 Ty3/gypsy retrotransposon protein

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

A0A5D3DD68 Ty3/gypsy retrotransposon protein

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

A0A5D3DJA9 Ty3/gypsy retrotransposon protein

0.0e+00

83.44

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLY RFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

A0A5D3DRT3 Ty3/gypsy retrotransposon protein

0.0e+00

83.58

Show/hide

Query:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
        MTQKLIEERLDA EKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSS+LTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE
Subjt:  MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLE

Query:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
        MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL
Subjt:  MPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEEL

Query:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------
        SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL EEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAE             
Subjt:  SAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEE------------

Query:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
                      R WTDSELQARRDKGLCYRCEEPFSKGHRCKN+ELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT
Subjt:  ------------SLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVVADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGT

Query:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------
        VENQEIVIMVDCGATHNFISLKLVENLKLP AETTNYGVIMGSGKA                                                      
Subjt:  VENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKA------------------------------------------------------

Query:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
                                             GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG
Subjt:  -------------------------------------GFLVNFRAMGIPKADRELVVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEG

Query:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
        TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ
Subjt:  TDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQ

Query:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
        IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF
Subjt:  IRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVF

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

7.0e-39

Show/hide

Query:  EEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGG-----WRFC
        EE Q   A LQ+     +   D L    +  H I  K    P+  + Y YP A + E+E  + DML  GIIR S SP++SP+ +V KK        +R  
Subjt:  EEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGG-----WRFC

Query:  VDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVFL
        +DYR LN  TV D+ PIP +DE+L +L   + F+ IDL  G+HQI +  E +SKTAF T  GHYE+L MPFGL NAPATFQ  MN + RP L K  LV+L
Subjt:  VDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVFL

P20825 Retrovirus-related Pol polyprotein from transposon 297

3.0e-37

48.43

Show/hide

Query:  PINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGG-----WRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSG
        PI  + Y      + E+E  V +ML  G+IR S SP++SP  +V KK        +R  +DYR LN  T+PD++PIP +DE+L +L     F+ IDL  G
Subjt:  PINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGG-----WRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSG

Query:  YHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVFL
        +HQI + +E ISKTAF T  GHYE+L MPFGL NAPATFQ  MN + RP L K  LV+L
Subjt:  YHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVFL

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

1.9e-39

42.51

Show/hide

Query:  LQQEFGDVFEMPDGLPPMRR------IDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNR
        LQQ++ ++    + LPP         + H I++K G     ++PY      + EI ++V  +L +  I PS SP SSPV+LV KKDG +R CVDYR LN+
Subjt:  LQQEFGDVFEMPDGLPPMRR------IDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNR

Query:  ATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRP--YLRKFLLVFLTIFWCT
        AT+ D FP+P ID LL  +  A IF+ +DL SGYHQI +  +D  KTAF T  G YE+ VMPFGL NAP+TF   M   FR   ++  +L   L      
Subjt:  ATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRP--YLRKFLLVFLTIFWCT

Query:  AGTWKHI
           WKH+
Subjt:  AGTWKHI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

2.5e-36

38.94

Show/hide

Query:  LVVTDAVEEYQSEFAQLQQEFGDVFEMP-DGLPPMRRIDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKK----
        L+  +  +  Q     L  EF  +FE P  G+     +   I+     DPI  + Y YP   + E+ER ++++L  GIIRPS SP++SP+ +V KK    
Subjt:  LVVTDAVEEYQSEFAQLQQEFGDVFEMP-DGLPPMRRIDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKK----

Query:  -DGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYL
         +  +R  VD++ LN  T+PD +PIP I+  L  L  A  F+ +DL SG+HQI +++ DI KTAF T  G YEFL +PFGL NAPA FQ +++ + R ++
Subjt:  -DGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYL

Query:  RKFLLVFL
         K   V++
Subjt:  RKFLLVFL

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.9e-39

42.51

Show/hide

Query:  LQQEFGDVFEMPDGLPPMRR------IDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNR
        LQQ++ ++    + LPP         + H I++K G     ++PY      + EI ++V  +L +  I PS SP SSPV+LV KKDG +R CVDYR LN+
Subjt:  LQQEFGDVFEMPDGLPPMRR------IDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNR

Query:  ATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRP--YLRKFLLVFLTIFWCT
        AT+ D FP+P ID LL  +  A IF+ +DL SGYHQI +  +D  KTAF T  G YE+ VMPFGL NAP+TF   M   FR   ++  +L   L      
Subjt:  ATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRP--YLRKFLLVFLTIFWCT

Query:  AGTWKHI
           WKH+
Subjt:  AGTWKHI

Arabidopsis top hits

e value

%identity

Alignment

AT3G29750.1 Eukaryotic aspartyl protease family protein

2.6e-04

36.84

Show/hide

Query:  VVGLTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMG
        V+ LT     +  G + + ++V+ +D GAT NFI ++L  +LKLPT+ T    V++G
Subjt:  VVGLTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMG

AT3G30770.1 Eukaryotic aspartyl protease family protein

8.9e-05

30.67

Show/hide

Query:  YEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMG
        +EG + +   + ++   S    T     +  G +   ++V+++D GAT+NFIS +L   LKLPT+ T    V++G
Subjt:  YEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMG

ATMG00850.1 DNA/RNA polymerases superfamily protein

3.6e-06

51.28

Show/hide

Query:  QKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGW
        ++  ++  + +ML + II+PS SP+SSPV+LV+KKDGGW
Subjt:  QKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACGCAAAAATTAATCGAAGAACGATTGGATGCGTTGGAAAAGGAGATTGAAGCCATCAAAAAAGAGGTTCAACGCATACCTGTCCTAGAGAAGACGATGGAGAAAAT
GCACGCCATGTTAACCGAAATGTACGAGGATCGACAAAGACAACCTGGCAGTTCGAAACTGACCGGAGTGAGTACGGGTAAACGGAAAATGCGGACGGAAGATGTGGTCG
ACGGAGACGAGGAAGGAGAAACATCTCTGAGTTTAGAACCGGGGGCAGGGCAGGATCGCATAAAGTTTAAAAAACTGGAGATGCCAGTTTTTAATGGAGAAGACCCGGAT
GGTTGGATTTATAGGGCGGAGCACTATTTTCAGATGCATCTTCTGAATGAGCAGGAGAAGTTGAAGATAGCTATAGTCAGCATGGAAGGAAAAGGATTGTGCTGGTTCCG
TTGGGCGGAGAATAGGAAACGCTTTCGATCGTGGAAAGAGTTAAAAGAGAGATTGTACACCCGTTTTCGTAACAGAGAATATGGAACGGGTTGCGCGCGATTCTTGGCTA
TAAAACAGGAGGGATCGGTGGGAGAATACTTGCAGCGTTTTGAGGAGCTGTCGGCGCCGTTACCGGAGATGGCGGAGGACGTCTTGGTAGGGGCATTCACGAATGGGTTG
GACCCGGTTATTAGAACTGAAGTATTTGCAATGCGGGCCGTGGGCTTGGAGGACATGATGGATGCGGCCCGATTAGTTGAAGAGAAATTAGAGATAGCTAGGGCTTCGCA
CGGCCCATATGCTAAAGATTTTAAATCAGCCCAGAAACCCGCGCCAAAAAATGTTGAAACCCCTTCGACGAAAATCGTGACCTTGGCCGAGGAATCCCTGCGAGTGTGGA
CGGATTCTGAACTGCAAGCACGACGGGACAAAGGGCTGTGTTATCGATGCGAAGAACCATTTAGCAAAGGCCATCGCTGCAAAAACAGAGAACTTCGCCTCTGTGTGGTC
GCGGACGATCTAGAAGATGTTGAAATGGTGGATAGTGCGTACGAGGGAGAGATGGTGGAAGTTAGCCCGGTGGTAGAATTGTCCCTGAACTCCGTTGTGGGGTTGACAGC
ACCGGGTACGTTCAAGCTAAAAGGAACGGTGGAGAACCAAGAAATAGTGATCATGGTGGATTGTGGGGCGACCCATAATTTCATCTCCCTGAAGCTGGTCGAGAATCTAA
AATTACCTACGGCGGAAACAACGAATTACGGAGTTATTATGGGGTCCGGAAAGGCGGGGTTTCTAGTTAACTTCAGAGCCATGGGGATTCCCAAGGCAGACCGGGAATTA
GTAGTGACAGATGCTGTGGAGGAATATCAATCAGAATTTGCACAGCTACAGCAGGAATTTGGTGATGTATTTGAAATGCCCGACGGTCTGCCCCCGATGCGACGAATCGA
CCATAGGATCCAGTTGAAAGAAGGTACGGATCCGATTAACGTGAGACCATACCGCTACCCACATGCCCAGAAAAACGAGATTGAAAGATTGGTGAATGATATGCTGGCTT
CAGGAATCATACGACCGAGCACCAGCCCGTTTTCCAGCCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGTTTCTGCGTCGACTATCGCGCTTTAAACCGAGCA
ACGGTACCAGATAAGTTCCCTATACCCATGATCGATGAGCTGTTGGACGAGTTAAGTGGAGCGAGCATTTTCTCCAAAATAGACTTGAAATCCGGGTACCATCAAATCCG
GGTACGGGATGAAGATATAAGCAAGACAGCTTTCAGAACGCACGAGGGTCATTACGAGTTCTTAGTCATGCCCTTCGGACTCACCAATGCACCTGCAACATTCCAAGCAT
TGATGAATCAGGTTTTTCGGCCTTATTTACGCAAGTTTTTGCTGGTATTTTTGACGATATTCTGGTGTACAGCAGGGACGTGGAAACACATCTAG

mRNA sequence

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Protein sequence

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MTQKLIEERLDALEKEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDRQRQPGSSKLTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPD
GWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYGTGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGL
DPVIRTEVFAMRAVGLEDMMDAARLVEEKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAEESLRVWTDSELQARRDKGLCYRCEEPFSKGHRCKNRELRLCVV
ADDLEDVEMVDSAYEGEMVEVSPVVELSLNSVVGLTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPTAETTNYGVIMGSGKAGFLVNFRAMGIPKADREL
VVTDAVEEYQSEFAQLQQEFGDVFEMPDGLPPMRRIDHRIQLKEGTDPINVRPYRYPHAQKNEIERLVNDMLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRA
TVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFRPYLRKFLLVFLTIFWCTAGTWKHI

Pay0017648 (gene) of Melon (Payzawat) v1 genome