; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017670 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017670
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr05:22698807..22699799
RNA-Seq ExpressionPay0017670
SyntenyPay0017670
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-9765.76Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MY IERLKKLGATVFEGSTDP D E                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------
        L+LKQ SLSVA+YERKY ELSRYAEMIVASESDRC RFERGLRFEIRT VTAIAKW NFSQLVETALRV+QSIVEEK AMELSRGVSTT           
Subjt:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSSGSAYQRQS+R  SQ ANSVARSRTGQESVASESKRTPC                    CG+ GHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTATGKGTSGTR
         VRRDQGVESHTVEQ RISTA G+ TSG R
Subjt:  AVRRDQGVESHTVEQPRISTATGKGTSGTR

KAA0057197.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-10983.59Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE---------------------TFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASE
        MY IERLKKLGATVFEG TDP +TE                     TFRGIFEEKYYPTTY EAKRDEFL+LKQ SLSV EYERKY ELSRYAEMIVASE
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE---------------------TFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARS
        SDRCRRFERGLRFEIRT +TAIAKW NFSQLVETALRVEQSIVEEK  MELSRGVSTTSGCQDFK RSGGKPLRQMSSGSAYQRQSQR  SQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARS

Query:  RTGQESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
        RTGQESVASES+RTPCCGQ GHFKRDCPQLRVAVRRDQGVESHTVEQPRISTA G+GTSG R
Subjt:  RTGQESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-9765.76Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MY IERLKKLGATVFEGSTDP D E                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------
        L+LKQ SLSVA+YERKY ELSRYAEMIVASESDRC RFERGLRFEIRT VTAIAKW NFSQLVETALRV+QSIVEEK AMELSRGVSTT           
Subjt:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSSGSAYQRQS+R  SQ ANSVARSRTGQESVASESKRTPC                    CG+ GHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTATGKGTSGTR
         VRRDQGVESHTVEQ RISTA G+ TSG R
Subjt:  AVRRDQGVESHTVEQPRISTATGKGTSGTR

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.2e-9577.91Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA
        M  IERLKKLGATVFEGSTDP D E FRGIFEEKYYPTTYCEAKRDEFL+LKQ SL V EYE KY ELSRYAEMIVASESDRCRRFERGLRFE+RT VTA
Subjt:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQ
        IAKWTNFSQLVETALRVEQSIVEEK AMELSRGVSTT                 SGCQDFKRRSGGKPLRQMSSG+AYQRQSQR  SQSANSVARSRT  
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQ

Query:  ESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
                         HFKRDCPQLRVAVRRDQGVESHTVEQPRIS A G+GTSG R
Subjt:  ESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

XP_008464978.1 PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]5.8e-11390.87Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA
        MY IERLKKLGATVFEG TDP +TETFRGIFEEKYYPTTY EAKRDEFL+LKQ SLSV EYERKY ELSRYAEMIVASESDRCRRFERGLRFEIRT +TA
Subjt:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPCCGQIG
        IAKW NFSQLVETALRVEQSIVEEK  MELSRGVSTTSGCQDFK RSGGKPLRQMSSGSAYQRQSQR  SQSANSVARSRTGQESVASES+RTPCCGQ G
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPCCGQIG

Query:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
        HFKRDCPQLRVAVRRDQGVESHTVEQPRISTA G+GTSG R
Subjt:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

TrEMBL top hitse value%identityAlignment
A0A1S3CMU0 uncharacterized protein LOC1035027182.8e-11390.87Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA
        MY IERLKKLGATVFEG TDP +TETFRGIFEEKYYPTTY EAKRDEFL+LKQ SLSV EYERKY ELSRYAEMIVASESDRCRRFERGLRFEIRT +TA
Subjt:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPCCGQIG
        IAKW NFSQLVETALRVEQSIVEEK  MELSRGVSTTSGCQDFK RSGGKPLRQMSSGSAYQRQSQR  SQSANSVARSRTGQESVASES+RTPCCGQ G
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPCCGQIG

Query:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
        HFKRDCPQLRVAVRRDQGVESHTVEQPRISTA G+GTSG R
Subjt:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

A0A5A7T7M6 Reverse transcriptase7.5e-9865.76Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MY IERLKKLGATVFEGSTDP D E                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------
        L+LKQ SLSVA+YERKY ELSRYAEMIVASESDRC RFERGLRFEIRT VTAIAKW NFSQLVETALRV+QSIVEEK AMELSRGVSTT           
Subjt:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSSGSAYQRQS+R  SQ ANSVARSRTGQESVASESKRTPC                    CG+ GHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTATGKGTSGTR
         VRRDQGVESHTVEQ RISTA G+ TSG R
Subjt:  AVRRDQGVESHTVEQPRISTATGKGTSGTR

A0A5A7UJV1 DNA/RNA polymerases superfamily protein1.6e-9577.91Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA
        M  IERLKKLGATVFEGSTDP D E FRGIFEEKYYPTTYCEAKRDEFL+LKQ SL V EYE KY ELSRYAEMIVASESDRCRRFERGLRFE+RT VTA
Subjt:  MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQ
        IAKWTNFSQLVETALRVEQSIVEEK AMELSRGVSTT                 SGCQDFKRRSGGKPLRQMSSG+AYQRQSQR  SQSANSVARSRT  
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQ

Query:  ESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
                         HFKRDCPQLRVAVRRDQGVESHTVEQPRIS A G+GTSG R
Subjt:  ESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

A0A5A7URC7 Gag/pol protein1.4e-10983.59Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE---------------------TFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASE
        MY IERLKKLGATVFEG TDP +TE                     TFRGIFEEKYYPTTY EAKRDEFL+LKQ SLSV EYERKY ELSRYAEMIVASE
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE---------------------TFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARS
        SDRCRRFERGLRFEIRT +TAIAKW NFSQLVETALRVEQSIVEEK  MELSRGVSTTSGCQDFK RSGGKPLRQMSSGSAYQRQSQR  SQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARS

Query:  RTGQESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR
        RTGQESVASES+RTPCCGQ GHFKRDCPQLRVAVRRDQGVESHTVEQPRISTA G+GTSG R
Subjt:  RTGQESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTATGKGTSGTR

A0A5D3BTP3 Reverse transcriptase7.5e-9865.76Show/hide
Query:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MY IERLKKLGATVFEGSTDP D E                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYEIERLKKLGATVFEGSTDPTDTE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------
        L+LKQ SLSVA+YERKY ELSRYAEMIVASESDRC RFERGLRFEIRT VTAIAKW NFSQLVETALRV+QSIVEEK AMELSRGVSTT           
Subjt:  LKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQLVETALRVEQSIVEEKLAMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSSGSAYQRQS+R  SQ ANSVARSRTGQESVASESKRTPC                    CG+ GHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPC--------------------CGQIGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTATGKGTSGTR
         VRRDQGVESHTVEQ RISTA G+ TSG R
Subjt:  AVRRDQGVESHTVEQPRISTATGKGTSGTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGCTCCACGGATCCAACTGACACCGAGACGTTCAGAGGCATATTTGAGGAAAAGTATTATCC
CACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGAAGCTGAAACAAAGGTCACTTTCGGTGGCCGAGTACGAGAGGAAGTATATCGAGCTTTCGCGGTATGCTGAAA
TGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCTCAGTGACCGCTATTGCCAAGTGGACAAATTTTTCCCAGCTA
GTAGAGACTGCTTTACGTGTGGAGCAGAGTATTGTAGAGGAAAAGTTGGCAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGGTTGTCAAGACTTCAAGCGTCGATC
GGGTGGCAAACCATTGAGGCAGATGAGTTCAGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGTTTTCAGTCAGTCTGCGAACTCAGTAGCAAGATCGCGGACGGGTCAGG
AGTCTGTTGCTAGTGAATCCAAGAGAACCCCATGTTGTGGACAAATAGGACATTTCAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCGGAGGGACCAGGGAGTTGAG
TCCCACACAGTTGAGCAGCCGAGAATCTCAACAGCCACAGGAAAGGGAACTAGTGGTACAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGCTCCACGGATCCAACTGACACCGAGACGTTCAGAGGCATATTTGAGGAAAAGTATTATCC
CACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGAAGCTGAAACAAAGGTCACTTTCGGTGGCCGAGTACGAGAGGAAGTATATCGAGCTTTCGCGGTATGCTGAAA
TGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCTCAGTGACCGCTATTGCCAAGTGGACAAATTTTTCCCAGCTA
GTAGAGACTGCTTTACGTGTGGAGCAGAGTATTGTAGAGGAAAAGTTGGCAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGGTTGTCAAGACTTCAAGCGTCGATC
GGGTGGCAAACCATTGAGGCAGATGAGTTCAGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGTTTTCAGTCAGTCTGCGAACTCAGTAGCAAGATCGCGGACGGGTCAGG
AGTCTGTTGCTAGTGAATCCAAGAGAACCCCATGTTGTGGACAAATAGGACATTTCAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCGGAGGGACCAGGGAGTTGAG
TCCCACACAGTTGAGCAGCCGAGAATCTCAACAGCCACAGGAAAGGGAACTAGTGGTACAAGATAA
Protein sequenceShow/hide protein sequence
MYEIERLKKLGATVFEGSTDPTDTETFRGIFEEKYYPTTYCEAKRDEFLKLKQRSLSVAEYERKYIELSRYAEMIVASESDRCRRFERGLRFEIRTSVTAIAKWTNFSQL
VETALRVEQSIVEEKLAMELSRGVSTTSGCQDFKRRSGGKPLRQMSSGSAYQRQSQRVFSQSANSVARSRTGQESVASESKRTPCCGQIGHFKRDCPQLRVAVRRDQGVE
SHTVEQPRISTATGKGTSGTR