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Pay0017675 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017675
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCCR4-NOT transcription complex subunit 1
Genome locationchr01:656055..662139
RNA-Seq ExpressionPay0017675
SyntenyPay0017675
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031342.1 putative carbohydrate esterase [Cucumis melo var. makuwa]1.8e-6173.3Show/hide
Query:  RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSEAWMLKNLLMLCLTLSAINWDIVSQQRVYE--------
        RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE     NLLMLCLTLSAINWDIVSQQRVYE        
Subjt:  RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSEAWMLKNLLMLCLTLSAINWDIVSQQRVYE--------

Query:  --------------------------------------EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA
                                              EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA
Subjt:  --------------------------------------EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA

KAA0048830.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]1.6e-0982.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

KAA0048830.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]8.8e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

TYK20782.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]1.6e-0982.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

TYK20782.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]8.8e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

XP_008437787.1 PREDICTED: CCR4-NOT transcription complex subunit 1 [Cucumis melo]1.6e-0982.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

XP_038898360.1 CCR4-NOT transcription complex subunit 1 [Benincasa hispida]5.2e-2191.67Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

XP_038898360.1 CCR4-NOT transcription complex subunit 1 [Benincasa hispida]4.5e-0980.43Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SS+Q LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

XP_038898360.1 CCR4-NOT transcription complex subunit 1 [Benincasa hispida]8.8e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

TrEMBL top hitse value%identityAlignment
A0A1S3AUU2 CCR4-NOT transcription complex subunit 17.5e-1082.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

A0A1S3AUU2 CCR4-NOT transcription complex subunit 15.2e-1983.33Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ RE++GNPDFSNKDVGASQTQM AE K  IMSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

A0A5A7SJW6 Putative carbohydrate esterase8.5e-6273.3Show/hide
Query:  RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSEAWMLKNLLMLCLTLSAINWDIVSQQRVYE--------
        RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE     NLLMLCLTLSAINWDIVSQQRVYE        
Subjt:  RDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSEAWMLKNLLMLCLTLSAINWDIVSQQRVYE--------

Query:  --------------------------------------EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA
                                              EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA
Subjt:  --------------------------------------EPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA

A0A5A7U0A1 CCR4-NOT transcription complex subunit 17.5e-1082.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

A0A5A7U0A1 CCR4-NOT transcription complex subunit 14.3e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

A0A5D3DB11 CCR4-NOT transcription complex subunit 14.3e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

A0A5D3DB11 CCR4-NOT transcription complex subunit 17.5e-1082.61Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SSTQ LPSPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

A0A5D3DB11 CCR4-NOT transcription complex subunit 14.3e-2190Show/hide
Query:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKDVGASQTQM AEVKSG+MSSLNQVELPLEVATPSNSGNHTHLLS+
Subjt:  EKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

A0A6J1IQF9 CCR4-NOT transcription complex subunit 1-like1.9e-0878.26Show/hide
Query:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA
        +EP SS+Q L SPIT DRLAT+MSEPS TTRDALDKFQVISQK+ A
Subjt:  EEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02080.1 transcription regulators9.1e-0850.79Show/hide
Query:  EKGREIDGNPDFSNKDVGA---SQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKD G    SQ QM  E K+  +S L Q++LPL+VA   N+   + LLS+
Subjt:  EKGREIDGNPDFSNKDVGA---SQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE

AT1G02080.2 transcription regulators9.1e-0850.79Show/hide
Query:  EKGREIDGNPDFSNKDVGA---SQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE
        ++ REIDGNPDFSNKD G    SQ QM  E K+  +S L Q++LPL+VA   N+   + LLS+
Subjt:  EKGREIDGNPDFSNKDVGA---SQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACAAATTATCTCCCTCGCCAATCTCTCCAGCGTTGTCTTCTTCCGTCTCCATGCACGGTGGTCCGTGCACGAATTAGGGTTTCGTGTCTCGTATCGTGGCTA
TAGAGATATTGAGAAGGGCAGAGAAATTGATGGCAATCCTGATTTTTCGAACAAGGACGTTGGAGCATCTCAGACACAGATGTTTGCGGAAGTGAAATCCGGCATAATGT
CTTCTTTAAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACGCCATCAAATTCTGGAAATCATACTCACCTGTTATCTGAGGCATGGATGCTCAAGAACCTCTTGATGTTG
TGCCTGACGCTCTCCGCCATAAACTGGGACATCGTTTCACAACAACGAGTTTATGAGGAACCTGTATCCTCTACCCAGCACTTGCCCTCACCAATCACTATCGATCGGCT
TGCAACTTCTATGTCTGAACCCTCATTTACTACTAGAGATGCATTGGATAAATTTCAAGTTATTTCTCAGAAGGTTGGCGCTACTCTTAAGCCTAACTATGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTACAAATTATCTCCCTCGCCAATCTCTCCAGCGTTGTCTTCTTCCGTCTCCATGCACGGTGGTCCGTGCACGAATTAGGGTTTCGTGTCTCGTATCGTGGCTA
TAGAGATATTGAGAAGGGCAGAGAAATTGATGGCAATCCTGATTTTTCGAACAAGGACGTTGGAGCATCTCAGACACAGATGTTTGCGGAAGTGAAATCCGGCATAATGT
CTTCTTTAAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACGCCATCAAATTCTGGAAATCATACTCACCTGTTATCTGAGGCATGGATGCTCAAGAACCTCTTGATGTTG
TGCCTGACGCTCTCCGCCATAAACTGGGACATCGTTTCACAACAACGAGTTTATGAGGAACCTGTATCCTCTACCCAGCACTTGCCCTCACCAATCACTATCGATCGGCT
TGCAACTTCTATGTCTGAACCCTCATTTACTACTAGAGATGCATTGGATAAATTTCAAGTTATTTCTCAGAAGGTTGGCGCTACTCTTAAGCCTAACTATGCTGCTTAA
Protein sequenceShow/hide protein sequence
MALQIISLANLSSVVFFRLHARWSVHELGFRVSYRGYRDIEKGREIDGNPDFSNKDVGASQTQMFAEVKSGIMSSLNQVELPLEVATPSNSGNHTHLLSEAWMLKNLLML
CLTLSAINWDIVSQQRVYEEPVSSTQHLPSPITIDRLATSMSEPSFTTRDALDKFQVISQKVGATLKPNYAA