; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0017702 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017702
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr05:19218993..19220426
RNA-Seq ExpressionPay0017702
SyntenyPay0017702
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026101.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.5e-10248.68Show/hide
Query:  YSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG---------------------------------------------
        YS  +    +H +P    Q VVG+KWVFRLK +TDGSI  YK R+VAKGFHQH G                                             
Subjt:  YSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG---------------------------------------------

Query:  -TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFS
          VY+ +PPGYVHPS+P Y                                NS+S+SSLFI R  +S++LLLVYVDD++VT ND+ LI  L++SLDKQF+
Subjt:  -TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFS

Query:  LKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRP
        LKDLG LTYFLGFQ++Y  SGF+LNQEKY+ DLL KLQ  DLKP  SPSV GK+LS   GT L DPF+YRSTI ALQ LT+TRPDI+YIVN LS      
Subjt:  LKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRP

Query:  INAHWQAKGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSA
                  DL I+AY D +WASNIDDRKS+AAYCVFIGNNLVS    +                                       KPVIW D +SA
Subjt:  INAHWQAKGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSA

Query:  GTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTKFGTDS
        G LA NPVFHARTK+I+IDVHFVRD VL+G ++VRYVPS DQLADCLTK   DS
Subjt:  GTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTKFGTDS

KAA0051519.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.5e-10260.74Show/hide
Query:  VYIQKPPGYVHPSFPNYNSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLL
        VY+ +PPGYVH S+PNY                            +TGND+ LI  L++SLDKQF+LKDLG LTYFLGFQ++Y +SGF+LNQ KY+ DLL
Subjt:  VYIQKPPGYVHPSFPNYNSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLL

Query:  QKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSIT
         KLQ  DLKP  S SV GK+L    GT L DPF+YR+TI ALQYLT+TRPDI+YI+N LSQFLQ+P + HWQA                   +G DL+I+
Subjt:  QKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSIT

Query:  AYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKH
        AYSDA+WASNI+DRKS+AAYC+FIGN LV WSSKKQTVVARSSTKSEYRALAL ASEVIWLKQLL +L      K VIW D +S+G LA NPVFHARTKH
Subjt:  AYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKH

Query:  IKIDVHFVRDHVLRGTIDVRYVPSAD
        I+IDVHFVRD VL+G ++VRYV S D
Subjt:  IKIDVHFVRDHVLRGTIDVRYVPSAD

KAA0057477.1 Copia protein [Cucumis melo var. makuwa]1.2e-10958.29Show/hide
Query:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI
        +PPGYV+ +FP+Y                                NSKS+SSLFI R  + +IL LVYVDDV+VT N++  I  L+  LD +F+LKDLG 
Subjt:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI

Query:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ
        L YFL FQIHY +S F++NQEKY+DDLL KLQ  DLKP  SPSV GK LS+S+G  L DPF+Y+STI ALQYLT+TR +ISYIVN+LSQFLQ+P + HWQ
Subjt:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ

Query:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL
        A                     TDLSITA+SDA+WASNI+DRKSVAAYCVF+GNNL SWS KKQ VVARSST+SEYRALA A SE++W+ QLL +L++ +
Subjt:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL

Query:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          KP++W D +S G LATNPVFHARTKHI+IDVHFV D VL   ++VRY+PS+DQLADCLTK
Subjt:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

TYK30173.1 Copia protein [Cucumis melo var. makuwa]1.2e-10958.29Show/hide
Query:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI
        +PPGYV+ +FP+Y                                NSKS+SSLFI R  + +IL LVYVDDV+VT N++  I  L+  LD +F+LKDLG 
Subjt:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI

Query:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ
        L YFL FQIHY +S F++NQEKY+DDLL KLQ  DLKP  SPSV GK LS+S+G  L DPF+Y+STI ALQYLT+TR +ISYIVN+LSQFLQ+P + HWQ
Subjt:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ

Query:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL
        A                     TDLSITA+SDA+WASNI+DRKSVAAYCVF+GNNL SWS KKQ VVARSST+SEYRALA A SE++W+ QLL +L++ +
Subjt:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL

Query:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          KP++W D +S G LATNPVFHARTKHI+IDVHFV D VL   ++VRY+PS+DQLADCLTK
Subjt:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

XP_016902198.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo]2.5e-11057.03Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------
        MDEEYSALLKA TW LVPPSPSQ VVG+KWVFRLK +TDGSI  YK R+VAKGFHQH G                                         
Subjt:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------

Query:  -----TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLD
              VY+ +PPGYVHPS+PNY                                NS+S+SSLFI R  +S++LLLVYVDD++VTGND+ LI  L++SLD
Subjt:  -----TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLD

Query:  KQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQF
        KQF+LKDLG LTYFLGFQ++Y +SGF+LNQEKY+ DLL KLQ  DLKPT SPSV GK+LS   GT L DPF+YRSTI ALQ LT+TRPDI+YIVN LSQF
Subjt:  KQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQF

Query:  LQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALAL
        LQ+P N HWQA                   +G DL I+AY D +WASNIDDRKS+AAYCVFIGNNLVSWSSKKQTVVARSST+S+YRALAL
Subjt:  LQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALAL

TrEMBL top hitse value%identityAlignment
A0A1S4E1U4 uncharacterized mitochondrial protein AtMg00810-like isoform X21.2e-11057.03Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------
        MDEEYSALLKA TW LVPPSPSQ VVG+KWVFRLK +TDGSI  YK R+VAKGFHQH G                                         
Subjt:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------

Query:  -----TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLD
              VY+ +PPGYVHPS+PNY                                NS+S+SSLFI R  +S++LLLVYVDD++VTGND+ LI  L++SLD
Subjt:  -----TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLD

Query:  KQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQF
        KQF+LKDLG LTYFLGFQ++Y +SGF+LNQEKY+ DLL KLQ  DLKPT SPSV GK+LS   GT L DPF+YRSTI ALQ LT+TRPDI+YIVN LSQF
Subjt:  KQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQF

Query:  LQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALAL
        LQ+P N HWQA                   +G DL I+AY D +WASNIDDRKS+AAYCVFIGNNLVSWSSKKQTVVARSST+S+YRALAL
Subjt:  LQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALAL

A0A5A7US38 Copia protein6.0e-11058.29Show/hide
Query:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI
        +PPGYV+ +FP+Y                                NSKS+SSLFI R  + +IL LVYVDDV+VT N++  I  L+  LD +F+LKDLG 
Subjt:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI

Query:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ
        L YFL FQIHY +S F++NQEKY+DDLL KLQ  DLKP  SPSV GK LS+S+G  L DPF+Y+STI ALQYLT+TR +ISYIVN+LSQFLQ+P + HWQ
Subjt:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ

Query:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL
        A                     TDLSITA+SDA+WASNI+DRKSVAAYCVF+GNNL SWS KKQ VVARSST+SEYRALA A SE++W+ QLL +L++ +
Subjt:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL

Query:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          KP++W D +S G LATNPVFHARTKHI+IDVHFV D VL   ++VRY+PS+DQLADCLTK
Subjt:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

A0A5D3B8X5 Putative mitochondrial protein4.6e-10248.68Show/hide
Query:  YSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG---------------------------------------------
        YS  +    +H +P    Q VVG+KWVFRLK +TDGSI  YK R+VAKGFHQH G                                             
Subjt:  YSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG---------------------------------------------

Query:  -TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFS
          VY+ +PPGYVHPS+P Y                                NS+S+SSLFI R  +S++LLLVYVDD++VT ND+ LI  L++SLDKQF+
Subjt:  -TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFS

Query:  LKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRP
        LKDLG LTYFLGFQ++Y  SGF+LNQEKY+ DLL KLQ  DLKP  SPSV GK+LS   GT L DPF+YRSTI ALQ LT+TRPDI+YIVN LS      
Subjt:  LKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRP

Query:  INAHWQAKGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSA
                  DL I+AY D +WASNIDDRKS+AAYCVFIGNNLVS    +                                       KPVIW D +SA
Subjt:  INAHWQAKGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSA

Query:  GTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTKFGTDS
        G LA NPVFHARTK+I+IDVHFVRD VL+G ++VRYVPS DQLADCLTK   DS
Subjt:  GTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTKFGTDS

A0A5D3DKK9 Putative mitochondrial protein4.6e-10260.74Show/hide
Query:  VYIQKPPGYVHPSFPNYNSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLL
        VY+ +PPGYVH S+PNY                            +TGND+ LI  L++SLDKQF+LKDLG LTYFLGFQ++Y +SGF+LNQ KY+ DLL
Subjt:  VYIQKPPGYVHPSFPNYNSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLL

Query:  QKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSIT
         KLQ  DLKP  S SV GK+L    GT L DPF+YR+TI ALQYLT+TRPDI+YI+N LSQFLQ+P + HWQA                   +G DL+I+
Subjt:  QKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSIT

Query:  AYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKH
        AYSDA+WASNI+DRKS+AAYC+FIGN LV WSSKKQTVVARSSTKSEYRALAL ASEVIWLKQLL +L      K VIW D +S+G LA NPVFHARTKH
Subjt:  AYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKH

Query:  IKIDVHFVRDHVLRGTIDVRYVPSAD
        I+IDVHFVRD VL+G ++VRYV S D
Subjt:  IKIDVHFVRDHVLRGTIDVRYVPSAD

A0A5D3E251 Copia protein6.0e-11058.29Show/hide
Query:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI
        +PPGYV+ +FP+Y                                NSKS+SSLFI R  + +IL LVYVDDV+VT N++  I  L+  LD +F+LKDLG 
Subjt:  KPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGI

Query:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ
        L YFL FQIHY +S F++NQEKY+DDLL KLQ  DLKP  SPSV GK LS+S+G  L DPF+Y+STI ALQYLT+TR +ISYIVN+LSQFLQ+P + HWQ
Subjt:  LTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQ

Query:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL
        A                     TDLSITA+SDA+WASNI+DRKSVAAYCVF+GNNL SWS KKQ VVARSST+SEYRALA A SE++W+ QLL +L++ +
Subjt:  A-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNL

Query:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          KP++W D +S G LATNPVFHARTKHI+IDVHFV D VL   ++VRY+PS+DQLADCLTK
Subjt:  PLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-3432.89Show/hide
Query:  ILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFL
        I +L+YVDDVV+   D   ++   R L ++F + DL  + +F+G +I   +    L+Q  YV  +L K   ++     +P  +  +  L       +   
Subjt:  ILLLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFL

Query:  YRSTIRALQY-LTHTRPDISYIVNNLSQFLQRPINAHWQ--------AKGT-------------DLSITAYSDANWASNIDDRKSVAAYCV-FIGNNLVS
         RS I  L Y +  TRPD++  VN LS++  +  +  WQ         KGT             +  I  Y D++WA +  DRKS   Y       NL+ 
Subjt:  YRSTIRALQY-LTHTRPDISYIVNNLSQFLQRPINAHWQ--------AKGT-------------DLSITAYSDANWASNIDDRKSVAAYCV-FIGNNLVS

Query:  WSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLAD
        W++K+Q  VA SST++EY AL  A  E +WLK LL  +N+ L     I+ D     ++A NP  H R KHI I  HF R+ V    I + Y+P+ +QLAD
Subjt:  WSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLAD

Query:  CLTK
          TK
Subjt:  CLTK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.2e-4429.28Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------
        M EE  +L K  T+ LV     ++ +  KWVF+LK + D  +  YK RLV KGF Q  G                                         
Subjt:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------

Query:  -----TVYIQKPPGYVHPSFPNYNSKSNSSLFILR---------------------------------CRSSIILLLVYVDDVVVTGNDTKLIDELVRSL
              +Y+++P G+      +   K N SL+ L+                                   ++ I+LL+YVDD+++ G D  LI +L   L
Subjt:  -----TVYIQKPPGYVHPSFPNYNSKSNSSLFILR---------------------------------CRSSIILLLVYVDDVVVTGNDTKLIDELVRSL

Query:  DKQFSLKDLGILTYFLGFQI--HYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLS----------EGTSLADPFLYRSTIRALQY-LTHT
         K F +KDLG     LG +I          L+QEKY++ +L++   ++ KP  +P +AG HL LS          +G     P  Y S + +L Y +  T
Subjt:  DKQFSLKDLGILTYFLGFQI--HYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLS----------EGTSLADPFLYRSTIRALQY-LTHT

Query:  RPDISYIVNNLSQFLQRPINAHWQA------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYR
        RPDI++ V  +S+FL+ P   HW+A                   G+D  +  Y+DA+ A +ID+RKS   Y        +SW SK Q  VA S+T++EY 
Subjt:  RPDISYIVNNLSQFLQRPINAHWQA------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYR

Query:  ALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
        A      E+IWLK+ L +L ++   + V++ D  SA  L+ N ++HARTKHI +  H++R+ V   ++ V  + + +  AD LTK
Subjt:  ALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

P92519 Uncharacterized mitochondrial protein AtMg008101.6e-3840.18Show/hide
Query:  LLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYR
        LL+YVDD+++TG+   L++ L+  L   FS+KDLG + YFLG QI    SG  L+Q KY + +L      D KP  +P     + S+S      DP  +R
Subjt:  LLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYR

Query:  STIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQ
        S + ALQYLT TRPDISY VN + Q +  P  A +                     K + L++ A+ D++WA     R+S   +C F+G N++SWS+K+Q
Subjt:  STIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQ

Query:  TVVARSSTKSEYRALALAASEVIW
          V+RSST++EYRALAL A+E+ W
Subjt:  TVVARSSTKSEYRALALAASEVIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-8138.48Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQ-KVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG----------------------------------------
        M  E +A +   TW LVPP PS   +VG +W+F  K N+DGS+  YK RLVAKG++Q  G                                        
Subjt:  MDEEYSALLKAQTWHLVPPSPSQ-KVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG----------------------------------------

Query:  ------TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSL
               VY+ +PPG++    PNY                                NS S++SLF+L+   SI+ +LVYVDD+++TGND  L+   + +L
Subjt:  ------TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSL

Query:  DKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQ
         ++FS+KD   L YFLG +     +G  L+Q +Y+ DLL +      KP  +P      LSL  GT L DP  YR  + +LQYL  TRPDISY VN LSQ
Subjt:  DKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQ

Query:  FLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWL
        F+  P   H QA                   KG  LS+ AYSDA+WA + DD  S   Y V++G++ +SWSSKKQ  V RSST++EYR++A  +SE+ W+
Subjt:  FLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWL

Query:  KQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          LL +L + L   PVI+ D V A  L  NPVFH+R KHI ID HF+R+ V  G + V +V + DQLAD LTK
Subjt:  KQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.6e-8037.84Show/hide
Query:  MDEEYSALLKAQTWHLV-PPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG----------------------------------------
        M  E +A +   TW LV PP PS  +VG +W+F  K N+DGS+  YK RLVAKG++Q  G                                        
Subjt:  MDEEYSALLKAQTWHLV-PPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG----------------------------------------

Query:  ------TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSL
               VY+ +PPG+V    P+Y                                NS S++SLF+L+   SII +LVYVDD+++TGNDT L+   + +L
Subjt:  ------TVYIQKPPGYVHPSFPNY--------------------------------NSKSNSSLFILRCRSSIILLLVYVDDVVVTGNDTKLIDELVRSL

Query:  DKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQ
         ++FS+K+   L YFLG +      G  L+Q +Y  DLL +      KP  +P      L+L  GT L DP  YR  + +LQYL  TRPD+SY VN LSQ
Subjt:  DKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLSQ

Query:  FLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWL
        ++  P + HW A                   KG  LS+ AYSDA+WA + DD  S   Y V++G++ +SWSSKKQ  V RSST++EYR++A  +SE+ W+
Subjt:  FLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWL

Query:  KQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK
          LL +L + L   PVI+ D V A  L  NPVFH+R KHI +D HF+R+ V  G + V +V + DQLAD LTK
Subjt:  KQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-5832.96Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------
        MD+E  A+    TW +    P++K +G KWV+++K N+DG+I+ YK RLVAKG+ Q  G                                         
Subjt:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLG-----------------------------------------

Query:  -----TVYIQKPPGY-------VHPSFPNYNSKS----------------------------NSSLFILRCRSSIIL-LLVYVDDVVVTGNDTKLIDELV
              +Y++ PPGY       + P+   Y  KS                            +   + L+  +++ L +LVYVDD+++  N+   +DEL 
Subjt:  -----TVYIQKPPGY-------VHPSFPNYNSKS----------------------------NSSLFILRCRSSIIL-LLVYVDDVVVTGNDTKLIDELV

Query:  RSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNN
          L   F L+DLG L YFLG +I    +G  + Q KY  DLL +      KP+  P       S   G    D   YR  I  L YL  TR DIS+ VN 
Subjt:  RSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNN

Query:  LSQFLQRPINAHWQA--------KGT-----------DLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEV
        LSQF + P  AH QA        KGT           ++ +  +SDA++ S  D R+S   YC+F+G +L+SW SKKQ VV++SS ++EYRAL+ A  E+
Subjt:  LSQFLQRPINAHWQA--------KGT-----------DLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEV

Query:  IWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRD
        +WL Q   +L + L    +++ D  +A  +ATN VFH RTKHI+ D H VR+
Subjt:  IWLKQLLFQLNVNLPLKPVIWYDKVSAGTLATNPVFHARTKHIKIDVHFVRD

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.4e-0738.27Show/hide
Query:  YLTHTRPDISYIVNNLSQFLQRPINAHWQA--------KGT-----------DLSITAYSDANWASNIDDRKSVAAYCVFI
        YLT TRPD+++ VN LSQF      A  QA        KGT           DL + A++D++WAS  D R+SV  +C  +
Subjt:  YLTHTRPDISYIVNNLSQFLQRPINAHWQA--------KGT-----------DLSITAYSDANWASNIDDRKSVAAYCVFI

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-3940.18Show/hide
Query:  LLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYR
        LL+YVDD+++TG+   L++ L+  L   FS+KDLG + YFLG QI    SG  L+Q KY + +L      D KP  +P     + S+S      DP  +R
Subjt:  LLVYVDDVVVTGNDTKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYR

Query:  STIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQ
        S + ALQYLT TRPDISY VN + Q +  P  A +                     K + L++ A+ D++WA     R+S   +C F+G N++SWS+K+Q
Subjt:  STIRALQYLTHTRPDISYIVNNLSQFLQRPINAHWQA-------------------KGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQ

Query:  TVVARSSTKSEYRALALAASEVIW
          V+RSST++EYRALAL A+E+ W
Subjt:  TVVARSSTKSEYRALALAASEVIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)6.7e-1348.44Show/hide
Query:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLGTVYIQ
        M EE  AL + +TW LVPP  +Q ++G KWVF+ K ++DG++   K RLVAKGFHQ  G  +++
Subjt:  MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLGTVYIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAATATTCTGCCTTACTTAAGGCGCAGACATGGCATCTTGTACCACCATCACCATCTCAAAAGGTTGTTGGTAACAAGTGGGTGTTTCGCTTAAAGTGCAA
TACCGATGGCTCCATTCAATGGTACAAGACTCGCTTAGTAGCTAAAGGTTTCCATCAACATCTAGGAACTGTGTATATACAAAAACCACCCGGGTATGTTCATCCTTCCT
TTCCCAATTATAACTCCAAATCTAACTCATCCTTGTTTATTCTTCGATGTCGGAGTTCCATAATTTTATTGTTAGTATACGTTGATGATGTCGTTGTTACTGGCAATGAT
ACTAAGTTAATTGACGAGCTGGTTCGGTCCCTTGACAAGCAGTTTTCCTTGAAGGACTTGGGAATCTTAACTTATTTTTTGGGGTTCCAAATTCATTATTTTGATTCTGG
CTTTGTTCTCAATCAAGAAAAATATGTTGACGATTTACTACAGAAATTGCAGTTTCAGGACTTAAAACCTACCCATTCACCGAGTGTTGCCGGCAAACATTTATCTTTGT
CTGAAGGTACTTCGCTTGCTGATCCATTTCTATATAGAAGTACAATAAGGGCTCTTCAGTATTTAACTCACACTCGTCCGGATATCTCTTATATTGTAAACAATTTGAGT
CAATTTCTCCAAAGACCCATTAATGCACATTGGCAAGCTAAAGGTACTGATCTATCTATCACTGCATATTCAGATGCCAATTGGGCATCCAACATTGATGATAGAAAATC
GGTGGCAGCATATTGTGTTTTCATTGGCAATAATCTTGTGTCTTGGTCATCCAAGAAACAAACAGTGGTTGCTCGTTCGAGTACAAAATCTGAGTATCGTGCCTTGGCTT
TGGCTGCGTCTGAAGTTATCTGGTTGAAACAACTCTTATTCCAGTTGAATGTAAATCTTCCTCTTAAACCTGTAATTTGGTACGATAAGGTCAGTGCAGGCACCCTTGCT
ACAAATCCGGTCTTTCATGCTCGCACTAAACATATAAAAATTGATGTACACTTTGTTCGGGATCATGTTCTTCGGGGTACTATTGATGTTCGATACGTTCCTTCCGCTGA
CCAGCTAGCTGACTGCTTAACCAAGTTCGGCACTGATTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGAATATTCTGCCTTACTTAAGGCGCAGACATGGCATCTTGTACCACCATCACCATCTCAAAAGGTTGTTGGTAACAAGTGGGTGTTTCGCTTAAAGTGCAA
TACCGATGGCTCCATTCAATGGTACAAGACTCGCTTAGTAGCTAAAGGTTTCCATCAACATCTAGGAACTGTGTATATACAAAAACCACCCGGGTATGTTCATCCTTCCT
TTCCCAATTATAACTCCAAATCTAACTCATCCTTGTTTATTCTTCGATGTCGGAGTTCCATAATTTTATTGTTAGTATACGTTGATGATGTCGTTGTTACTGGCAATGAT
ACTAAGTTAATTGACGAGCTGGTTCGGTCCCTTGACAAGCAGTTTTCCTTGAAGGACTTGGGAATCTTAACTTATTTTTTGGGGTTCCAAATTCATTATTTTGATTCTGG
CTTTGTTCTCAATCAAGAAAAATATGTTGACGATTTACTACAGAAATTGCAGTTTCAGGACTTAAAACCTACCCATTCACCGAGTGTTGCCGGCAAACATTTATCTTTGT
CTGAAGGTACTTCGCTTGCTGATCCATTTCTATATAGAAGTACAATAAGGGCTCTTCAGTATTTAACTCACACTCGTCCGGATATCTCTTATATTGTAAACAATTTGAGT
CAATTTCTCCAAAGACCCATTAATGCACATTGGCAAGCTAAAGGTACTGATCTATCTATCACTGCATATTCAGATGCCAATTGGGCATCCAACATTGATGATAGAAAATC
GGTGGCAGCATATTGTGTTTTCATTGGCAATAATCTTGTGTCTTGGTCATCCAAGAAACAAACAGTGGTTGCTCGTTCGAGTACAAAATCTGAGTATCGTGCCTTGGCTT
TGGCTGCGTCTGAAGTTATCTGGTTGAAACAACTCTTATTCCAGTTGAATGTAAATCTTCCTCTTAAACCTGTAATTTGGTACGATAAGGTCAGTGCAGGCACCCTTGCT
ACAAATCCGGTCTTTCATGCTCGCACTAAACATATAAAAATTGATGTACACTTTGTTCGGGATCATGTTCTTCGGGGTACTATTGATGTTCGATACGTTCCTTCCGCTGA
CCAGCTAGCTGACTGCTTAACCAAGTTCGGCACTGATTCTTAG
Protein sequenceShow/hide protein sequence
MDEEYSALLKAQTWHLVPPSPSQKVVGNKWVFRLKCNTDGSIQWYKTRLVAKGFHQHLGTVYIQKPPGYVHPSFPNYNSKSNSSLFILRCRSSIILLLVYVDDVVVTGND
TKLIDELVRSLDKQFSLKDLGILTYFLGFQIHYFDSGFVLNQEKYVDDLLQKLQFQDLKPTHSPSVAGKHLSLSEGTSLADPFLYRSTIRALQYLTHTRPDISYIVNNLS
QFLQRPINAHWQAKGTDLSITAYSDANWASNIDDRKSVAAYCVFIGNNLVSWSSKKQTVVARSSTKSEYRALALAASEVIWLKQLLFQLNVNLPLKPVIWYDKVSAGTLA
TNPVFHARTKHIKIDVHFVRDHVLRGTIDVRYVPSADQLADCLTKFGTDS