| GenBank top hits | e value | %identity | Alignment |
|---|
| AAK84483.1 putative copia-like polyprotein [Solanum lycopersicum] | 3.9e-168 | 64.01 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MSTGI +EHPVAHVHTQNGLAES IK LQLIARPLLMR KL +S+WGHAILHAA+L EPNISHLR+FGCAVYVPI PPQR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNET-NSTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
KMGPQRRLGIYV +ESPSII+Y EP+ GD+F RFADCHF+E+ TLGG K L EI WN S LSHLDPRT QCE EVQ+II+LQ++ANQ+PDAFT+
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNET-NSTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
Query: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ-------------------------------ETQVY---------EDNNEISINYTMTGKRWNR
++TKSYIPA NAP R++IPT Q+ NES K+ ETQV NNEIS+NY T K WNR
Subjt: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ-------------------------------ETQVY---------EDNNEISINYTMTGKRWNR
Query: INVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFS
NVV+DNIFAYNVA I+ ++ED EPKSV ECR R DWPKWK+AIQAEL SL KRE FGP++ TP+G+KPVG+KW+FVRKRNE EV RYKARL AQGFS
Subjt: INVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFS
Query: QRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
QRPGIDY ETYSPVVDAIT RYLI+LAV E L+M LMDVVT YLYGSL++ I++KIPE FK+PE+Y +SRE CSIKLQ+SLYGLKQSG
Subjt: QRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| CAN60947.1 hypothetical protein VITISV_015758 [Vitis vinifera] | 2.5e-167 | 63.11 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GINIEHPVAH HTQNGLAESFIK LQLIARPLLM+ KLP S WGHAI+H A+L +PNI HLRIFGCAVYVPI P Q
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
KMGPQRRLG+YV F+SPSII Y EPL GDVFTARFADCHFNE+ G K + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ NQ+PDAF
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
Query: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK-------------------------------------QETQVYEDNNEISINYTMTGKRWNRI
DTKKVTKS+IPAAN P+RI++P Q+ NES +R K +E QV E N EIS++Y TG++W+R
Subjt: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK-------------------------------------QETQVYEDNNEISINYTMTGKRWNRI
Query: NVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQ
N+V++NIFA+ VA +II +ED EP++V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KWVFVRKRNENNE+ RYKARL AQGFSQ
Subjt: NVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQ
Query: RPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
RPGIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IY+KIPEGFK+P++ N+ R + SIKLQRSLYGLKQSG
Subjt: RPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| RVW26456.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-166 | 59.39 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GINIEHPVAH HTQNGLAESFIK LQLIARPLLM+ KLP S WGHAI+HAA+L +PNISHLRIFGCAVYVPI P QR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
KMGPQRRLG+YV F+SPSII+Y EPL GDVFTARFADCHFNE+ G K + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ NQ+PDAF
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
Query: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
DTKKVTKS+IPAAN P+RI++P Q+ NES +R K +E Q+ +
Subjt: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
Query: ---------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKG
+N EIS++Y TG++W+R N+V++NIFA+ VA +II +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+
Subjt: ---------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKG
Query: VKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYN
VKPVG+KWVFVRKRNENNE+ RYKARL AQGFSQRPGIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IY+KIPEGFK+P++ N
Subjt: VKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYN
Query: SNSRELCSIKLQRSLYGLKQSG
+ R + SIKLQRSLYGLKQSG
Subjt: SNSRELCSIKLQRSLYGLKQSG
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| RVW51062.1 Copia protein [Vitis vinifera] | 3.6e-166 | 59.39 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GINIEHPVAH HTQNGLAESFIK LQLIARPLLM+ KLP S WGHAI+H A+L +PNISHLRIFGCAVYVPI P QR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
KMGPQRRLG+YV F+SPSII+Y EPL GDVFTARFADCHFNE+ G K + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
Query: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
DTKKVTKS+IPAAN P+RI++P Q+ NES +R K +E Q+ +
Subjt: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
Query: ---------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKG
+N EIS++Y TG++W+R N+V++NIFA+ VA +II +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+
Subjt: ---------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKG
Query: VKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYN
VKPVG+KWVFVRKRNENNE+ RYKARL AQGFSQRPGIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IY+KIPEGFK+P++ N
Subjt: VKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYN
Query: SNSRELCSIKLQRSLYGLKQSG
+ R + SIKLQRSLYGLKQSG
Subjt: SNSRELCSIKLQRSLYGLKQSG
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| RVX16158.1 Copia protein [Vitis vinifera] | 4.7e-166 | 58.65 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GINIEHPVAH HTQNGLAESFIK LQLIARPLLM+ KLP S WGHAI+HAA+L +PNISHLRIFGCAVYVPI P QR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
KMGPQRRLG+YV F+SPSIIRY EPL GDVFTARFADCHFNE+ G K + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
Query: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
DTKKVTKS+IPAAN P+RI++P Q+ NES +R K +E Q+ +
Subjt: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK------------------------------------------QETQVYE--------------
Query: -------------------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREV
+N EIS++Y TG++W+R N+V++NIFA+ VA +II +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREV
Subjt: -------------------------DNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREV
Query: FGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIP
FGPVV TP+ VKPVG+KWVFVRKRNENNE+ RYKARL AQGFSQRPGIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IY+KIP
Subjt: FGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIP
Query: EGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
EGFK+P++ N+ R + SIKLQRSLYGLKQSG
Subjt: EGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1U9WYB0 Pol | 5.1e-166 | 62.47 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GI +EHPVA+VHTQNGLAES IK LQLIARPLLMR+KLP S WGHAILHAA+L EPNISHLRIFGCAVYVPI PPQR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
K+ PQRRLGIYV +ESPSII+Y EPL GD+FTARFADCHF+E++ TLGG + + EI W +S L+ LD RTK+CELEVQ+IIHLQ +ANQ+PDAF D+
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
Query: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNN--EISINYTMTGKRWNRINVV
K+VTKS+IPA NAP +I++P Q+ + NES R K+ + + E+N E SIN+ + K WNR ++
Subjt: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNN--EISINYTMTGKRWNRINVV
Query: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
+DNIFAYN+A +I+ E+ED+EP+SVDECR R DWPKWK+AIQ+EL+SL KR+VFGPVV TP+GVKPVG+KWVFVRKRNE NE+ RYKARL AQGFSQRPG
Subjt: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
Query: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
DY+ETYSPVVDAIT RYL+S AV E LDM LMDVVT YLYG+LEN+IYI+IPEGF +PE+ SN + + SIKLQRSLYGLKQSG
Subjt: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| A0A1U9WYD5 Pol | 1.1e-163 | 61.86 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GI +EHPVA+VHTQNGLAES IK LQLIARPLLMR+KLP S WGHAILHAA+L EPNISHLRIFGCAVYVPI P QR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
K+G QRRLGIYV +ESPSII+Y EPL GD+FTARFADCHF+E++ TLGG + + EI W +S L+ LD RTK+CELEVQ+IIHLQ +ANQ+PDAF D+
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
Query: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNNEI--SINYTMTGKRWNRINVV
K+VTKS+IPA NAP +I++P +Q+ + NES R K+ + + E+N I SIN+ + K WNR ++
Subjt: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNNEI--SINYTMTGKRWNRINVV
Query: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
+DNIFAYN+A +I+ E+ED+EP+SVDECR R DWPKWK+AIQ+EL+SL KR+VFGPVV TP+GVKPVG+KWVFVRKRNE NE+ RYKARL AQGFSQRP
Subjt: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
Query: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
DY+ETYSPVVDAIT RYL+S AV E LDM LMDVVT YLYG+LEN+IY++IPEGF +PE+ SN + + SIKLQRSLYGLKQSG
Subjt: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| A0A1U9WYE0 Pol | 8.1e-164 | 61.86 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GI +EHPVA+VHTQNGLAES IK LQLIARPLLMR+KLP S WGHAILHAA+L EPNISHLRIFGCAVYVPI PPQR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
K+G QRRLGIYV +ESPSII+Y EPL GD+FTARFADCHF+E++ STLGG + + EI W +S L+ LD RTK+CELEVQ+IIHLQ +ANQ+PDAF D+
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
Query: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNNEI--SINYTMTGKRWNRINVV
K+VTKS+IPA NAP +I++P +Q+ + NES R K+ + + E+N I SIN+ + K WNR ++
Subjt: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ----------------------------------ETQVYEDNNEI--SINYTMTGKRWNRINVV
Query: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
+DNIFAYN+A +I+ E+ED+E +SVDECR R DWPKWK+AIQ+EL+SL KR+VFGPVV TP+GVKPVG+KWVFVRKRNE NE+ RYKARL AQGFSQRPG
Subjt: VDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPG
Query: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
DY+ETYSPVVDAIT RYL+S AV E LDM LMDVVT YLYG+LEN+IY++I EGF +PE+ SN + + SIKLQ+SLYGLKQSG
Subjt: IDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| A5B4M9 Uncharacterized protein | 1.2e-167 | 63.11 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MS GINIEHPVAH HTQNGLAESFIK LQLIARPLLM+ KLP S WGHAI+H A+L +PNI HLRIFGCAVYVPI P Q
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
KMGPQRRLG+YV F+SPSII Y EPL GDVFTARFADCHFNE+ G K + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ NQ+PDAF
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGIKKL---ENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFT
Query: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK-------------------------------------QETQVYEDNNEISINYTMTGKRWNRI
DTKKVTKS+IPAAN P+RI++P Q+ NES +R K +E QV E N EIS++Y TG++W+R
Subjt: DTKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQK-------------------------------------QETQVYEDNNEISINYTMTGKRWNRI
Query: NVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQ
N+V++NIFA+ VA +II +ED EP++V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KWVFVRKRNENNE+ RYKARL AQGFSQ
Subjt: NVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQ
Query: RPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
RPGIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IY+KIPEGFK+P++ N+ R + SIKLQRSLYGLKQSG
Subjt: RPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| Q949J4 Putative copia-like polyprotein | 1.9e-168 | 64.01 | Show/hide |
Query: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
MSTGI +EHPVAHVHTQNGLAES IK LQLIARPLLMR KL +S+WGHAILHAA+L EPNISHLR+FGCAVYVPI PPQR
Subjt: MSTGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL--------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNET-NSTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
KMGPQRRLGIYV +ESPSII+Y EP+ GD+F RFADCHF+E+ TLGG K L EI WN S LSHLDPRT QCE EVQ+II+LQ++ANQ+PDAFT+
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNET-NSTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDT
Query: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ-------------------------------ETQVY---------EDNNEISINYTMTGKRWNR
++TKSYIPA NAP R++IPT Q+ NES K+ ETQV NNEIS+NY T K WNR
Subjt: KKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQ-------------------------------ETQVY---------EDNNEISINYTMTGKRWNR
Query: INVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFS
NVV+DNIFAYNVA I+ ++ED EPKSV ECR R DWPKWK+AIQAEL SL KRE FGP++ TP+G+KPVG+KW+FVRKRNE EV RYKARL AQGFS
Subjt: INVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFS
Query: QRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
QRPGIDY ETYSPVVDAIT RYLI+LAV E L+M LMDVVT YLYGSL++ I++KIPE FK+PE+Y +SRE CSIKLQ+SLYGLKQSG
Subjt: QRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.4e-32 | 27.59 | Show/hide |
Query: GINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL-----------------------EPNISHLRIFGCAVYVPIFPPQRA
GI+ V H NG++E I+ + AR ++ AKL S WG A+L A L +P + HLR+FG VYV I ++
Subjt: GINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL-----------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGI----------KKLENEIAWNVS---LLSHLDPRTKQCELEVQKIIHLQS
K + I+V +E P+ + + + AR D +ETN + K+ EN+ N S + + +K+C+ +Q + S
Subjt: KMGPQRRLGIYVEFESPSIIRYREPLMGDVFTARFADCHFNETNSTLGGGI----------KKLENEIAWNVS---LLSHLDPRTKQCELEVQKIIHLQS
Query: VANQMPDAFTDTKKVTKSYIP-AANAPSRIEIPTQQVDT----INESTLRQK----------------QETQVYEDNNEISINYTMTGKRWNRINVVVDN
++ + D++K+ ++ P + I+ ++ +NES R++ +E++ E EI I+ IN +
Subjt: VANQMPDAFTDTKKVTKSYIP-AANAPSRIEIPTQQVDT----INESTLRQK----------------QETQVYEDNNEISINYTMTGKRWNRINVVVDN
Query: I-----FAYNVAHNII-------HENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLF
+ +YN N + H + P S DE + R D W+EAI ELN+ + + P+ V +WVF K NE RYKARL
Subjt: I-----FAYNVAHNII-------HENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLF
Query: AQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
A+GF+Q+ IDYEET++PV + R+++SL + NL +H MDV T +L G+L+ EIY+++P+G + NS +C KL +++YGLKQ+
Subjt: AQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-34 | 27.49 | Show/hide |
Query: STGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL---------------------EPNISHLRIFGCAVYVPIFPPQRA
S GI E V NG+AE + + R +L AKLP S WG A+ A L E + SHL++FGC + + QR
Subjt: STGINIEHPVAHVHTQNGLAESFIKHLQLIARPLLMRAKLPLSIWGHAILHAASL---------------------EPNISHLRIFGCAVYVPIFPPQRA
Query: KMGPQRRLGIYVEFESPSI-IRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTD
K+ + I++ + R +P+ V +R D F E+ T +K++N I + + + S +N A +
Subjt: KMGPQRRLGIYVEFESPSI-IRYREPLMGDVFTARFADCHFNETN-STLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTD
Query: TKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQETQVYEDNNEI--SINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKD
T +V++ P + +Q + ++E + TQ E + + S + +R+ V+ ++D EP+S+ E + +
Subjt: TKKVTKSYIPAANAPSRIEIPTQQVDTINESTLRQKQETQVYEDNNEI--SINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKD
Query: WPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLM
+ +A+Q E+ SL K + +V PKG +P+ KWVF K++ + ++ RYKARL +GF Q+ GID++E +SPVV ++R ++SLA +L++ +
Subjt: WPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLM
Query: DVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
DV T +L+G LE EIY++ PEGF++ +C KL +SLYGLKQ+
Subjt: DVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 9.1e-11 | 41.75 | Show/hide |
Query: EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLI
EPKSV KD P W +A+Q EL++L++ + + +V P +G KWVF K + + + R KARL A+GF Q GI + ETYSPVV T+R ++
Subjt: EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLI
Query: SLA
++A
Subjt: SLA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-23 | 32.38 | Show/hide |
Query: QVYEDNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFV
Q+ +NN+ +N G R + ++ N Y++A ++ E+ EP++ + KD +W+ A+ +E+N+ + V P V VG +W+F
Subjt: QVYEDNNEISINYTMTGKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFV
Query: RKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKL
+K N + + RYKARL A+G++QRPG+DY ET+SPV+ + ++R ++ +AV + + +DV +L G+L +++Y+ P GF + N +C KL
Subjt: RKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKL
Query: QRSLYGLKQS
+++LYGLKQ+
Subjt: QRSLYGLKQS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.9e-23 | 34.9 | Show/hide |
Query: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
+W++A+ +E+N+ + V P V VG +W+F +K N + + RYKARL A+G++QRPG+DY ET+SPV+ + ++R ++ +AV + + +DV
Subjt: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLFAQGFSQRPGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
Query: VTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
+L G+L +E+Y+ P GF R +L++++YGLKQ+
Subjt: VTTYLYGSLENEIYIKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQS
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