CuGenDBv2

Gene ID	Pay0017855
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription termination factor MTERF5
Genome location	chr10:4978547..4979060
RNA-Seq Expression	Pay0017855
Synteny	Pay0017855
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034097.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]

3.6e-71

85.96

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKIN +               ++ +  GCSEEKLRDVADFCFNTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPN+MDIYRGNVTTGTKSVL
Subjt:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

XP_008445932.1 PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo]

6.1e-55

72.83

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVK VKELGIEPK+  FV A++IR S+SDS WKKKIN +              +K+ N   CSEEKLRDV DFC NTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL++IPN+MDIYRGNV T TKSVL
Subjt:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

XP_011655506.2 transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus]

1.8e-54

69.19

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDR IQVV+ VKELGIEPK+ +F+ AL++R S+SDSNWKKKIN L               ++ +   CSEEK+RDVADFCFNTAKLDPETVISYPT+
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDKLRPRYKVLEVLKVKSLLKNIKI-PRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDKLR RYKVLE LKVKSLLKN+KI PR LV  ER+F+E YVVKHL++IPN+MDIYRGNV   TKSVL
Subjt:  FMSALDKLRPRYKVLEVLKVKSLLKNIKI-PRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

XP_016900229.1 PREDICTED: uncharacterized protein LOC103489536 [Cucumis melo]

3.6e-71

85.96

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKIN +               ++ +  GCSEEKLRDVADFCFNTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPN+MDIYRGNVTTGTKSVL
Subjt:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

XP_031741173.1 uncharacterized protein LOC101219984 [Cucumis sativus]

8.3e-52

66.28

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Query:  QKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTLF
        QKVDR+IQVV+ VKELGIEPK+ +F+RAL++  S+SDS WKKKIN +               ++ +  GCSEEK+RDVADFC NTAKLDPETV+SYP LF
Subjt:  QKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTLF

Query:  MSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNV--TTGTKSVL
        MSALDKLRPRYKV+EVLKVK+LLKN KI  +L+  EREFVEKY+VKHL+EIPN+MDIYRGNV     TKSV+
Subjt:  MSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNV--TTGTKSVL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BEP9 uncharacterized protein LOC103488811

3.0e-55

72.83

Show/hide

Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVK VKELGIEPK+  FV A++IR S+SDS WKKKIN +              +K+ N   CSEEKLRDV DFC NTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL++IPN+MDIYRGNV T TKSVL
Subjt:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

A0A1S4DW67 uncharacterized protein LOC103489536

1.7e-71

85.96

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKIN +               ++ +  GCSEEKLRDVADFCFNTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPN+MDIYRGNVTTGTKSVL
Subjt:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

A0A5A7SXE1 Transcription termination factor MTERF5

2.0e-51

65.12

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQ+VD+MIQVVK VKELGIEPK+GMFV AL++RCSMS+S+WK+KIN +               R      CSEEK+RDVADFCFNTAKLDP T+ISYP L
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDK-LRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        F  + DK ++PRYKVLEVLKVKSLL+N+KI R+L  GEREFV+ YVVK+L++IPN+MDIYRGN+   TKSVL
Subjt:  FMSALDK-LRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

A0A5A7SXV5 Transcription termination factor MTERF5

1.7e-71

85.96

Show/hide

Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKIN +               ++ +  GCSEEKLRDVADFCFNTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL---------------RKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPN+MDIYRGNVTTGTKSVL
Subjt:  FMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

A0A5D3CWR8 Transcription termination factor MTERF5

3.0e-55

72.83

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL
        MQKVDRMIQVVK VKELGIEPK+  FV A++IR S+SDS WKKKIN +              +K+ N   CSEEKLRDV DFC NTAKLDPETVISYPTL
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHL--------------RKNQN-TGCSEEKLRDVADFCFNTAKLDPETVISYPTL

Query:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL
        FMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL++IPN+MDIYRGNV T TKSVL
Subjt:  FMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G46950.1 Mitochondrial transcription termination factor family protein

8.1e-05

Show/hide

Query:  TGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLL--KNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIY-RGNVT
        T  S E LR   +          E V+  PT+   +L+K + PR  V++ L  K L+  +N  I  +LV  ++EF+++YV+KH   +P +M I+ RG V+
Subjt:  TGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLL--KNIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIY-RGNVT

AT5G07900.1 Mitochondrial transcription termination factor family protein

8.6e-07

26.22

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Query:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSD-SNWKKKINHLRK------------NQNTGC---SEEKLRDVADFCFNTAKLDPETVISYP-
        MQK      + K  +E+G  P+   FV A+       + S W K     ++             ++  C   SE K+    ++  N   + P ++   P 
Subjt:  MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSD-SNWKKKINHLRK------------NQNTGC---SEEKLRDVADFCFNTAKLDPETVISYP-

Query:  TLFMSALDKLRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRG
         LF S   ++ PR  V +VL    L+K +  +  +LV  E+ F+EK V+K+  E+P +M++Y G
Subjt:  TLFMSALDKLRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRG

Sequences

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CDS sequence

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ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGGTATGTTTGTTCGTGCACTTAAAATAAGGTGTTCAATGAG
TGATTCAAATTGGAAGAAGAAAATAAATCATTTAAGAAAGAACCAAAATACTGGTTGTTCGGAGGAGAAACTGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGT
TGGATCCAGAAACTGTAATTTCTTACCCTACGTTATTCATGAGTGCACTGGACAAACTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAGTCTTCTTAAG
AACATTAAGATCCCTCGGATGCTTGTAGGAGGGGAGAGAGAATTTGTGGAGAAATATGTTGTTAAACATTTGAATGAGATCCCAAATATGATGGACATATACCGGGGCAA
TGTCACAACCGGAACCAAATCTGTTCTATAG

mRNA sequence

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Protein sequence

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MQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINHLRKNQNTGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLK
NIKIPRMLVGGEREFVEKYVVKHLNEIPNMMDIYRGNVTTGTKSVL

Pay0017855 (gene) of Melon (Payzawat) v1 genome