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Pay0017954 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0017954
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr01:25125880..25126621
RNA-Seq ExpressionPay0017954
SyntenyPay0017954
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-8174.49Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------
        MTVAEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRVEKSLNERKRERE SKN+RTFS SMHRNR          
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------

Query:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
         +VSSRG+FKSQY+GSSFSKSRSGGGAQR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC Q  HYRRDCP      NT  KTTSQTV QQ RTT 
Subjt:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKG +GRSRQEGKVFAMTQQEAADAPN+VTGT SIFN
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-7668.83Show/hide
Query:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MTV EYEK                  +CKRF+EGLR+EIRTPV A A WNDF KLV AALRVEKSLNERK ERE SKNVRTFS S+HRNR          
Subjt:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VS++GNFKSQ++GSSFSKSRSGGG  R SGSSHP+ S GGSH+ARSDR +LESGKSSVCYNCGQP HYRRDCP     GNT  KT SQT+SQQ +TTR
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKGP+G S QEGKV AM QQEAADAPNVVT TLSIF+
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]4.7e-8578.33Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MT+AEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV AALRVEKSLNERK+ERETSKNV TFS SMHRNRQ         
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VSSRGNFKSQYNGSSFSKS S GGAQR SGSSHPISSTGGSHIARSDRVV ES KSSVCYNCGQP HYRRDCP     GNT  KTTSQTVSQQPR T 
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVT
        TS EGSS GKQKGP+GRSRQEGKVFAMTQQEAADAPNVVT
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVT

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.4e-8174.49Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------
        MTVAEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRVEKSLNERKRERE SKN+RTFS SMHRNR          
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------

Query:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
         +VSSRG+FKSQY+GSSFSKSRSGGGAQR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC Q  HYRRDCP      NT  KTTSQTV QQ RTT 
Subjt:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKG +GRSRQEGKVFAMTQQEAADAPN+VTGT SIFN
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

TYK26763.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-7668.83Show/hide
Query:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MTV EYEK                  +CKRF+EGLR+EIRTPV A A WNDF KLV AALRVEKSLNERK ERE SKNVRTFS S+HRNR          
Subjt:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VS++GNFKSQ++GSSFSKSRSGGG  R SGSSHP+ S GGSH+ARSDR +LESGKSSVCYNCGQP HYRRDCP     GNT  KT SQT+SQQ +TTR
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKGP+G S QEGKV AM QQEAADAPNVVT TLSIF+
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase6.9e-8274.49Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------
        MTVAEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRVEKSLNERKRERE SKN+RTFS SMHRNR          
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------

Query:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
         +VSSRG+FKSQY+GSSFSKSRSGGGAQR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC Q  HYRRDCP      NT  KTTSQTV QQ RTT 
Subjt:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKG +GRSRQEGKVFAMTQQEAADAPN+VTGT SIFN
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

A0A5A7TG44 DNA/RNA polymerases superfamily protein5.1e-7768.83Show/hide
Query:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MTV EYEK                  +CKRF+EGLR+EIRTPV A A WNDF KLV AALRVEKSLNERK ERE SKNVRTFS S+HRNR          
Subjt:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VS++GNFKSQ++GSSFSKSRSGGG  R SGSSHP+ S GGSH+ARSDR +LESGKSSVCYNCGQP HYRRDCP     GNT  KT SQT+SQQ +TTR
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKGP+G S QEGKV AM QQEAADAPNVVT TLSIF+
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

A0A5A7UZM6 Gag protease polyprotein-like protein2.3e-8578.33Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MT+AEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV AALRVEKSLNERK+ERETSKNV TFS SMHRNRQ         
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VSSRGNFKSQYNGSSFSKS S GGAQR SGSSHPISSTGGSHIARSDRVV ES KSSVCYNCGQP HYRRDCP     GNT  KTTSQTVSQQPR T 
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVT
        TS EGSS GKQKGP+GRSRQEGKVFAMTQQEAADAPNVVT
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVT

A0A5D3BB91 Reverse transcriptase6.9e-8274.49Show/hide
Query:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------
        MTVAEYEKK                 +CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRVEKSLNERKRERE SKN+RTFS SMHRNR          
Subjt:  MTVAEYEKKMK--------------WKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNR----------

Query:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
         +VSSRG+FKSQY+GSSFSKSRSGGGAQR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC Q  HYRRDCP      NT  KTTSQTV QQ RTT 
Subjt:  -QVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKG +GRSRQEGKVFAMTQQEAADAPN+VTGT SIFN
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

A0A5D3DT34 DNA/RNA polymerases superfamily protein5.1e-7768.83Show/hide
Query:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------
        MTV EYEK                  +CKRF+EGLR+EIRTPV A A WNDF KLV AALRVEKSLNERK ERE SKNVRTFS S+HRNR          
Subjt:  MTVAEYEKKM--------------KWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQ---------

Query:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR
          VS++GNFKSQ++GSSFSKSRSGGG  R SGSSHP+ S GGSH+ARSDR +LESGKSSVCYNCGQP HYRRDCP     GNT  KT SQT+SQQ +TTR
Subjt:  --VSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSHPISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTR

Query:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN
        TS EGSS GKQKGP+G S QEGKV AM QQEAADAPNVVT TLSIF+
Subjt:  TSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSIFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTTGCAGAATATGAGAAGAAGATGAAGTGGAAATGTAAGAGATTCGAAGAAGGGTTACGAGAGGAAATTCGTACTCCTGTGACAGCTTGTGCAGACTGGAATGA
TTTCTCTAAGTTAGTGAACGCAGCACTAAGGGTAGAAAAAAGTTTAAATGAAAGGAAGCGGGAAAGAGAAACTTCCAAGAATGTACGTACATTCAGCTTATCGATGCATC
GAAATCGACAAGTGTCTAGTAGGGGGAATTTTAAGTCTCAGTACAATGGTTCTTCTTTCTCTAAATCGAGATCAGGCGGAGGAGCTCAGAGATGGAGTGGTTCTAGTCAT
CCTATATCTTCTACAGGAGGTTCTCATATTGCTCGATCAGATAGGGTTGTATTAGAATCTGGCAAGAGTAGTGTATGTTATAACTGCGGTCAGCCAGAACATTATCGTAG
AGACTGTCCCACATCTGATACCAGGGGTAATACATCTGGGAAAACCACTTCTCAGACAGTAAGCCAGCAGCCAAGAACCACGAGAACTAGTAGTGAAGGCTCTAGTAGGG
GAAAACAGAAAGGACCATTGGGTCGCTCTCGTCAGGAAGGGAAGGTTTTTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACGTTGTGACCGGTACGTTATCCATA
TTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTTGCAGAATATGAGAAGAAGATGAAGTGGAAATGTAAGAGATTCGAAGAAGGGTTACGAGAGGAAATTCGTACTCCTGTGACAGCTTGTGCAGACTGGAATGA
TTTCTCTAAGTTAGTGAACGCAGCACTAAGGGTAGAAAAAAGTTTAAATGAAAGGAAGCGGGAAAGAGAAACTTCCAAGAATGTACGTACATTCAGCTTATCGATGCATC
GAAATCGACAAGTGTCTAGTAGGGGGAATTTTAAGTCTCAGTACAATGGTTCTTCTTTCTCTAAATCGAGATCAGGCGGAGGAGCTCAGAGATGGAGTGGTTCTAGTCAT
CCTATATCTTCTACAGGAGGTTCTCATATTGCTCGATCAGATAGGGTTGTATTAGAATCTGGCAAGAGTAGTGTATGTTATAACTGCGGTCAGCCAGAACATTATCGTAG
AGACTGTCCCACATCTGATACCAGGGGTAATACATCTGGGAAAACCACTTCTCAGACAGTAAGCCAGCAGCCAAGAACCACGAGAACTAGTAGTGAAGGCTCTAGTAGGG
GAAAACAGAAAGGACCATTGGGTCGCTCTCGTCAGGAAGGGAAGGTTTTTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACGTTGTGACCGGTACGTTATCCATA
TTTAATTAA
Protein sequenceShow/hide protein sequence
MTVAEYEKKMKWKCKRFEEGLREEIRTPVTACADWNDFSKLVNAALRVEKSLNERKRERETSKNVRTFSLSMHRNRQVSSRGNFKSQYNGSSFSKSRSGGGAQRWSGSSH
PISSTGGSHIARSDRVVLESGKSSVCYNCGQPEHYRRDCPTSDTRGNTSGKTTSQTVSQQPRTTRTSSEGSSRGKQKGPLGRSRQEGKVFAMTQQEAADAPNVVTGTLSI
FN