; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018031 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018031
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionSplicing factor U2af small subunit B-like
Genome locationchr01:18537125..18538457
RNA-Seq ExpressionPay0018031
SyntenyPay0018031
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583606.1 Splicing factor U2af small subunit A, partial [Cucurbita argyrosperma subsp. sororia]3.8e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

XP_008461981.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo]1.3e-93100Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

XP_022970323.1 splicing factor U2af small subunit B-like [Cucurbita maxima]3.8e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

XP_023519661.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]3.8e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

XP_038894442.1 splicing factor U2af small subunit B-like [Benincasa hispida]1.3e-93100Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

TrEMBL top hitse value%identityAlignment
A0A0A0LVA4 Uncharacterized protein2.4e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR IQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

A0A1S3CFU2 splicing factor U2af small subunit B-like6.3e-94100Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

A0A5D3CV58 Splicing factor U2af small subunit B-like6.3e-94100Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

A0A6J1HM65 splicing factor U2af small subunit B-like1.8e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

A0A6J1I2J7 splicing factor U2af small subunit B-like1.8e-9399.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit1.5e-5558.43Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQEL-NKYGEIESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   +   D     +   ++Q+H++EF+E++F E+  KYGE+E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQEL-NKYGEIESLN

Query:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        VCDNL DH+VGNVYV+FR EE A  A+ +L+ R++ G+PI  + SPVTDFREA CRQYE   C RG
Subjt:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

Q6AUG0 Splicing factor U2af small subunit B1.1e-8281.21Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITPGVDAQG PIDP K+Q+HFE+FYED+++EL+K+GE+E+LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYVQFREEEQA  A   L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

Q9FMY5 Splicing factor U2af small subunit B5.2e-8585.45Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP KIQDHFE+FYED+F+ELNK+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

Q9S709 Splicing factor U2af small subunit A3.6e-8686.67Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

Q9ZQW8 Splicing factor U2af small subunit A1.5e-8485.45Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITPG+DAQGNPIDP KIQ  FE+FYED+F+EL+KYGEIESL+V
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDN ADHM+GNVYVQFREE+QAA AL+ L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.0e-3141.88Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P  IT   D +G      + +  +EEFYED+  E  KYGE+ +  VC N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHM

Query:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRG
         GNVYV +R  E A  A ++++GR++AG+ +  +F  ++ ++ A C +Y ++    C+RG
Subjt:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRG

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative2.5e-8786.67Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative4.0e-5683.48Show/hide
Query:  MYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR
        MYQRPDMITPGVDAQG P+DPRKIQ+HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFR
Subjt:  MYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR

Query:  EATCRQYEENMCNRG
        EATCRQYEEN CNRG
Subjt:  EATCRQYEENMCNRG

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.7e-8685.45Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP KIQDHFE+FYED+F+ELNK+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein3.7e-8685.45Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP KIQDHFE+FYED+F+ELNK+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRG
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCATTTGGCATCCATATTCGGAACGGAGAAGGACAGAGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGCCACGGTGATAGGTGTTCACGG
TTGCACACCAAGCCCAGTATAAGCCCCACCCTCTTGCTTTCCAATATGTATCAGAGACCTGACATGATTACTCCTGGTGTCGACGCCCAAGGGAATCCAATTGAC
CCCCGCAAGATCCAGGACCATTTTGAGGAGTTCTATGAAGATCTATTTCAGGAACTGAACAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCT
GACCATATGGTGGGCAATGTTTATGTTCAATTTCGAGAGGAGGAGCAAGCCGCAAATGCTCTTCGGAATCTTAGTGGGAGATTCTATGCTGGACGCCCGATCATT
GTCGACTTCTCTCCAGTTACAGACTTTAGAGAAGCTACATGTAGGCAATATGAAGAAAACATGTGTAATCGCGGAGTGGAGCTTGAGCATGATGCAATGAAGGAC
TCTTTGCGCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCATTTGGCATCCATATTCGGAACGGAGAAGGACAGAGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGCCACGGTGATAGGTGTTCACGG
TTGCACACCAAGCCCAGTATAAGCCCCACCCTCTTGCTTTCCAATATGTATCAGAGACCTGACATGATTACTCCTGGTGTCGACGCCCAAGGGAATCCAATTGAC
CCCCGCAAGATCCAGGACCATTTTGAGGAGTTCTATGAAGATCTATTTCAGGAACTGAACAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCT
GACCATATGGTGGGCAATGTTTATGTTCAATTTCGAGAGGAGGAGCAAGCCGCAAATGCTCTTCGGAATCTTAGTGGGAGATTCTATGCTGGACGCCCGATCATT
GTCGACTTCTCTCCAGTTACAGACTTTAGAGAAGCTACATGTAGGCAATATGAAGAAAACATGTGTAATCGCGGAGTGGAGCTTGAGCATGATGCAATGAAGGAC
TCTTTGCGCATGTAA
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLA
DHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGVELEHDAMKDSLRM