; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018045 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018045
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:16987700..16988209
RNA-Seq ExpressionPay0018045
SyntenyPay0018045
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032505.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]9.8e-7586.16Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MV+KFGLEHARNKRTPA TH K  KDTEGAEV+HKLY+SIVGNLLYLTASRPDIAY VGICARYQADPRITHLE +KRILKYVHG +DFGMMYSYD TPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ
        LV YCDADWAGS + RKSTS GCFFLGNNLISWLSKK+NCVSL TAEA+YIAAGSGCT+
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ

KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.3e-7886.98Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MVKKFGLE ARNKRTP ATHVK TKDTE  E +HKLY+SIVG+LLYLTASRP+IAY VGICA YQADPRITHLEA+KRILKYVHG +DFGMMYSYDTTP 
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        LV YCDADWAGSADDRKSTS GCFFLGNNLISWLSKKQNCVSL T EA+YIAAGSGCTQLIWMKNML E
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.3e-7986.39Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        M KKFGLE ARNKRTPAATHVK T+D +GAEV+HKLY+SIV NLLYLTASRPDIAYAVGICARYQADPRI+HLEA+KRILKYVHG NDFGMMYSYDTTPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        LV YCDADWAG ADDRKSTS GCFFLGNNLI WLSKKQNCVSL T EA+YI AGSGCTQLIWM+N+L E
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

XP_016901849.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]9.8e-7586.16Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MV+KFGLEHARNKRTPA TH K  KDTEGAEV+HKLY+SIVGNLLYLTASRPDIAY VGICARYQADPRITHLE +KRILKYVHG +DFGMMYSYD TPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ
        LV YCDADWAGS + RKSTS GCFFLGNNLISWLSKK+NCVSL TAEA+YIAAGSGCT+
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ

XP_016903683.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like, partial [Cucumis melo]8.1e-6984.97Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MVKKFGLE ARNKRTPAATHVK TKDT+GA+V+ KLY+SIVG+LLYLTASRPDI YA+GICARYQA+P ITHLEA+KRILKYVHG +DFGMMYSYDTT T
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAA
        +V YCDADWAGSADD KSTS GCFFL NNLISWLSKKQNCVSL TAEA+YIAA
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAA

TrEMBL top hitse value%identityAlignment
A0A1S4E0V3 uncharacterized mitochondrial protein AtMg00810-like4.8e-7586.16Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MV+KFGLEHARNKRTPA TH K  KDTEGAEV+HKLY+SIVGNLLYLTASRPDIAY VGICARYQADPRITHLE +KRILKYVHG +DFGMMYSYD TPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ
        LV YCDADWAGS + RKSTS GCFFLGNNLISWLSKK+NCVSL TAEA+YIAAGSGCT+
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ

A0A1S4E626 uncharacterized mitochondrial protein AtMg00810-like3.9e-6984.97Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MVKKFGLE ARNKRTPAATHVK TKDT+GA+V+ KLY+SIVG+LLYLTASRPDI YA+GICARYQA+P ITHLEA+KRILKYVHG +DFGMMYSYDTT T
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAA
        +V YCDADWAGSADD KSTS GCFFL NNLISWLSKKQNCVSL TAEA+YIAA
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAA

A0A5A7STG3 Putative gag-pol polyprotein4.8e-7586.16Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MV+KFGLEHARNKRTPA TH K  KDTEGAEV+HKLY+SIVGNLLYLTASRPDIAY VGICARYQADPRITHLE +KRILKYVHG +DFGMMYSYD TPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ
        LV YCDADWAGS + RKSTS GCFFLGNNLISWLSKK+NCVSL TAEA+YIAAGSGCT+
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQ

A0A5D3DI97 Gag-pol polyprotein6.4e-8086.39Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        M KKFGLE ARNKRTPAATHVK T+D +GAEV+HKLY+SIV NLLYLTASRPDIAYAVGICARYQADPRI+HLEA+KRILKYVHG NDFGMMYSYDTTPT
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        LV YCDADWAG ADDRKSTS GCFFLGNNLI WLSKKQNCVSL T EA+YI AGSGCTQLIWM+N+L E
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

A0A5D3DLL1 Gag-pol polyprotein1.6e-7886.98Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        MVKKFGLE ARNKRTP ATHVK TKDTE  E +HKLY+SIVG+LLYLTASRP+IAY VGICA YQADPRITHLEA+KRILKYVHG +DFGMMYSYDTTP 
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        LV YCDADWAGSADDRKSTS GCFFLGNNLISWLSKKQNCVSL T EA+YIAAGSGCTQLIWMKNML E
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1613.1e-2339.84Show/hide
Query:  YKSIVGNLLYL-TASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLS
        Y S VG ++YL   +RPD+A AVG+ +++ +DP  TH +A+KR+L+Y+     +G+ ++   T  LV Y DADWAG  + R+STS   F L    +SW S
Subjt:  YKSIVGNLLYL-TASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLS

Query:  KKQNCVSLYTAEAKYIAAGSGCTQLIWM
        KKQ  V+L + E +Y+A      + +W+
Subjt:  KKQNCVSLYTAEAKYIAAGSGCTQLIWM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-2638.64Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHK------LYKSIVGNLLY-LTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMY
        ++++F +++A+   TP A H+K +K      V  K       Y S VG+L+Y +  +RPDIA+AVG+ +R+  +P   H EA+K IL+Y+ G     + +
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHK------LYKSIVGNLLY-LTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMY

Query:  SYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
           + P L  Y DAD AG  D+RKS++   F      ISW SK Q CV+L T EA+YIAA     ++IW+K  L E
Subjt:  SYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

P92519 Uncharacterized mitochondrial protein AtMg008105.9e-2239.68Show/hide
Query:  YKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSK
        ++SIVG L YLT +RPDI+YAV I  +   +P +   + +KR+L+YV G    G+    ++   +  +CD+DWAG    R+ST+  C FLG N+ISW +K
Subjt:  YKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSK

Query:  KQNCVSLYTAEAKYIAAGSGCTQLIW
        +Q  VS  + E +Y A      +L W
Subjt:  KQNCVSLYTAEAKYIAAGSGCTQLIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.6e-2238.06Show/hide
Query:  TPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSAD
        +P  +    TK T+  E     Y+ IVG+L YL  +RPDI+YAV   +++   P   HL+A+KRIL+Y+ G  + G+      T +L  Y DADWAG  D
Subjt:  TPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSAD

Query:  DRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        D  ST+    +LG++ ISW SKKQ  V   + EA+Y +  +  +++ W+ ++L E
Subjt:  DRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.1e-2338.12Show/hide
Query:  ARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADW
        A+   TP AT  K T  +     +   Y+ IVG+L YL  +RPD++YAV   ++Y   P   H  A+KR+L+Y+ G  D G+      T +L  Y DADW
Subjt:  ARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADW

Query:  AGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        AG  DD  ST+    +LG++ ISW SKKQ  V   + EA+Y +  +  ++L W+ ++L E
Subjt:  AGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.2e-2333.14Show/hide
Query:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT
        ++ + GL   +    P    V  +  + G  V+ K Y+ ++G L+YL  +R DI++AV   +++   PR+ H +A+ +IL Y+ G    G+ YS      
Subjt:  MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPT

Query:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE
        L  + DA +    D R+ST+  C FLG +LISW SKKQ  VS  +AEA+Y A      +++W+     E
Subjt:  LVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.9e-1031.19Show/hide
Query:  LYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGC-----FFLG----NNLISWLS
        +YLT +RPD+ +AV   +++ +  R   ++A+ ++L YV G    G+ YS  +   L  + D+DWA   D R+S +  C     +FLG    + L   L 
Subjt:  LYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGC-----FFLG----NNLISWLS

Query:  KKQNCVSLY
        ++QN  +L+
Subjt:  KKQNCVSLY

ATMG00810.1 DNA/RNA polymerases superfamily protein4.2e-2339.68Show/hide
Query:  YKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSK
        ++SIVG L YLT +RPDI+YAV I  +   +P +   + +KR+L+YV G    G+    ++   +  +CD+DWAG    R+ST+  C FLG N+ISW +K
Subjt:  YKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWAGSADDRKSTSRGCFFLGNNLISWLSK

Query:  KQNCVSLYTAEAKYIAAGSGCTQLIW
        +Q  VS  + E +Y A      +L W
Subjt:  KQNCVSLYTAEAKYIAAGSGCTQLIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAAAGTTTGGTTTGGAACATGCTCGAAATAAGCGGACTCCAGCTGCGACACATGTTAAACGTACAAAAGACACTGAAGGTGCTGAAGTTAATCACAAACTTTA
CAAGAGTATAGTAGGCAACCTATTATACTTAACAGCAAGTCGACCTGACATAGCTTATGCTGTGGGAATATGTGCTCGTTATCAGGCAGATCCTCGCATCACTCACCTAG
AAGCTATTAAACGAATTCTTAAATACGTTCATGGGATCAATGACTTTGGAATGATGTATTCCTATGATACCACTCCCACTCTAGTTAGATATTGTGATGCTGACTGGGCA
GGTTCAGCCGATGATCGTAAAAGTACGTCTAGAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTGTTTCTTTATATACAGCTGA
AGCTAAATATATAGCTGCAGGTAGTGGTTGTACACAATTGATTTGGATGAAAAACATGCTGCTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAAAGTTTGGTTTGGAACATGCTCGAAATAAGCGGACTCCAGCTGCGACACATGTTAAACGTACAAAAGACACTGAAGGTGCTGAAGTTAATCACAAACTTTA
CAAGAGTATAGTAGGCAACCTATTATACTTAACAGCAAGTCGACCTGACATAGCTTATGCTGTGGGAATATGTGCTCGTTATCAGGCAGATCCTCGCATCACTCACCTAG
AAGCTATTAAACGAATTCTTAAATACGTTCATGGGATCAATGACTTTGGAATGATGTATTCCTATGATACCACTCCCACTCTAGTTAGATATTGTGATGCTGACTGGGCA
GGTTCAGCCGATGATCGTAAAAGTACGTCTAGAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTGTTTCTTTATATACAGCTGA
AGCTAAATATATAGCTGCAGGTAGTGGTTGTACACAATTGATTTGGATGAAAAACATGCTGCTTGAATAA
Protein sequenceShow/hide protein sequence
MVKKFGLEHARNKRTPAATHVKRTKDTEGAEVNHKLYKSIVGNLLYLTASRPDIAYAVGICARYQADPRITHLEAIKRILKYVHGINDFGMMYSYDTTPTLVRYCDADWA
GSADDRKSTSRGCFFLGNNLISWLSKKQNCVSLYTAEAKYIAAGSGCTQLIWMKNMLLE