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Pay0018099 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018099
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationchr06:28035530..28035801
RNA-Seq ExpressionPay0018099
SyntenyPay0018099
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]6.9e-17100Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1594.55Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]6.9e-17100Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

XP_022132734.1 polyadenylate-binding protein 3-like isoform X1 [Momordica charantia]1.0e-1594.55Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQE+KEE DSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]6.9e-17100Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein3.3e-17100Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

A0A5A7T2C2 Polyadenylate-binding protein 2-like3.3e-17100Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X14.8e-1694.55Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQE+KEE DSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

A0A6J1HIK8 polyadenylate-binding protein 3-like6.3e-1694.55Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

A0A6J1KVH8 polyadenylate-binding protein 3-like6.3e-1694.55Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEMEEEAAALREMQAKVEKEMGAVQDP G+AVSQESKEE DSRSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

SwissProt top hitse value%identityAlignment
Q7ZXB8 Polyadenylate-binding protein 2-B1.8e-0450.85Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNV
        +K R++EMEEEA  L+E+Q +VEK+M  +  P G+A    +S E K EAD+RS++VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNV

Q93VI4 Polyadenylate-binding protein 11.2e-1172.73Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSRS++VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

Q9DDY9 Polyadenylate-binding protein 2-A1.8e-0450.85Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNV
        +K R++EMEEEA  L+E+Q +VEK+M  +  P G+A    +S E K EAD+RS++VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNV

Q9FJN9 Polyadenylate-binding protein 22.2e-1381.82Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

Q9LX90 Polyadenylate-binding protein 33.0e-1581.82Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-1681.82Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-1681.82Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

AT5G51120.1 polyadenylate-binding protein 18.4e-1372.73Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSRS++VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

AT5G51120.2 polyadenylate-binding protein 11.5e-0641.3Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQ-------------------------------------DPAGSAVSQESKEEADSRSVFVGNV
        MKKR+KE+EEEA ALREMQAK EK+MGA Q                                     +   S VS   KEE DSRS++VGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQ-------------------------------------DPAGSAVSQESKEEADSRSVFVGNV

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-1481.82Show/hide
Query:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCCGTTCAAGATCCTGCTGGTTCG
GCTGTAAGTCAAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCCGTTCAAGATCCTGCTGGTTCG
GCTGTAAGTCAAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTGAGATGA
Protein sequenceShow/hide protein sequence
MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVR