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Pay0018165 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018165
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr10:19640964..19641392
RNA-Seq ExpressionPay0018165
SyntenyPay0018165
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-5278.87Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

KAA0054432.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-5379.43Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  K   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM

KAA0056449.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-62100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREH
        QIKHDTLKYIYNTRMNEGSPVREH
Subjt:  QIKHDTLKYIYNTRMNEGSPVREH

TYK07761.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-5278.87Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

XP_008454857.1 PREDICTED: uncharacterized protein LOC103495164 [Cucumis melo]2.9e-72100Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

TrEMBL top hitse value%identityAlignment
A0A1S3BZI9 uncharacterized protein LOC1034951641.4e-72100Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

A0A5A7SMH8 Gag/pol protein5.6e-5378.87Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

A0A5A7UF91 Gag/pol protein4.3e-5379.43Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  K   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM

A0A5D3CPJ6 Gag/pol protein5.6e-5378.87Show/hide
Query:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE
        MTSATLNMLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQE

Query:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        MF Q  YQIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  MFRQTFYQIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA

A0A5D3E0T2 Gag/pol protein7.8e-63100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREH
        QIKHDTLKYIYNTRMNEGSPVREH
Subjt:  QIKHDTLKYIYNTRMNEGSPVREH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTGCTACCTTGAATATGTTGGCTACTAATAAACTTAATGGTAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAACCATCGATGACCTGCGATT
TGTCCAAGTTGAGAAGTGTCCTCAAGTCCCAATAGCTAATGCAACTCGAACTGTTCGAGAAGCACATGAGTGTCGGTCAAGGCAAATGAAAAATCCTAGCGCATACATTC
TGCCAAGCTTATCTGAAGTATTGACCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATCATGGACTCTTTGCAGGAGATGTTTCGTCAGACCTTTTATCAGATCAAG
CATGATACTCTAAAATACATTTATAATACTCGTATGAACGAGGGATCTCCAGTCCGAGAACATGTTCTTAATATGATGATTTATTTCAACATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTGCTACCTTGAATATGTTGGCTACTAATAAACTTAATGGTAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAACCATCGATGACCTGCGATT
TGTCCAAGTTGAGAAGTGTCCTCAAGTCCCAATAGCTAATGCAACTCGAACTGTTCGAGAAGCACATGAGTGTCGGTCAAGGCAAATGAAAAATCCTAGCGCATACATTC
TGCCAAGCTTATCTGAAGTATTGACCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATCATGGACTCTTTGCAGGAGATGTTTCGTCAGACCTTTTATCAGATCAAG
CATGATACTCTAAAATACATTTATAATACTCGTATGAACGAGGGATCTCCAGTCCGAGAACATGTTCTTAATATGATGATTTATTTCAACATGGCATAA
Protein sequenceShow/hide protein sequence
MTSATLNMLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFYQIK
HDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA