CuGenDBv2

Gene ID	Pay0018218
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribosomal protein L10
Genome location	chr07:1016488..1016973
RNA-Seq Expression	Pay0018218
Synteny	Pay0018218
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0005840 - ribosome (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEN56113.1 hypothetical protein [Cucumis melo subsp. melo]

2.4e-86

100

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

OVA11595.1 hypothetical protein BVC80_967g3 [Macleaya cordata]

2.8e-71

85.98

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFG SLL+RESLLR  +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASD +E   SLFHF+LPSSYL FVCSREEFD   LGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK

QEX95855.1 ribosomal protein L10 [Cercis canadensis]

1.7e-71

85.98

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFG SLL+RESLLR  +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C TGKKK FFAQLAHSAGPT ILYL+EE +DRLEFLPS DS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASD +E   SLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK

YP_004849327.1 ribosomal protein L10 [Cucumis sativus]

1.4e-83

97.55

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSS
        MPFGISLLRRESL RLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG  RTPFRPSSCSTGKKKGFFAQLAHSAGPT ILYLSEEGSDRLEFLPSS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSS

Query:  DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

YP_009913631.1 ribosomal protein L10 [Luffa acutangula]

4.2e-75

90.06

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFG SLL+RESLLR  +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNE   SLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

TrEMBL top hits

e value

%identity

Alignment

A0A3Q9CRZ2 Ribosomal protein L10

1.2e-86

100

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

A0A5A7UY09 Ribosomal protein L10

1.2e-86

100

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

A0A7D5Y0N6 Ribosomal protein L10

2.0e-75

90.06

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFG SLL+RESLLR  +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNE   SLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

G3EIX9 Ribosomal protein L10

7.0e-84

97.55

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSS
        MPFGISLLRRESL RLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG  RTPFRPSSCSTGKKKGFFAQLAHSAGPT ILYLSEEGSDRLEFLPSS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSS

Query:  DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  DSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

G3EU29 Uncharacterized protein ORF2

1.2e-86

100

Show/hide

Query:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
        MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS
Subjt:  MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDS

Query:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
        MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  MDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

SwissProt top hits

e value

%identity

Alignment

P38450 Uncharacterized mitochondrial protein ymf1

7.8e-16

41.73

Show/hide

Query:  EERSPEILISFHSSGSTSKQWRKLKN--PWFPGRTPFRP----SSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRL--EFLPSSDSMDQDLLSLYGQY
        +++ P IL+ FH SG TS+QWR++KN      G+T F+P     +     +  + AQLA SAGPT ILYL++E  +    + LPS+ S  Q+L+ LYGQ 
Subjt:  EERSPEILISFHSSGSTSKQWRKLKN--PWFPGRTPFRP----SSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRL--EFLPSSDSMDQDLLSLYGQY

Query:  RSTLVDHMDVEKASDLNECS--RSLFHF-YLPSSYLSFV
        RST+ +HMD++KA+ L   S  + LF F +LP +   F+
Subjt:  RSTLVDHMDVEKASDLNECS--RSLFHF-YLPSSYLSFV

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCATTCGGAATCAGTCTTCTACGGAGGGAAAGCCTGTTACGATTAATCTTAAGTGGAGAGGAAAGATCTCCAGAGATTCTTATCTCATTCCATTCCAGTGGCTCGAC
CAGTAAGCAATGGCGAAAACTCAAAAATCCATGGTTTCCCGGTAGAACCCCATTTCGCCCAAGTTCTTGCTCAACCGGAAAAAAGAAGGGCTTTTTCGCACAGCTTGCTC
ATAGTGCGGGTCCCACTTTGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGG
CAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTT
CGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYG
QYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK

Pay0018218 (gene) of Melon (Payzawat) v1 genome