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Pay0018246 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018246
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr03:12241038..12241538
RNA-Seq ExpressionPay0018246
SyntenyPay0018246
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036534.1 uncharacterized protein E6C27_scaffold191G00350 [Cucumis melo var. makuwa]2.6e-3767.26Show/hide
Query:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL
        IQ ++M+FDLNRLFCFEGA FKR+KQ+MLFFLTLK++ TAC +++  V  K+P +E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE WDAL
Subjt:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL

Query:  QKKYDIEEAGSKK
        QKKYD EE G KK
Subjt:  QKKYDIEEAGSKK

KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]2.0e-3768.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++  V  K+PT+E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]3.1e-3868.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+FDLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++P V  K+PT+++++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]2.2e-3969.23Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNRLF FEGA FKR+KQ++LFFLTLKK+ATAC T++P V  K+PT+E+++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEAGSKK
Subjt:  WDALQKKYDIEEAGSKK

XP_016903004.1 PREDICTED: uncharacterized protein LOC107992001 [Cucumis melo]1.2e-3765.57Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+ I QG+MM  DLNR   FEGA FK +KQ+M FFL L+K+AT CIT E   PV+NPT+EEI NH  W +S+FICKN+I+NGL +ELYDY  TMS  KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKKTLRIL
        WDALQKKYD E+ GSKKTLRIL
Subjt:  WDALQKKYDIEEAGSKKTLRIL

TrEMBL top hitse value%identityAlignment
A0A1S4E451 uncharacterized protein LOC1079920015.7e-3865.57Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+ I QG+MM  DLNR   FEGA FK +KQ+M FFL L+K+AT CIT E   PV+NPT+EEI NH  W +S+FICKN+I+NGL +ELYDY  TMS  KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKKTLRIL
        WDALQKKYD E+ GSKKTLRIL
Subjt:  WDALQKKYDIEEAGSKKTLRIL

A0A5A7SZ30 Uncharacterized protein1.3e-3767.26Show/hide
Query:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL
        IQ ++M+FDLNRLFCFEGA FKR+KQ+MLFFLTLK++ TAC +++  V  K+P +E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE WDAL
Subjt:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL

Query:  QKKYDIEEAGSKK
        QKKYD EE G KK
Subjt:  QKKYDIEEAGSKK

A0A5A7USR3 Uncharacterized protein1.5e-3868.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+FDLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++P V  K+PT+++++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

A0A5A7UYY4 Uncharacterized protein1.0e-3969.23Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNRLF FEGA FKR+KQ++LFFLTLKK+ATAC T++P V  K+PT+E+++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEAGSKK
Subjt:  WDALQKKYDIEEAGSKK

A0A5D3BEH3 Uncharacterized protein9.8e-3868.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++  V  K+PT+E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTATAATTCAAGGCAACATGATGGCCTTTGATCTCAACCGACTATTTTGCTTCGAAGGAGCATGTTTCAAACGTTTCAAACAAGAAATGTTGTTCTTTCTAAC
CTTGAAAAAGATCGCCACTGCTTGCATTACTAAAGAACCGATAGTTCCAGTAAAAAATCCAACTAAGGAGGAGATCCAAAACCATGCTACATGGATAGAATCAAACTTTA
TATGTAAGAATCTAATTATGAATGGACTTATTAATGAGCTTTATGATTATTACACTACTATGTCCACCGTGAAAGAATTCTGGGATGCATTGCAAAAGAAGTATGACATC
GAAGAGGCCGGATCCAAGAAAACTTTAAGAATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTATAATTCAAGGCAACATGATGGCCTTTGATCTCAACCGACTATTTTGCTTCGAAGGAGCATGTTTCAAACGTTTCAAACAAGAAATGTTGTTCTTTCTAAC
CTTGAAAAAGATCGCCACTGCTTGCATTACTAAAGAACCGATAGTTCCAGTAAAAAATCCAACTAAGGAGGAGATCCAAAACCATGCTACATGGATAGAATCAAACTTTA
TATGTAAGAATCTAATTATGAATGGACTTATTAATGAGCTTTATGATTATTACACTACTATGTCCACCGTGAAAGAATTCTGGGATGCATTGCAAAAGAAGTATGACATC
GAAGAGGCCGGATCCAAGAAAACTTTAAGAATACTCTAA
Protein sequenceShow/hide protein sequence
MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDALQKKYDI
EEAGSKKTLRIL