; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018256 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018256
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:13003498..13005895
RNA-Seq ExpressionPay0018256
SyntenyPay0018256
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051440.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.2e-9344.68Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK-----------------GYHQLRIRDNDIPKTAFHSRYGH
        +VREYP++FPDELP LPP REIDFAIELE GTA ISRAPYR+A AELKELKV LQELL+K                 GYHQLRIRD+DIPKTAF SRYGH
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK-----------------GYHQLRIRDNDIPKTAFHSRYGH

Query:  YEFIVKSFGLTNATAVFMDLMNKV-----------------------------------------------------KKVSFLGHVVFSKGVSVDPTKIK
        YEFIV SFGLTNA AVFMDLMN+V                                                     KKV+FLGHVV S+GVSVDP KI+
Subjt:  YEFIVKSFGLTNATAVFMDLMNKV-----------------------------------------------------KKVSFLGHVVFSKGVSVDPTKIK

Query:  VVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKSIFTMPYGSGSFVIYSDVSKKGLDCVLMQQ--------------------------------
         VT+WPR   VSE+RSFLGLAGYYRR    F       S+  +P GSGSFVIYSD SKKGL CVLMQQ                                
Subjt:  VVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKSIFTMPYGSGSFVIYSDVSKKGLDCVLMQQ--------------------------------

Query:  -----VSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG----------------------------------------------------
             VS+ EVTS LAQLSVQPTLRQ+IIVAQLN PYL++  RLVE G                                                    
Subjt:  -----VSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG----------------------------------------------------

Query:  -----------------------------------------------------------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGE
                                                                               YQA IGMAPFEALYG+C RSPVCWGEVGE
Subjt:  -----------------------------------------------------------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGE

Query:  QRMLGPKLVQTTNAAIQNIRARMLTA
        QRMLG +LVQTTNAAIQ IRARMLTA
Subjt:  QRMLGPKLVQTTNAAIQNIRARMLTA

KAA0067512.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.1e-8873.9Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC
        MDLMNKV K       + F+G ++              SKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR                 RKGTPFI 
Subjt:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC

Query:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQV
        SPACKS             +FTMPYGSGSFVIYSDVSKKGLDCVLMQQV
Subjt:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQV

TYK03544.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.5e-8639.44Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK----------------------------------------
        +V +YP++FPDELP LPP REIDF IELE GTA ISR PYR+A AEL ELKV LQELLDK                                        
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK----------------------------------------

Query:  ---GYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKVKK------------------------------VSFLGHVVFSKGVSVDPT
           GYHQLRI+D+DIPKTAF SRY HYEFIV SFGLTNA  +FMDLMN+V K                              V+FL HVV ++GVS+DP 
Subjt:  ---GYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKVKK------------------------------VSFLGHVVFSKGVSVDPT

Query:  KIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFICSPACKSIF-------------TMPYGSGSFVIYSDVSKKGLDCVLMQ
        KI+ VTSWPRP  +SE+RSFLGLAGYYR                 RKGTPF+ SPAC+S F             TMP GSGSFVIYSD SKKG+ CVL+Q
Subjt:  KIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFICSPACKSIF-------------TMPYGSGSFVIYSDVSKKGLDCVLMQ

Query:  QVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG--------------------------------------------------------
        Q  +V   S   QL +QPTLRQRIIVAQL DPYL++  RLVE G                                                        
Subjt:  QVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG--------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
                          YQA IGMAPFEALYGRC RSPVCWG++GEQR+LGP+LVQTTNAAIQNIRARMLTA
Subjt:  ------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA

TYK22433.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-10552.74Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC
        MDLMNKV K       + F+G ++              SKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR                 RKGTPFI 
Subjt:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC

Query:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQVSI-VEVTSH------LAQLSVQPTLRQRIIVAQLN----------------
        SPACKS             +FTMPYGSGSFVIYSDVSKKGLDCVLMQQV   +++  H      +   + Q +L+      +LN                
Subjt:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQVSI-VEVTSH------LAQLSVQPTLRQRIIVAQLN----------------

Query:  --------------------------DPYLIDNHR-------------LVEA------------------------------------------------
                                  D  L+   R             L EA                                                
Subjt:  --------------------------DPYLIDNHR-------------LVEA------------------------------------------------

Query:  ------------------GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
                           YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
Subjt:  ------------------GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA

XP_016902032.1 PREDICTED: uncharacterized protein LOC107991507 [Cucumis melo]8.9e-15692.56Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKS-------------IFTMPYGSGSFVIYSDVS
        MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFI SPACKS             +FTMPYGSGSFVIYSDVS
Subjt:  MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKS-------------IFTMPYGSGSFVIYSDVS

Query:  KKGLDCVLMQQVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAGYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ
        KKGLDCVLMQQVSIVEVTS LAQLSVQPTLRQRIIVAQLNDPYLID HRLVE GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ
Subjt:  KKGLDCVLMQQVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAGYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ

Query:  NIRARMLTA
        NIRARMLTA
Subjt:  NIRARMLTA

TrEMBL top hitse value%identityAlignment
A0A1S4E1D1 uncharacterized protein LOC1079915074.3e-15692.56Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKS-------------IFTMPYGSGSFVIYSDVS
        MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFI SPACKS             +FTMPYGSGSFVIYSDVS
Subjt:  MDLMNKVKKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKS-------------IFTMPYGSGSFVIYSDVS

Query:  KKGLDCVLMQQVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAGYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ
        KKGLDCVLMQQVSIVEVTS LAQLSVQPTLRQRIIVAQLNDPYLID HRLVE GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ
Subjt:  KKGLDCVLMQQVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAGYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQ

Query:  NIRARMLTA
        NIRARMLTA
Subjt:  NIRARMLTA

A0A5A7U8E6 Ty3-gypsy retrotransposon protein4.0e-9344.68Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK-----------------GYHQLRIRDNDIPKTAFHSRYGH
        +VREYP++FPDELP LPP REIDFAIELE GTA ISRAPYR+A AELKELKV LQELL+K                 GYHQLRIRD+DIPKTAF SRYGH
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK-----------------GYHQLRIRDNDIPKTAFHSRYGH

Query:  YEFIVKSFGLTNATAVFMDLMNKV-----------------------------------------------------KKVSFLGHVVFSKGVSVDPTKIK
        YEFIV SFGLTNA AVFMDLMN+V                                                     KKV+FLGHVV S+GVSVDP KI+
Subjt:  YEFIVKSFGLTNATAVFMDLMNKV-----------------------------------------------------KKVSFLGHVVFSKGVSVDPTKIK

Query:  VVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKSIFTMPYGSGSFVIYSDVSKKGLDCVLMQQ--------------------------------
         VT+WPR   VSE+RSFLGLAGYYRR    F       S+  +P GSGSFVIYSD SKKGL CVLMQQ                                
Subjt:  VVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKSIFTMPYGSGSFVIYSDVSKKGLDCVLMQQ--------------------------------

Query:  -----VSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG----------------------------------------------------
             VS+ EVTS LAQLSVQPTLRQ+IIVAQLN PYL++  RLVE G                                                    
Subjt:  -----VSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG----------------------------------------------------

Query:  -----------------------------------------------------------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGE
                                                                               YQA IGMAPFEALYG+C RSPVCWGEVGE
Subjt:  -----------------------------------------------------------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGE

Query:  QRMLGPKLVQTTNAAIQNIRARMLTA
        QRMLG +LVQTTNAAIQ IRARMLTA
Subjt:  QRMLGPKLVQTTNAAIQNIRARMLTA

A0A5A7VGM5 Ty3-gypsy retrotransposon protein3.0e-8873.9Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC
        MDLMNKV K       + F+G ++              SKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR                 RKGTPFI 
Subjt:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC

Query:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQV
        SPACKS             +FTMPYGSGSFVIYSDVSKKGLDCVLMQQV
Subjt:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQV

A0A5D3BWP3 Retrotransposon protein, putative, Ty3-gypsy subclass7.3e-8739.44Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK----------------------------------------
        +V +YP++FPDELP LPP REIDF IELE GTA ISR PYR+A AEL ELKV LQELLDK                                        
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDK----------------------------------------

Query:  ---GYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKVKK------------------------------VSFLGHVVFSKGVSVDPT
           GYHQLRI+D+DIPKTAF SRY HYEFIV SFGLTNA  +FMDLMN+V K                              V+FL HVV ++GVS+DP 
Subjt:  ---GYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKVKK------------------------------VSFLGHVVFSKGVSVDPT

Query:  KIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFICSPACKSIF-------------TMPYGSGSFVIYSDVSKKGLDCVLMQ
        KI+ VTSWPRP  +SE+RSFLGLAGYYR                 RKGTPF+ SPAC+S F             TMP GSGSFVIYSD SKKG+ CVL+Q
Subjt:  KIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFICSPACKSIF-------------TMPYGSGSFVIYSDVSKKGLDCVLMQ

Query:  QVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG--------------------------------------------------------
        Q  +V   S   QL +QPTLRQRIIVAQL DPYL++  RLVE G                                                        
Subjt:  QVSIVEVTSHLAQLSVQPTLRQRIIVAQLNDPYLIDNHRLVEAG--------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
                          YQA IGMAPFEALYGRC RSPVCWG++GEQR+LGP+LVQTTNAAIQNIRARMLTA
Subjt:  ------------------YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA

A0A5D3DFV7 Ty3-gypsy retrotransposon protein2.0e-10552.74Show/hide
Query:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
        MVREYPNIFPDELPELP SREIDFAIELE GTASISRA YRI LAELKELKV LQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF
Subjt:  MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVF

Query:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC
        MDLMNKV K       + F+G ++              SKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR                 RKGTPFI 
Subjt:  MDLMNKVKK-------VSFLGHVV-------------FSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR-----------------RKGTPFIC

Query:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQVSI-VEVTSH------LAQLSVQPTLRQRIIVAQLN----------------
        SPACKS             +FTMPYGSGSFVIYSDVSKKGLDCVLMQQV   +++  H      +   + Q +L+      +LN                
Subjt:  SPACKS-------------IFTMPYGSGSFVIYSDVSKKGLDCVLMQQVSI-VEVTSH------LAQLSVQPTLRQRIIVAQLN----------------

Query:  --------------------------DPYLIDNHR-------------LVEA------------------------------------------------
                                  D  L+   R             L EA                                                
Subjt:  --------------------------DPYLIDNHR-------------LVEA------------------------------------------------

Query:  ------------------GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
                           YQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA
Subjt:  ------------------GYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.0e-1328.29Show/hide
Query:  LDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV--------------------------------------------------
        L KG+HQ+ +    + KTAF +++GHYE++   FGL NA A F   MN +                                                  
Subjt:  LDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV--------------------------------------------------

Query:  ---KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR
           ++ +FLGHV+   G+  +P KI+ +  +P P K  E+++FLGL GYYR+
Subjt:  ---KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR

P10401 Retrovirus-related Pol polyprotein from transposon gypsy4.1e-1028.48Show/hide
Query:  LAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV------------------------------------
        LA L + K      L  GYHQ+ + ++D  KT+F    G YEF    FGL NA+++F   ++ V                                    
Subjt:  LAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV------------------------------------

Query:  -----------------KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR
                         + V +LG +V   G   DP K+K +  +P P  V +VRSFLGLA YYR
Subjt:  -----------------KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYR

P20825 Retrovirus-related Pol polyprotein from transposon 2973.2e-1530.92Show/hide
Query:  LDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV--------------------------------------------------
        L KG+HQ+ + +  I KTAF ++ GHYE++   FGL NA A F   MN +                                                  
Subjt:  LDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV--------------------------------------------------

Query:  ---KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR
           K+ +FLGH+V   G+  +P K+K + S+P P K  E+R+FLGL GYYR+
Subjt:  ---KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR

P92523 Uncharacterized mitochondrial protein AtMg008601.9e-0746Show/hide
Query:  KVSFLG--HVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR
        ++++LG  H++  +GVS DP K++ +  WP P   +E+R FLGL GYYRR
Subjt:  KVSFLG--HVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.7e-1327.11Show/hide
Query:  LAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV------------------------------------
        LA L   K      L  G+HQ+ ++++DIPKTAF +  G YEF+   FGL NA A+F  +++ +                                    
Subjt:  LAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKV------------------------------------

Query:  -----------------KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR
                          +V FLG++V + G+  DP K++ ++  P P  V E++ FLG+  YYR+
Subjt:  -----------------KKVSFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.3e-0846Show/hide
Query:  KVSFLG--HVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR
        ++++LG  H++  +GVS DP K++ +  WP P   +E+R FLGL GYYRR
Subjt:  KVSFLG--HVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAGAATATCCCAACATTTTTCCTGATGAGCTTCCAGAACTTCCACCTTCTAGGGAGATCGATTTTGCTATCGAGCTGGAGTCAGGCACTGCCTCAATATCAAG
AGCTCCTTATAGAATAGCCCTAGCTGAGTTGAAGGAGTTAAAGGTCCACTTGCAGGAGTTACTGGACAAGGGCTATCACCAACTGAGGATTAGAGACAATGATATTCCTA
AGACTGCTTTTCATTCTAGATATGGACATTACGAGTTCATTGTAAAATCTTTTGGCTTGACCAATGCAACTGCTGTGTTTATGGATCTGATGAACAAGGTGAAGAAGGTG
TCTTTTCTTGGCCACGTAGTATTCAGTAAGGGAGTCTCTGTAGACCCAACGAAAATTAAAGTTGTCACTAGTTGGCCTCGACCATTTAAAGTCAGCGAAGTTCGTAGTTT
TCTAGGTTTAGCAGGTTATTACAGAAGGAAGGGGACTCCTTTTATTTGTAGCCCAGCATGTAAGAGTATCTTTACAATGCCATATGGGTCTGGAAGTTTTGTGATTTACA
GTGACGTCTCCAAGAAAGGACTGGATTGTGTTTTAATGCAGCAAGTTTCGATAGTAGAAGTTACTTCACATTTGGCTCAGTTGTCAGTACAACCGACCTTGAGGCAGAGG
ATTATTGTTGCTCAGCTAAATGATCCATATTTGATTGATAATCATCGGCTTGTAGAAGCAGGTTATCAGGCTAAGATTGGCATGGCACCGTTTGAGGCTCTGTATGGTAG
GTGTTATAGATCTCCTGTATGTTGGGGTGAAGTTGGTGAGCAGAGAATGTTAGGCCCTAAGTTAGTTCAGACTACCAATGCAGCCATACAGAATATCAGAGCTCGTATGT
TGACAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAGAATATCCCAACATTTTTCCTGATGAGCTTCCAGAACTTCCACCTTCTAGGGAGATCGATTTTGCTATCGAGCTGGAGTCAGGCACTGCCTCAATATCAAG
AGCTCCTTATAGAATAGCCCTAGCTGAGTTGAAGGAGTTAAAGGTCCACTTGCAGGAGTTACTGGACAAGGGCTATCACCAACTGAGGATTAGAGACAATGATATTCCTA
AGACTGCTTTTCATTCTAGATATGGACATTACGAGTTCATTGTAAAATCTTTTGGCTTGACCAATGCAACTGCTGTGTTTATGGATCTGATGAACAAGGTGAAGAAGGTG
TCTTTTCTTGGCCACGTAGTATTCAGTAAGGGAGTCTCTGTAGACCCAACGAAAATTAAAGTTGTCACTAGTTGGCCTCGACCATTTAAAGTCAGCGAAGTTCGTAGTTT
TCTAGGTTTAGCAGGTTATTACAGAAGGAAGGGGACTCCTTTTATTTGTAGCCCAGCATGTAAGAGTATCTTTACAATGCCATATGGGTCTGGAAGTTTTGTGATTTACA
GTGACGTCTCCAAGAAAGGACTGGATTGTGTTTTAATGCAGCAAGTTTCGATAGTAGAAGTTACTTCACATTTGGCTCAGTTGTCAGTACAACCGACCTTGAGGCAGAGG
ATTATTGTTGCTCAGCTAAATGATCCATATTTGATTGATAATCATCGGCTTGTAGAAGCAGGTTATCAGGCTAAGATTGGCATGGCACCGTTTGAGGCTCTGTATGGTAG
GTGTTATAGATCTCCTGTATGTTGGGGTGAAGTTGGTGAGCAGAGAATGTTAGGCCCTAAGTTAGTTCAGACTACCAATGCAGCCATACAGAATATCAGAGCTCGTATGT
TGACAGCATAG
Protein sequenceShow/hide protein sequence
MVREYPNIFPDELPELPPSREIDFAIELESGTASISRAPYRIALAELKELKVHLQELLDKGYHQLRIRDNDIPKTAFHSRYGHYEFIVKSFGLTNATAVFMDLMNKVKKV
SFLGHVVFSKGVSVDPTKIKVVTSWPRPFKVSEVRSFLGLAGYYRRKGTPFICSPACKSIFTMPYGSGSFVIYSDVSKKGLDCVLMQQVSIVEVTSHLAQLSVQPTLRQR
IIVAQLNDPYLIDNHRLVEAGYQAKIGMAPFEALYGRCYRSPVCWGEVGEQRMLGPKLVQTTNAAIQNIRARMLTA