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Pay0018284 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018284
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr01:22226056..22226448
RNA-Seq ExpressionPay0018284
SyntenyPay0018284
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047672.1 uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa]4.2e-3366.93Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        MTDNGR+FSNSMIDKLCEKFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV K  RDWQERI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

KAA0059585.1 uncharacterized protein E6C27_scaffold54G00040 [Cucumis melo var. makuwa]3.2e-3366.14Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRL-FTVYRLSFPSKKI
        +TDNGR+FSN+MIDKLCEKFK KQYKS MYNA AN LAEAFNKT+C LLKKIV KSKRDWQERIDEA            G+    L + V  + F  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRL-FTVYRLSFPSKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRM +QEGLTT+DNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

TYK05790.1 uncharacterized protein E5676_scaffold98G002940 [Cucumis melo var. makuwa]7.2e-3366.93Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        +TDNGR+FSNSMIDKLCEKFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV KSKRDWQ+RI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

TYK27554.1 uncharacterized protein E5676_scaffold22G00230 [Cucumis melo var. makuwa]3.2e-3367.72Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        MTDNGR+FSNSMIDKLC KFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV KSKRDWQERI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

XP_008447314.1 PREDICTED: uncharacterized protein LOC103489785 [Cucumis melo]3.2e-65100Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS
        MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS

Query:  SLRMAMQEGLTTEDNVKLRLQELEDLMKSD
        SLRMAMQEGLTTEDNVKLRLQELEDLMKSD
Subjt:  SLRMAMQEGLTTEDNVKLRLQELEDLMKSD

TrEMBL top hitse value%identityAlignment
A0A1S3BHR7 uncharacterized protein LOC1034897851.5e-65100Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS
        MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKIS

Query:  SLRMAMQEGLTTEDNVKLRLQELEDLMKSD
        SLRMAMQEGLTTEDNVKLRLQELEDLMKSD
Subjt:  SLRMAMQEGLTTEDNVKLRLQELEDLMKSD

A0A5A7V172 Uncharacterized protein1.6e-3366.14Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRL-FTVYRLSFPSKKI
        +TDNGR+FSN+MIDKLCEKFK KQYKS MYNA AN LAEAFNKT+C LLKKIV KSKRDWQERIDEA            G+    L + V  + F  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRL-FTVYRLSFPSKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRM +QEGLTT+DNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

A0A5D3C379 Integrase catalytic domain-containing protein3.5e-3366.93Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        +TDNGR+FSNSMIDKLCEKFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV KSKRDWQ+RI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

A0A5D3C8N8 Ribonuclease H2.0e-3366.93Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        MTDNGR+FSNSMIDKLCEKFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV K  RDWQERI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

A0A5D3DVM7 Ribonuclease H1.6e-3367.72Show/hide
Query:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI
        MTDNGR+FSNSMIDKLC KFK KQYKS MYNAAAN LAEAFNKT+C LLKKIV KSKRDWQERI EA            G+    L     +  P  ++I
Subjt:  MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFP-SKKI

Query:  SSLRMAMQEGLTTEDNVKLRLQELEDL
         SLRMA+QEGLTTEDNVKLRLQELE L
Subjt:  SSLRMAMQEGLTTEDNVKLRLQELEDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGATAATGGAAGGAAATTCTCCAATAGCATGATAGATAAATTATGTGAAAAATTCAAGTCCAAGCAATACAAGTCATGTATGTACAACGCAGCTGCGAAT
GAACTAGCAGAAGCATTTAATAAAACGATATGCTATCTTCTAAAGAAAATTGTCTACAAGTCGAAGAGGGATTGGCAAGAAAGAATCGATGAAGCATTTGGGCTT
ATCGAACCACTCATTACACTCCTACAGGGATTACACCATATTCGCTTGTTTACGGTGTATAGGTTGTCCTTCCCCTCGAAAAAAATCTCATCATTAAGAATGGCA
ATGCAAGAGGGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGACTTGATGAAAAGCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGATAATGGAAGGAAATTCTCCAATAGCATGATAGATAAATTATGTGAAAAATTCAAGTCCAAGCAATACAAGTCATGTATGTACAACGCAGCTGCGAAT
GAACTAGCAGAAGCATTTAATAAAACGATATGCTATCTTCTAAAGAAAATTGTCTACAAGTCGAAGAGGGATTGGCAAGAAAGAATCGATGAAGCATTTGGGCTT
ATCGAACCACTCATTACACTCCTACAGGGATTACACCATATTCGCTTGTTTACGGTGTATAGGTTGTCCTTCCCCTCGAAAAAAATCTCATCATTAAGAATGGCA
ATGCAAGAGGGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGACTTGATGAAAAGCGACTAG
Protein sequenceShow/hide protein sequence
MTDNGRKFSNSMIDKLCEKFKSKQYKSCMYNAAANELAEAFNKTICYLLKKIVYKSKRDWQERIDEAFGLIEPLITLLQGLHHIRLFTVYRLSFPSKKISSLRMA
MQEGLTTEDNVKLRLQELEDLMKSD