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Pay0018287 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018287
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol polyprotein
Genome locationchr11:23453987..23454463
RNA-Seq ExpressionPay0018287
SyntenyPay0018287
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033219.1 Pol polyprotein [Cucumis melo var. makuwa]2.6e-6991.61Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        G+TP SL+YGFEAVLPVEVEV SLRVIQE+ELDEAKWAQVRYEQLNFIEERRLTALC+GQLYQKKIARAYNKKVRH  FQEG+LVLKRILPFQKDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA
        TPNYEGPYIVK AFSGGALILTNMDGDDLPNPISA+YVKKYYA
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA

KAA0054571.1 Pol polyprotein [Cucumis melo var. makuwa]2.3e-7899.32Show/hide
Query:  LGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK
        L ATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK
Subjt:  LGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK

Query:  WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
        WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
Subjt:  WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD

KAA0065292.1 RNA-directed DNA polymerase [Cucumis melo var. makuwa]8.9e-7092.25Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        G+TP SL+YGFEAVLPVEVEV SLRVIQE+ELDEAKWAQVRYEQLNFIEERRLTALC+GQLYQKKIARAYNKKVRH HFQEG+LVLKRILPFQKDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYY
        TPNYEGPYIVK AFSGGALILTNMDGDDLPNPISA+YVKKYY
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYY

TYK20386.1 Pol polyprotein [Cucumis melo var. makuwa]2.3e-7897.33Show/hide
Query:  IILGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK
        +I GATPLSL+YGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRY+QLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK
Subjt:  IILGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK

Query:  GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
        GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
Subjt:  GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]1.8e-5472.03Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        GATP SL+YG EAVLP+EVE+ SLRV+ E +LDEA+W + RYEQLNFIEE+RLTAL  GQLYQK++ RAYNKKV    F+EGDLVLKRILPF KDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA
        TPNYEGP++VK AFSGGAL+LTNMDG +L NP++++YV++YYA
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA

TrEMBL top hitse value%identityAlignment
A0A151RXD7 Pol polyprotein (Fragment)1.6e-5370.63Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        GATP SL+YG EAVLP+EVE+ SLRV+ E +L+EA+W Q+RY+QLN IEE+RL ALC GQLYQK++ RAY+KKVR   FQEGDLVLK+ILP QKDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA
        TPNYEGPY+VK  F GGALILTNMDG+DL  P++ + VKKY+A
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA

A0A5A7SVL0 Pol polyprotein1.3e-6991.61Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        G+TP SL+YGFEAVLPVEVEV SLRVIQE+ELDEAKWAQVRYEQLNFIEERRLTALC+GQLYQKKIARAYNKKVRH  FQEG+LVLKRILPFQKDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA
        TPNYEGPYIVK AFSGGALILTNMDGDDLPNPISA+YVKKYYA
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYA

A0A5A7UM09 Pol polyprotein1.1e-7899.32Show/hide
Query:  LGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK
        L ATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK
Subjt:  LGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK

Query:  WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
        WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
Subjt:  WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD

A0A5A7VAF2 RNA-directed DNA polymerase4.3e-7092.25Show/hide
Query:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW
        G+TP SL+YGFEAVLPVEVEV SLRVIQE+ELDEAKWAQVRYEQLNFIEERRLTALC+GQLYQKKIARAYNKKVRH HFQEG+LVLKRILPFQKDH+GKW
Subjt:  GATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGKW

Query:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYY
        TPNYEGPYIVK AFSGGALILTNMDGDDLPNPISA+YVKKYY
Subjt:  TPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYY

A0A5D3D9Y9 Pol polyprotein1.1e-7897.33Show/hide
Query:  IILGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK
        +I GATPLSL+YGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRY+QLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK
Subjt:  IILGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHK

Query:  GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
        GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD
Subjt:  GKWTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGTTGCCTTTTGCATTATATAATATTAGGGGCAACTCCTCTTTCACTACTGTATGGTTTCGAAGCAGTTTTACCTGTTGAAGTTGAGGTGTCATCCCTTAGGGT
AATCCAAGAGGTAGAACTAGATGAAGCAAAGTGGGCTCAAGTAAGGTACGAGCAACTGAATTTCATAGAAGAAAGGAGACTGACTGCACTATGTAAAGGACAGTTGTACC
AAAAGAAAATAGCACGAGCGTATAACAAAAAAGTTCGACATCACCATTTCCAAGAAGGAGATCTAGTGTTAAAAAGGATCCTGCCTTTTCAAAAGGATCACAAAGGAAAA
TGGACTCCTAACTACGAGGGACCATATATAGTAAAAAATGCTTTCTCAGGAGGAGCTTTAATTTTGACAAATATGGACGGAGATGACTTGCCTAACCCAATAAGTGCAAA
CTATGTGAAGAAATACTATGCATGGAGCGACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGTTGCCTTTTGCATTATATAATATTAGGGGCAACTCCTCTTTCACTACTGTATGGTTTCGAAGCAGTTTTACCTGTTGAAGTTGAGGTGTCATCCCTTAGGGT
AATCCAAGAGGTAGAACTAGATGAAGCAAAGTGGGCTCAAGTAAGGTACGAGCAACTGAATTTCATAGAAGAAAGGAGACTGACTGCACTATGTAAAGGACAGTTGTACC
AAAAGAAAATAGCACGAGCGTATAACAAAAAAGTTCGACATCACCATTTCCAAGAAGGAGATCTAGTGTTAAAAAGGATCCTGCCTTTTCAAAAGGATCACAAAGGAAAA
TGGACTCCTAACTACGAGGGACCATATATAGTAAAAAATGCTTTCTCAGGAGGAGCTTTAATTTTGACAAATATGGACGGAGATGACTTGCCTAACCCAATAAGTGCAAA
CTATGTGAAGAAATACTATGCATGGAGCGACGATTAA
Protein sequenceShow/hide protein sequence
MKCCLLHYIILGATPLSLLYGFEAVLPVEVEVSSLRVIQEVELDEAKWAQVRYEQLNFIEERRLTALCKGQLYQKKIARAYNKKVRHHHFQEGDLVLKRILPFQKDHKGK
WTPNYEGPYIVKNAFSGGALILTNMDGDDLPNPISANYVKKYYAWSDD