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Pay0018475 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018475
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationchr05:3108780..3109934
RNA-Seq ExpressionPay0018475
SyntenyPay0018475
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061549.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]8.4e-1763.64Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSS
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMF  S
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSS

XP_004139345.1 uncharacterized protein LOC101209110 [Cucumis sativus]2.1e-1559.8Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASLKAVSRLSSRLQSL+PK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

XP_008458440.1 PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]9.3e-1660.78Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

XP_008458447.1 PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]4.6e-1563.16Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]6.0e-1558.82Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASLK VSRLSSRLQSL+PK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein1.0e-1559.8Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASLKAVSRLSSRLQSL+PK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

A0A1S3C7U8 uncharacterized protein LOC103497847 isoform X14.5e-1660.78Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

A0A1S3C7Z3 uncharacterized protein LOC103497847 isoform X22.2e-1563.16Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 64.1e-1763.64Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSS
        MASLKAVSRLSSRLQSLSPK                                  LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMF  S
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSS

A0A6J1KDE2 uncharacterized protein LOC1114938761.4e-1456.86Show/hide
Query:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        MASL+AVSRLSSRLQSL+PK                                  LP+ELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG+   S+
Subjt:  MASLKAVSRLSSRLQSLSPK----------------------------------LPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

Query:  PM
        P+
Subjt:  PM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein2.1e-1052.05Show/hide
Query:  VSRLSSRLQSLSP-----------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSLPM
        +S L S ++S SP           +LPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG+   S+P+
Subjt:  VSRLSSRLQSLSP-----------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSLPM

AT1G55205.2 unknown protein5.6e-1154.93Show/hide
Query:  VSRLSSRLQSLSP-----------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        +S L S ++S SP           +LPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG   SSL
Subjt:  VSRLSSRLQSLSP-----------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

AT1G70350.1 unknown protein3.9e-0446.81Show/hide
Query:  KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL
        ++PVELS+  SL+PLHS  A+A L S L++ +Q W  + +G F+S+L
Subjt:  KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSL

AT3G13674.1 unknown protein4.0e-0951.35Show/hide
Query:  VSRLSSRLQSLSP------------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSLPM
        VS L S ++S SP            +LPVELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQG+   SLP+
Subjt:  VSRLSSRLQSLSP------------KLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSLPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGC
TATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTCTCTTCATCCCTTCCAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGC
TATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTCTCTTCATCCCTTCCAATGTAA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLQSLSPKLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFSSSLPM