CuGenDBv2

Gene ID	Pay0018522
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	calreticulin 3
Genome location	chr06:8714019..8717106
RNA-Seq Expression	Pay0018522
Synteny	Pay0018522
Gene Ontology terms	GO:0002758 - innate immune response-activating signal transduction (biological process) GO:0006457 - protein folding (biological process) GO:0009626 - plant-type hypersensitive response (biological process) GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0042742 - defense response to bacterium (biological process) GO:0046283 - anthocyanin-containing compound metabolic process (biological process) GO:0005788 - endoplasmic reticulum lumen (cellular component) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0030246 - carbohydrate binding (molecular function) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR001580 - Calreticulin/calnexin IPR023409 - 14-3-3 protein, conserved site IPR023410 - 14-3-3 domain IPR036815 - 14-3-3 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152152.1 calreticulin-3 [Cucumis sativus]

6.2e-27

97.5

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFAR KEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

XP_008454121.1 PREDICTED: calreticulin-3 [Cucumis melo]

5.6e-28

98.75

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

XP_022145860.1 calreticulin-3 [Momordica charantia]

3.1e-26

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEA+RAREEGEKRRRERD+RHRDRRR+YRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

XP_022956146.1 calreticulin-3 [Cucurbita moschata]

1.3e-24

91.25

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVD+TFA N+EAEKEAFEEAEKERKAREEKEA+RAREEGEKRRRERD RH+DRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

XP_038898718.1 calreticulin-3 [Benincasa hispida]

3.1e-26

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEA+RAREEGE+RRRERD RHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTX6 Calreticulin

3.0e-27

97.5

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFAR KEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

A0A1S3BYM7 Calreticulin

2.7e-28

98.75

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

A0A5A7TT24 Calreticulin

2.7e-28

98.75

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

A0A6J1CVQ1 Calreticulin

1.5e-26

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEA+RAREEGEKRRRERD+RHRDRRR+YRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

A0A6J1GVS0 Calreticulin

6.2e-25

91.25

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGSVF NILICDDPQYAKEVVD+TFA N+EAEKEAFEEAEKERKAREEKEA+RAREEGEKRRRERD RH+DRRRHYRR
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

SwissProt top hits

e value

%identity

Alignment

O04153 Calreticulin-3

6.4e-19

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGS+F NILICDDP YA+ +VDD FA+++E+EKE F EAEKERKARE++EA+ AREEGE+RR+ERD+R+ DRRR Y+R
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

P48348 14-3-3-like protein GF14 kappa

8.1e-14

92.68

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ

P48349 14-3-3-like protein GF14 lambda

8.1e-14

92.68

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ

P93207 14-3-3 protein 10

2.1e-14

95.12

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ

Q96451 14-3-3-like protein B (Fragment)

6.2e-14

92.68

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G08450.1 calreticulin 3

4.6e-20

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGS+F NILICDDP YA+ +VDD FA+++E+EKE F EAEKERKARE++EA+ AREEGE+RR+ERD+R+ DRRR Y+R
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

AT1G08450.2 calreticulin 3

4.6e-20

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGS+F NILICDDP YA+ +VDD FA+++E+EKE F EAEKERKARE++EA+ AREEGE+RR+ERD+R+ DRRR Y+R
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

AT1G08450.3 calreticulin 3

4.6e-20

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Query:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR
        VKAGS+F NILICDDP YA+ +VDD FA+++E+EKE F EAEKERKARE++EA+ AREEGE+RR+ERD+R+ DRRR Y+R
Subjt:  VKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRR

AT5G10450.4 G-box regulating factor 6

5.2e-16

84.78

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVSEHH
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q ++ H
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVSEHH

AT5G65430.2 general regulatory factor 8

8.9e-16

88.64

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Query:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVSE
        ++AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q+ E
Subjt:  RRAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVSE

Sequences

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CDS sequence

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ATGTATGGTGGTTTGGTTTTTCTTACTGAGCTTGTAAAAGCTGGATCAGTTTTTTACAACATTTTGATATGCGATGACCCCCAGTATGCAAAGGAAGTTGTTGATGATAC
GTTTGCAAGAAATAAGGAGGCTGAAAAGGAAGCTTTTGAGGAAGCAGAAAAAGAAAGGAAGGCTAGGGAAGAAAAGGAGGCTCAAAGGGCTCGAGAGGAAGGTGAAAAGA
GAAGAAGGGAGCGAGACTATCGTCATAGAGATAGGAGGCGGCATTATCGAAGGGCCTTTGAGGAAGCCATTGCTGAGCTGGACACTCTGGGTGAAGAATCATACAAGGAC
AGTACCCTCATCATGCAACTATTGAGGGACAACCTTACTCTCTGGACTTCAGATGCGCAGGTCAGTGAACACCATCCACCCTAA

mRNA sequence

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Protein sequence

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MYGGLVFLTELVKAGSVFYNILICDDPQYAKEVVDDTFARNKEAEKEAFEEAEKERKAREEKEAQRAREEGEKRRRERDYRHRDRRRHYRRAFEEAIAELDTLGEESYKD
STLIMQLLRDNLTLWTSDAQVSEHHPP

Pay0018522 (gene) of Melon (Payzawat) v1 genome