; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018579 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018579
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
Genome locationchr01:31957693..31959660
RNA-Seq ExpressionPay0018579
SyntenyPay0018579
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067975.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]5.0e-9199.44Show/hide
Query:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
        +RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
Subjt:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TYK18148.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]1.5e-9098.88Show/hide
Query:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
        +RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFAL+DASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
Subjt:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_004136017.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Cucumis sativus]9.1e-9396.35Show/hide
Query:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL
        MAAT ACSSLSSIRRGFKYHPQRNPN KFQAIKCSSSLLGSFTSSK L SLAYVIPPLKPAAAYEAARTIPF LQDASMAASDFVNSMTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL

Query:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_008451549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]3.2e-98100Show/hide
Query:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL
        MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL

Query:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_031745003.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Cucumis sativus]1.9e-9095.34Show/hide
Query:  MAATAACSSLSSIR-RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAK
        MAAT ACSSLSSIR  GFKYHPQRNPN KFQAIKCSSSLLGSFTSSK L SLAYVIPPLKPAAAYEAARTIPF LQDASMAASDFVNSMTLADLDPGTAK
Subjt:  MAATAACSSLSSIR-RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAK

Query:  LAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        LAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGLLVLLSQQVS
Subjt:  LAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TrEMBL top hitse value%identityAlignment
A0A0A0K9A7 Uncharacterized protein1.3e-8987.68Show/hide
Query:  MAATAACSSLSSIR-------------------RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAA
        MAAT ACSSLSSIR                   RGFKYHPQRNPN KFQAIKCSSSLLGSFTSSK L SLAYVIPPLKPAAAYEAARTIPF LQDASMAA
Subjt:  MAATAACSSLSSIR-------------------RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAA

Query:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ
        SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQ
Subjt:  SDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ

Query:  GLLVLLSQQVS
        GLLVLLSQQVS
Subjt:  GLLVLLSQQVS

A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic1.6e-98100Show/hide
Query:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL
        MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKL

Query:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB32.4e-9199.44Show/hide
Query:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
        +RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
Subjt:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5D3D3A7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB37.0e-9198.88Show/hide
Query:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
        +RGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFAL+DASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS
Subjt:  RRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A6J1CUU2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X35.0e-8183.94Show/hide
Query:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAK
        MAA A CSSL+SIRRGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFALQDASMAASDF  +M LADLDP TAK
Subjt:  MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAK

Query:  LAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        LAI FLGP LS FSFLFI RIVMSWYPKLPVGKFPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  LAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic8.1e-4473.81Show/hide
Query:  EAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  S+  S+ + +++LADLDPGTAKLAI  LGP+LS F FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein1.7e-0425.64Show/hide
Query:  SSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDA---SMAASDFVNSMTLADLDPGTAKLAISFLGPS----LSVFSFLFIARIVMSWYPK
        SS+L GS  S   L +LA  +  +       A +T    + D    S++ +  V   +L D  PG     ++ +       L ++S + + R+++SW+P 
Subjt:  SSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDA---SMAASDFVNSMTLADLDPGTAKLAISFLGPS----LSVFSFLFIARIVMSWYPK

Query:  LPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  I+ G  G
Subjt:  LPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT4G27990.1 YGGT family protein6.4e-0429.33Show/hide
Query:  LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        L ++S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  IL   +G
Subjt:  LSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT5G36120.1 cofactor assembly, complex C (B6F)5.8e-4573.81Show/hide
Query:  EAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  S+  S+ + +++LADLDPGTAKLAI  LGP+LS F FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCTGCCTGCTCCTCTCTCAGCTCCATTCGAAGAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTAGC
TCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGATTCTTCCGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATC
CCCTTTGCCTTGCAAGATGCATCAATGGCTGCCTCTGATTTTGTGAACAGTATGACCTTGGCTGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTG
GGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCAGTGGGGAAGTTTCCATATGTTATAGCTTATGCC
CCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAG
ATATTGCTCGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAAGTCAGCTAA
mRNA sequenceShow/hide mRNA sequence
CTCAAACGCAATTTTTCCCATTGATGATAAAGGGATAGCCTTCTCATTCTTCCTCCAGCGGAGCTCCTCTGTGAAACCCATGGCCGCCACCGCTGCCTGCTCCTC
TCTCAGCTCCATTCGAAGAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTAGCTCATCTTTGTTGGGTTCTTTTACCTC
TTCCAAGATTCTTCCGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCAAT
GGCTGCCTCTGATTTTGTGAACAGTATGACCTTGGCTGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTT
TTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCAGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAAC
AAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGCT
TGTCCTCCTTTCTCAACAAGTCAGCTAAATCTTGATGAGAATGCTTCAGAGAAACATTCTTTTGTTTTTTAGTTCTGTATATGCAACTGATCTTCTTAGCTGAGC
CTCTTTGGTTCCAAAAGGCAAAGGATGTGAGAACTTGAAATTCTTAATGAAAGAAAATTTTCCTCATCCTAGAGAGTGTAATCAGTTCAGCTTCAGATTGGTTTT
GAGCTAAAACTGACTTGACCTTGTGTCGTTTTGAGAAGATTGAACGTTGTTTGAAAATTTGATCTTTCAAGTTCCGAGCTAATCAAACTTTAATTTCTAGATAAA
AATGTTGATTGAGGTCACATTGCCATTGGCTTGAAGGTGATTTTATTCTTCCAAACAAAACAAAGCTTTTTATGAGATTATTTTACCATTGTCTAGCATTTGTAT
TTTCAAAATGTATATTTTG
Protein sequenceShow/hide protein sequence
MAATAACSSLSSIRRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFL
GPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS