; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018762 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018762
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchr05:27628594..27631602
RNA-Seq ExpressionPay0018762
SyntenyPay0018762
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]4.5e-13993.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPP
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]1.0e-151100Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]8.2e-12586.29Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_023547209.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-11581.21Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP+ SS  SNAF+ RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        HDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]4.0e-13290.27Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSG FPFK LLSQS+ A+TT+  AAA TSSSS TPFRTS   LP+SSS  +NAFK RL KSNSLRLV SFPVSSPIRTSVF+R GGAPRSSGP DSK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV
        HDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-32.2e-13993.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPP
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-35.0e-152100Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-34.0e-12586.29Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-31.3e-11581.21Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP+ SS  SNAF+ RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        HDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

A0A6J1KDY9 Translation initiation factor IF-31.3e-11581.21Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP  SS  SNA + RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SK
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        HDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-39.3e-3140.91Show/hide
Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  +       IR   +R+ID+  + +G+++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic4.0e-7461.37Show/hide
Query:  SSSTTPFR------TSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVR
        +SST  F       T T S     S +S    LRL K+    L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS  VR
Subjt:  SSSTTPFR------TSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVR

Query:  LIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK
        LID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDK
Subjt:  LIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK

Query:  VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        VKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

Q8R9C2 Translation initiation factor IF-31.2e-3043.48Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   VRLID     +G++S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-34.6e-3044.79Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   +R+ID   + +G+++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM Y I++HDY+VR+K A++
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK
        FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic1.0e-7773.24Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein6.7e-0830.68Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + +   VVS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +         PPKK
Subjt:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein2.8e-7561.37Show/hide
Query:  SSSTTPFR------TSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVR
        +SST  F       T T S     S +S    LRL K+    L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS  VR
Subjt:  SSSTTPFR------TSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVR

Query:  LIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK
        LID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDK
Subjt:  LIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK

Query:  VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        VKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein7.2e-7973.24Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein7.3e-6362.44Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                  
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
                    YNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTTCCACCACCACCTCCCCCGCCGCTGCCCCAACTTCCTCCTCTTCCACTAC
TCCCTTCCGAACCTCAACTCCCTCTCTTCCCATCTCCTCCTCCTTTAATTCCAATGCCTTCAAACTCCGCCTTCACAAATCCAACTCTCTACGTCTCGTCTTTTCCTTTC
CCGTTTCCTCTCCGATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAAGCGCTCTAACGATGAATTTGGTCTCGATGTT
TCCGCCATCAGGTCAAATAATGTGAGGCTTATCGATGCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCATTCAGATGGCTGAAGACGCTGAACTTGATTT
GGTTGTATTATCTCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTG
CAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTACAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGATGGAGACAAGGTT
AAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACCGAAGAGGCCAA
AAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTT
CTGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGAATAGAGTTTGAGTGATGAGTTTACTCCAAAATTCAAACCATTGTGGATAAGATTTCTTTTTTCTTAAAAAATAATTTTAAAAGAAAAAATCCCCAAGCTCCCAC
CCACCACTGCCCCCTTCCACAGCTCAAAGCTATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTTCCACCACCACCTCCCCCG
CCGCTGCCCCAACTTCCTCCTCTTCCACTACTCCCTTCCGAACCTCAACTCCCTCTCTTCCCATCTCCTCCTCCTTTAATTCCAATGCCTTCAAACTCCGCCTTCACAAA
TCCAACTCTCTACGTCTCGTCTTTTCCTTTCCCGTTTCCTCTCCGATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAA
GCGCTCTAACGATGAATTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAATGTGAGGCTTATCGATGCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCA
TTCAGATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCTCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAA
AAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTACAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGC
AAAGAAATTTTTAAAAGATGGAGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAG
AAGTTGGGGAGCTTGCAACCGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAG
AAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAAGCTCAGGAATCGTCGAGCTTTCGCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTC
TACCATATAGAAATTTGAGAGTTTAAATGTATAATGTTTTTGTTTAATCTTATGCATCAAACTGTTGTTCGTCCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGT
TACTAATTCTTTAGAAAACATCAATTCATATAACCATCCTTTGCTCTGACCATAGTTTTTAGTGCCTTGGAGGATGGTGTCTTGGTGAGTTGATTTGAACCAATAACTAA
CAACTAACAACTAACTAGTATGGTCGTTTTATTGTGAATTATACATAGCAAGGACATAGTTAGGTAATTTGTCTCCTTCGGGC
Protein sequenceShow/hide protein sequence
MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDV
SAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKV
KVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV