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Pay0018785 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018785
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA polymerase
Genome locationchr06:20950576..20951745
RNA-Seq ExpressionPay0018785
SyntenyPay0018785
Gene Ontology termsGO:0006269 - DNA replication, synthesis of RNA primer (biological process)
GO:0006272 - leading strand elongation (biological process)
GO:0006273 - lagging strand elongation (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:1902975 - mitotic DNA replication initiation (biological process)
GO:0005658 - alpha DNA polymerase:primase complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003688 - DNA replication origin binding (molecular function)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003896 - DNA primase activity (molecular function)
GO:0017076 - purine nucleotide binding (molecular function)
GO:0019103 - pyrimidine nucleotide binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035182.1 DNA polymerase alpha catalytic subunit [Cucurbita argyrosperma subsp. argyrosperma]4.8e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++AT RL ALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
XP_008457764.1 PREDICTED: DNA polymerase alpha catalytic subunit [Cucumis melo]2.1e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++A  RLTALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
XP_011649321.1 DNA polymerase alpha catalytic subunit [Cucumis sativus]2.1e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++A  RLTALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
XP_023007070.1 DNA polymerase alpha catalytic subunit [Cucurbita maxima]4.8e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++AT RL ALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
XP_023534068.1 DNA polymerase alpha catalytic subunit [Cucurbita pepo subsp. pepo]4.8e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++AT RL ALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
TrEMBL top hitse value%identityAlignment
A0A0A0LPU1 DNA polymerase1.0e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++A  RLTALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
A0A1S3C6X9 DNA polymerase1.0e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++A  RLTALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
A0A5A7TSE8 DNA polymerase1.0e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++A  RLTALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
A0A6J1G8C4 DNA polymerase2.3e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++AT RL ALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
A0A6J1L1Z1 DNA polymerase2.3e-0879.07Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
        + RSRG++AT RL ALERLKAIR  GRRSEAGGF VKLENPIY
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIY
SwissProt top hitse value%identityAlignment
Q9FHA3 DNA polymerase alpha catalytic subunit7.4e-0452.27Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRS-EAGGFHVKLENPIY
        + RSRGA+A+ R   LERLKAIR  G RS   GG+ ++L+ PI+
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRS-EAGGFHVKLENPIY
Arabidopsis top hitse value%identityAlignment
AT5G67100.1 DNA-directed DNA polymerases5.3e-0552.27Show/hide
Query:  KERSRGAKATGRLTALERLKAIRGSGRRS-EAGGFHVKLENPIY
        + RSRGA+A+ R   LERLKAIR  G RS   GG+ ++L+ PI+
Subjt:  KERSRGAKATGRLTALERLKAIRGSGRRS-EAGGFHVKLENPIY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGTGATAATGAGAGCATACCAACGAATGAAATCGAAGATGTGAATGTGGGGGAGGAGATCAAATTGAAAGAGAGGAGCCGAGGAGCTAAGGCAACCGGCCGACT
TACGGCTCTCGAACGTCTTAAAGCCATCCGCGGTAGTGGTCGTCGATCGGAAGCCGGTGGTTTCCATGTGAAGTTGGAAAATCCTATCTACACGATACGAATTAAGAAAA
AGGAGACTGTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGTGATAATGAGAGCATACCAACGAATGAAATCGAAGATGTGAATGTGGGGGAGGAGATCAAATTGAAAGAGAGGAGCCGAGGAGCTAAGGCAACCGGCCGACT
TACGGCTCTCGAACGTCTTAAAGCCATCCGCGGTAGTGGTCGTCGATCGGAAGCCGGTGGTTTCCATGTGAAGTTGGAAAATCCTATCTACACGATACGAATTAAGAAAA
AGGAGACTGTCAAGTAG
Protein sequenceShow/hide protein sequence
MRSDNESIPTNEIEDVNVGEEIKLKERSRGAKATGRLTALERLKAIRGSGRRSEAGGFHVKLENPIYTIRIKKKETVK