; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0018883 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018883
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationchr12:12894893..12895346
RNA-Seq ExpressionPay0018883
SyntenyPay0018883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-4291.4Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        MVSGPLLSAFQG PFHDVHL RSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLW  KSDN SLVGFA ADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

KAA0067211.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.5e-5477.62Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPN
                         VPRN+LLFP LVLKLN VALLFWQPN
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPN

TYK18914.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-5277.14Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNK CQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFW
                         VPRN+LLFP LVLKLNIVALLFW
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFW

XP_016900879.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]6.4e-5877.85Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPNWYGFVL
                         VPRN+LLFP LVLKLN VALLFWQPNWYGF L
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPNWYGFVL

XP_016902768.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.5e-48100Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

TrEMBL top hitse value%identityAlignment
A0A1S4DY15 uncharacterized mitochondrial protein AtMg00810-like3.1e-5877.85Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPNWYGFVL
                         VPRN+LLFP LVLKLN VALLFWQPNWYGF L
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPNWYGFVL

A0A1S4E3G7 uncharacterized mitochondrial protein AtMg00810-like1.7e-48100Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

A0A5A7UFS3 Putative mitochondrial protein8.2e-4391.4Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        MVSGPLLSAFQG PFHDVHL RSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLW  KSDN SLVGFA ADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

A0A5A7VNM1 Putative mitochondrial protein1.2e-5477.62Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNKACQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPN
                         VPRN+LLFP LVLKLN VALLFWQPN
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFWQPN

A0A5D3D5S6 Putative mitochondrial protein1.1e-5277.14Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------
        MVSGPLLSAFQG PFHDVHLYRSV GALQYATLTHPEISYSVNK CQFMHTPKHTHWQL+KRILRYLKGVLYHGLWFRKSDNMSL GFA ADW       
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW-------

Query:  --------------YLRVPRNSLLFPSLVLKLNIVALLFW
                         VPRN+LLFP LVLKLNIVALLFW
Subjt:  --------------YLRVPRNSLLFPSLVLKLNIVALLFW

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1612.0e-0940.54Show/hide
Query:  YRSVAGALQY-ATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        Y S  GA+ Y   +T P+++ +V    QF   P  THWQ +KR+LRYL+    +GL F ++    LVG++ ADW
Subjt:  YRSVAGALQY-ATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

P92519 Uncharacterized mitochondrial protein AtMg008101.7e-1644.32Show/hide
Query:  LLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        L S+     + D   +RS+ GALQY TLT P+ISY+VN  CQ MH P    + L+KR+LRY+KG ++HGL+  K+  +++  F  +DW
Subjt:  LLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

P93290 Uncharacterized mitochondrial protein AtMg002407.0e-0728.04Show/hide
Query:  YATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYAD--------------------WYLRVPRNSLLFPSLVL
        Y T+T P+++++VN+  QF    +    Q + ++L Y+KG +  GL++  + ++ L  FA +D                    W+L   R S+L P L+ 
Subjt:  YATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYAD--------------------WYLRVPRNSLLFPSLVL

Query:  KLNIVAL
        + NI AL
Subjt:  KLNIVAL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.7e-1845.16Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        M   P LS + G    D   YR + G+LQY   T P+ISY+VN+  QFMH P   H Q +KRILRYL G   HG++ +K + +SL  ++ ADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-1740.86Show/hide
Query:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        M + P L+   G    D   YR + G+LQY   T P++SY+VN+  Q+MH P   HW  +KR+LRYL G   HG++ +K + +SL  ++ ADW
Subjt:  MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.4e-1037.21Show/hide
Query:  SAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        SA  G  F D   YR + G L Y  +T  +IS++VNK  QF   P+  H Q + +IL Y+KG +  GL++     M L  F+ A +
Subjt:  SAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.9e-0828.04Show/hide
Query:  YATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYAD--------------------WYLRVPRNSLLFPSLVL
        Y T+T P+++++VN+  QF    +    Q + ++L Y+KG +  GL++  + ++ L  FA +D                    W+L   R S+L P L+ 
Subjt:  YATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYAD--------------------WYLRVPRNSLLFPSLVL

Query:  KLNIVAL
        + NI AL
Subjt:  KLNIVAL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-1744.32Show/hide
Query:  LLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW
        L S+     + D   +RS+ GALQY TLT P+ISY+VN  CQ MH P    + L+KR+LRY+KG ++HGL+  K+  +++  F  +DW
Subjt:  LLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGTGGTCCTTTACTTTCTGCTTTTCAAGGGAGACCATTTCATGATGTGCATCTGTATAGAAGTGTTGCTGGTGCATTACAGTATGCCACACTTACTCATCCTGA
GATATCATATAGTGTCAATAAAGCTTGCCAATTTATGCATACTCCAAAACATACACACTGGCAGCTTATGAAGAGAATTCTAAGATATCTTAAAGGTGTACTATATCATG
GTTTATGGTTTCGCAAGTCTGATAATATGTCCTTAGTTGGTTTTGCTTATGCGGATTGGTATCTTAGGGTTCCAAGAAACAGTCTATTATTTCCAAGTCTAGTACTAAAG
CTGAATATCGTTGCCTTGCTCTTTTGGCAACCGAACTGGTATGGATTCGTTCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGTGGTCCTTTACTTTCTGCTTTTCAAGGGAGACCATTTCATGATGTGCATCTGTATAGAAGTGTTGCTGGTGCATTACAGTATGCCACACTTACTCATCCTGA
GATATCATATAGTGTCAATAAAGCTTGCCAATTTATGCATACTCCAAAACATACACACTGGCAGCTTATGAAGAGAATTCTAAGATATCTTAAAGGTGTACTATATCATG
GTTTATGGTTTCGCAAGTCTGATAATATGTCCTTAGTTGGTTTTGCTTATGCGGATTGGTATCTTAGGGTTCCAAGAAACAGTCTATTATTTCCAAGTCTAGTACTAAAG
CTGAATATCGTTGCCTTGCTCTTTTGGCAACCGAACTGGTATGGATTCGTTCTCTCTTGA
Protein sequenceShow/hide protein sequence
MVSGPLLSAFQGRPFHDVHLYRSVAGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLMKRILRYLKGVLYHGLWFRKSDNMSLVGFAYADWYLRVPRNSLLFPSLVLK
LNIVALLFWQPNWYGFVLS