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Pay0018940 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0018940
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionAuxin response factor
Genome locationchr08:20050010..20050854
RNA-Seq ExpressionPay0018940
SyntenyPay0018940
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050656.1 auxin response factor 18 isoform X2 [Cucumis melo var. makuwa]9.3e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
XP_004139643.1 auxin response factor 18 isoform X1 [Cucumis sativus]9.3e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
XP_008467007.2 PREDICTED: auxin response factor 11, partial [Cucumis melo]9.3e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
XP_011659155.1 auxin response factor 18 isoform X2 [Cucumis sativus]9.3e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
XP_016902758.1 PREDICTED: auxin response factor 11-like [Cucumis melo]4.2e-1282.22Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEE PGESHKGLEGED+YEELWKACAGPLVEVPI  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
TrEMBL top hitse value%identityAlignment
A0A0A0K887 Auxin response factor4.5e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
A0A1S3CSJ1 auxin response factor 114.5e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
A0A1S4E3F7 auxin response factor 11-like2.0e-1282.22Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEE PGESHKGLEGED+YEELWKACAGPLVEVPI  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
A0A5A7U902 Auxin response factor4.5e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
A0A5D3C9C4 Auxin response factor4.5e-1280Show/hide
Query:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        MTLYEENPGES KGLEGED+YEELWKACAGPLVEVP+  +  F F
Subjt:  MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
SwissProt top hitse value%identityAlignment
Q9XED8 Auxin response factor 99.7e-0435.59Show/hide
Query:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI
        GE +Y+ELWK CAGPLV+VP  ++  + F +    +    +  +     KPL +L  +I
Subjt:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI
Arabidopsis top hitse value%identityAlignment
AT2G46530.1 auxin response factor 113.4e-0456.25Show/hide
Query:  GLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        G   +++Y ELWKACAGPLVEVP   +  F F
Subjt:  GLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
AT2G46530.3 auxin response factor 113.4e-0456.25Show/hide
Query:  GLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        G   +++Y ELWKACAGPLVEVP   +  F F
Subjt:  GLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
AT3G61830.1 auxin response factor 189.9e-0443.9Show/hide
Query:  EENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
        +++ G S      + +Y ELWK CAGPLVEVP  ++  F F
Subjt:  EENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTF
AT4G23980.1 auxin response factor 96.9e-0535.59Show/hide
Query:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI
        GE +Y+ELWK CAGPLV+VP  ++  + F +    +    +  +     KPL +L  +I
Subjt:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI
AT4G23980.2 auxin response factor 96.9e-0535.59Show/hide
Query:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI
        GE +Y+ELWK CAGPLV+VP  ++  + F +    +    +  +     KPL +L  +I
Subjt:  GEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTTTATGAAGAGAATCCAGGGGAGTCTCACAAAGGTTTGGAAGGTGAGGATATGTATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTAT
CATGGAGAAAGGGTTTTTTACTTTCCGTAGGGTCATATGGAACAAGTATTTTGTCATCTCTTTGTCAATTTCACCCTTGAAACAAAAACCCCTCATAATCTTAGAGGCTG
AAATTTCTTCTGCTTTTTGGTTCTTCATTAGTTGGAAGAGTCCACAAATCAGAAGCTTAATCTCCAAATCCCTCATTTTGGTCTCCCTCCCAAGATCCTATGTAGTGTTG
TTAACATTTGTTTGTTGGTATTTCTTATTTTCTCTTTTGTTCATGTACACTTGCCTACTTTGTTTCTGTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGAAACAAGGGTGAGTAAATAAACTTGTACGGTTAATTATGATTGCTTGCTTAACCGTCCTGTTTTCTTAGCTTTTTCTCTCTCTCTCTCTCTCTTTCTTTTGT
GGCTTGTCCTTTGATTGATCGGTAGATGGGGTAGCAGTAGCACGATAGTTTACCATTCTTTCAGAGAGAGAGAGAGAGAGAAGAGAGAGACCCTTTGTCCCCTGTTCCTA
TCTTCTTCTTTGGTTTCTCTTGTTGTTCTTCAATCTTTGGCATTTTAGACTGAGACCCATTTTCTTAATTTGGATGACGCTTTATGAAGAGAATCCAGGGGAGTCTCACA
AAGGTTTGGAAGGTGAGGATATGTATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTATCATGGAGAAAGGGTTTTTTACTTTCCGTAGGGTCATA
TGGAACAAGTATTTTGTCATCTCTTTGTCAATTTCACCCTTGAAACAAAAACCCCTCATAATCTTAGAGGCTGAAATTTCTTCTGCTTTTTGGTTCTTCATTAGTTGGAA
GAGTCCACAAATCAGAAGCTTAATCTCCAAATCCCTCATTTTGGTCTCCCTCCCAAGATCCTATGTAGTGTTGTTAACATTTGTTTGTTGGTATTTCTTATTTTCTCTTT
TGTTCATGTACACTTGCCTACTTTGTTTCTGTTGATTTTTCATGCTCATTTTCTTCTTTTGCTTTCA
Protein sequenceShow/hide protein sequence
MTLYEENPGESHKGLEGEDMYEELWKACAGPLVEVPIMEKGFFTFRRVIWNKYFVISLSISPLKQKPLIILEAEISSAFWFFISWKSPQIRSLISKSLILVSLPRSYVVL
LTFVCWYFLFSLLFMYTCLLCFC