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Pay0019032 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019032
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationchr10:11194623..11195990
RNA-Seq ExpressionPay0019032
SyntenyPay0019032
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032138.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]1.9e-49100Show/hide
Query:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
        MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
Subjt:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV

Query:  RQ
        RQ
Subjt:  RQ

KYP37344.1 hypothetical protein KK1_041463 [Cajanus cajan]6.3e-0841.58Show/hide
Query:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
        KR+ ++  S  L   K+E  E   ++K  E      SL   +   P+  R   IF+LDNA L KGLV K+WKIL+S  D QFLLK  KNL D+ P+ + +
Subjt:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ

Query:  V
        V
Subjt:  V

TYK14381.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]9.2e-68100Show/hide
Query:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
        MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
Subjt:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV

Query:  RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS
        RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS
Subjt:  RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS

XP_008456875.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]6.7e-26100Show/hide
Query:  MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
        MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
Subjt:  MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ

XP_038891816.1 ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]5.6e-4188.24Show/hide
Query:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
        M  QKRRNS+S SSKLAR KQE VENLDELKNVEDV T SSLLD++NEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD QFLLKHKKNLKDFCPENV
Subjt:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV

Query:  RQ
        RQ
Subjt:  RQ

TrEMBL top hitse value%identityAlignment
A0A151R404 Uncharacterized protein8.9e-0841Show/hide
Query:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
        KR+ ++  S  L   K+E  E   ++K  E      SL   +   P+  R   IF+LDNA L KGLV K+WKIL+S  D QFLLK  KNL D+ P+ + +
Subjt:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ

A0A151R426 Uncharacterized protein3.0e-0841.58Show/hide
Query:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
        KR+ ++  S  L   K+E  E   ++K  E      SL   +   P+  R   IF+LDNA L KGLV K+WKIL+S  D QFLLK  KNL D+ P+ + +
Subjt:  KRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESR--VIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ

Query:  V
        V
Subjt:  V

A0A1S3C5G9 ribosomal RNA small subunit methyltransferase NEP1-like3.2e-26100Show/hide
Query:  MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
        MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ
Subjt:  MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQ

A0A5A7SNC0 Ribosomal RNA small subunit methyltransferase NEP1-like9.4e-50100Show/hide
Query:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
        MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
Subjt:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV

Query:  RQ
        RQ
Subjt:  RQ

A0A5D3CRG9 Ribosomal RNA small subunit methyltransferase NEP1-like4.5e-68100Show/hide
Query:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
        MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV
Subjt:  MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENV

Query:  RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS
        RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS
Subjt:  RQVAFNPVLYNARSVDKDFVEKEANKSLDHSTAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGG
TACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCATGGAGAGATCATCAGTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTTGTCCTGAAAATGTTCGTCAGGTTGCCTTCAACCCTGTCCTCTAC
AATGCAAGGTCGGTGGATAAGGATTTTGTTGAAAAGGAGGCCAACAAGAGTTTAGATCATTCCACAGCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGG
TACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCATGGAGAGATCATCAGTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTTGTCCTGAAAATGTTCGTCAGGTTGCCTTCAACCCTGTCCTCTAC
AATGCAAGGTCGGTGGATAAGGATTTTGTTGAAAAGGAGGCCAACAAGAGTTTAGATCATTCCACAGCTTCTTAA
Protein sequenceShow/hide protein sequence
MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQVAFNPVLY
NARSVDKDFVEKEANKSLDHSTAS