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Pay0019048 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019048
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPhycobilisome rod-core linker polypeptide CpcG2 like
Genome locationchr04:32995311..32998125
RNA-Seq ExpressionPay0019048
SyntenyPay0019048
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137707.1 uncharacterized protein LOC101209674 [Cucumis sativus]1.4e-2795.77Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
        MAGGNF+HRVFSYLVNEVLVNSLANSRSFQRFAV+TSKQIEDIS KAAQKKQELAEQVKDFSKNFDSFKNH
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
XP_008442394.1 PREDICTED: uncharacterized protein LOC103486274 [Cucumis melo]1.3e-28100Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
        MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]1.5e-2491.43Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSR+FQRFAV+TSKQIEDIS KAAQKKQELAEQVKD SKNFDSFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
XP_022949523.1 uncharacterized protein LOC111452848 [Cucurbita moschata]1.1e-2491.43Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSRSFQRFAV+TSKQIEDISTKAAQKKQELAEQ+KD SKNF+SFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]4.3e-2490Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSR+FQRFAV+TSKQIEDIS KAA+KKQELAEQVKD SKNFDSFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
TrEMBL top hitse value%identityAlignment
A0A0A0L9U5 Uncharacterized protein7.0e-2895.77Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
        MAGGNF+HRVFSYLVNEVLVNSLANSRSFQRFAV+TSKQIEDIS KAAQKKQELAEQVKDFSKNFDSFKNH
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
A0A1S3B691 uncharacterized protein LOC1034862746.3e-29100Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
        MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH
A0A6J1F5E7 uncharacterized protein LOC1114424707.2e-2591.43Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSR+FQRFAV+TSKQIEDIS KAAQKKQELAEQVKD SKNFDSFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
A0A6J1GCB5 uncharacterized protein LOC1114528485.5e-2591.43Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSRSFQRFAV+TSKQIEDISTKAAQKKQELAEQ+KD SKNF+SFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
A0A6J1I5H8 uncharacterized protein LOC1114701025.5e-2591.43Show/hide
Query:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
        MAGGNF+HRV SYLVNEVLVNSLANSRSFQRFAV+TSKQIEDISTKAAQKKQELAEQ+KD SKNF+SFKN
Subjt:  MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein4.6e-1658.21Show/hide
Query:  GGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFK
        GGNFI RV SY+ NE +VN LANS +FQRFAV+TSK+IE++S  AA+ ++++A+Q+++F+KN DS K
Subjt:  GGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATCCACAGAGTATTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTTCCTTTCAAAGGTTTGCTGTGAAGACATC
GAAACAAATTGAGGATATATCTACCAAGGCTGCACAGAAGAAGCAAGAACTTGCAGAACAAGTGAAAGATTTCTCCAAGAATTTTGATTCTTTCAAGAACCATTAA
mRNA sequenceShow/hide mRNA sequence
ATAGACATCGTGGTTGGCTTGCGATTGAGGGAAATTAGGGCATCATACTTCTGTCTTCTCCAACGCTATTTTTACGCATCTGAATTGGCATTGATTTATTTTAATTTCTG
GAAACGAGCATGGCGGGTGGAAATTTCATCCACAGAGTATTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTTCCTTTCAAAGGTTTGCTGT
GAAGACATCGAAACAAATTGAGGATATATCTACCAAGGCTGCACAGAAGAAGCAAGAACTTGCAGAACAAGTGAAAGATTTCTCCAAGAATTTTGATTCTTTCAAGAACC
ATTAATGTGGAGTGGAACGTTTTATGGCAACATGATGTAAATCCTATTCCAATTTTACTCTTAATAGTCGCAGATTCCCCGAAGATTTGTTTAATAACCTTATCTTGTCT
ACGTGTTTTGTAATTGTGACAGTAGAATTCTAGATTTGTTCTTGGTTACCCGGTTGCCTTTGCCTGTAATTGAAGCGAAGATGAACTGATTTCTTCCTTGGCTTATGCCT
GCATGTATCTGATTTTGTAGCTTTTTTCCCCGCCATTATCATCATTGGACAGTGGGACTTTTAAATAGGTCTTGAAACAAAGACATGGCAATTGAAAGTCATAACAAGTT
TGCTTTCGATTTTTTAACGAAACACATTTTTCTTTAGGGAAAATCTACATTTTTGGTCCTGGAGGTGGAGGTATAAAGGCGTATCAGTTCTCAAAACATATCTGAATTCT
GAGTTCAAGATAAGAGGTGTATTTAGTTTTGAGTTTTCAATAGGTATCGTTGTAGTTTTCATTTTTTAAAAAAAGAAGCAG
Protein sequenceShow/hide protein sequence
MAGGNFIHRVFSYLVNEVLVNSLANSRSFQRFAVKTSKQIEDISTKAAQKKQELAEQVKDFSKNFDSFKNH