CuGenDBv2

Gene ID	Pay0019072
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty3-gypsy retrotransposon protein
Genome location	chr06:4908627..4909892
RNA-Seq Expression	Pay0019072
Synteny	Pay0019072
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR005162 - Retrotransposon gag domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037441.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

4.7e-235

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPP FQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNV PLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

KAA0058295.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.4e-234

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKH VKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVI+YINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
         DEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQA KVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRK+LI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

KAA0061565.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

2.5e-236

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIAS SVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRG KDFLIPKSRSDKNE DDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAR+KKIEL+IDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRK+LI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

TYK14887.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

7.3e-236

99.05

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

TYK18586.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

5.9e-238

99.76

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T777 Ty3-gypsy retrotransposon protein

2.3e-235

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPP FQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNV PLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

A0A5A7TST6 Ty3-gypsy retrotransposon protein

6.6e-235

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRM NGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NR AKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        G+EKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IE+TSNVPPLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

A0A5A7V6U6 Ty3-gypsy retrotransposon protein

1.2e-236

98.57

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIAS SVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRG KDFLIPKSRSDKNE DDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAR+KKIEL+IDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRK+LI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

A0A5D3CSH0 Ty3-gypsy retrotransposon protein

3.5e-236

99.05

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

A0A5D3D4X3 Ty3-gypsy retrotransposon protein

2.9e-238

99.76

Show/hide

Query:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
        NHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK
Subjt:  NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPK

Query:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
        QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT
Subjt:  QHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT

Query:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
        ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD
Subjt:  ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHD

Query:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
        GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA
Subjt:  GDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVA

Query:  IEMTSNVPPLTQLDDQRKSLI
        IEMTSNVPPLTQLDDQRKSLI
Subjt:  IEMTSNVPPLTQLDDQRKSLI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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AATCACATTGAAAGTTGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTC
AATCGCATCGTTGTCTGTCCAACAGCTGCAAGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCCAAACCATATACGA
AGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGT
GAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCCGAATCCATCGATAATTG
GGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACT
ACATCAACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTA
CAGGGAATAAAACCTCGCACGTTCGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAGATTTCTTGATTCCAAAATCGAGGAG
TGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTCCTTTGAAATCTTTCTCTAAAAGAAAAGAAACAA
AAATTGAAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAG
TTGCTAGAGAACCAACTTATTCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGT
TGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGA
CTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA

mRNA sequence

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Protein sequence

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NHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETC
ETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYIL
QGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQ
LLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

Pay0019072 (gene) of Melon (Payzawat) v1 genome