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Pay0019073 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019073
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:29722964..29723466
RNA-Seq ExpressionPay0019073
SyntenyPay0019073
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON64464.1 hypothetical protein TorRG33x02_273130 [Trema orientale]3.4e-2945.7Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M  +++EIEKFDGKGDF + K K+KA+L        + + S L  T+  S+KE++    YS+LILNL+D+V+RQV E+ T  K+W KL+S Y TK LSNK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
        I L+E+ F +KMD +K+L DN+D+FK+I +   ++++K++DE  ++I+L +
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

PON96088.1 hypothetical protein TorRG33x02_080180, partial [Trema orientale]1.5e-2946.36Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M  +++EIEKFDGKGDF + K K+KA+L       A+ + S L  T+  S+KE++    YS+LILNL+D+V+RQV E+ T  K+W KL+S Y TK LSNK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
        I L+E+ F +KMD +K+L DN+D+FK+I +   ++++K++DE  ++I+L +
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]1.4e-3047.44Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKA-------LLAILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        MA  R EIEKFDGK DF L K KIKA       LLAI +P++   TL+ + KE +ELN Y  +ILN++DS++RQ++++ T Y +W KL   Y  K+L NK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKA-------LLAILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN
           RE+FFTYK+D +K+LTDN++EFK++  EF+S+ D + +E       EA++L+N
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]5.2e-3048.08Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKI-------KALLAILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        MA  + EIEKFD K DF L K KI       KALLAI +PS+   TL+ ++KE +E N Y  +ILN++DSV+RQ++++ T Y +W KL   Y  K+  NK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKI-------KALLAILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN
          LRE+FFTYKMDP+K+LTDN++EFK++  EF+S+ D + +E       EA++L N
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN

XP_038896323.1 uncharacterized protein LOC120084587 [Benincasa hispida]2.1e-3154.49Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M++AR E+EKFDGKGDF L K KIKA+L       A+LNPS LSAT+T  +KED EL  Y                ++ T Y+IW KLE  YATK+L +K
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN
        + L EKFFT+KMD SKTLT+N DEFKKIV EFK+L +KLSD+       EAYVL N
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLIN

TrEMBL top hitse value%identityAlignment
A0A2P5CTT8 Uncharacterized protein1.6e-2945.7Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M  +++EIEKFDGKGDF + K K+KA+L        + + S L  T+  S+KE++    YS+LILNL+D+V+RQV E+ T  K+W KL+S Y TK LSNK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
        I L+E+ F +KMD +K+L DN+D+FK+I +   ++++K++DE  ++I+L +
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

A0A2P5FE65 Uncharacterized protein (Fragment)7.3e-3046.36Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M  +++EIEKFDGKGDF + K K+KA+L       A+ + S L  T+  S+KE++    YS+LILNL+D+V+RQV E+ T  K+W KL+S Y TK LSNK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL-------AILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
        I L+E+ F +KMD +K+L DN+D+FK+I +   ++++K++DE  ++I+L +
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

A0A5A7UB25 Putative gag-pol polyprotein8.1e-2948.67Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI
        MA  R E+ KF+G GDF L + KI+A+L       IL+   L   +T S+K DM+   YS ++L LSD V+R V E  TT ++WKKLES Y TK+L NKI
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI

Query:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
         ++EKFF YKMD SK+L +N+DEF+KIV++  ++ +K+SDE  +VI+L +
Subjt:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

A0A5D3CQJ5 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-2848Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI
        MA  R E+ KF+G GDF L + KI+A+L       IL+   L   +T S+K DM+   YS ++L LSD V+R V E  TT ++WKKLES Y TK+L NKI
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI

Query:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
         ++EKFF YKMD SK+L +N+DEF+KIV++  ++ +K+SDE  + I+L +
Subjt:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

A0A5D3DNU1 Putative gag-pol polyprotein3.6e-2948.67Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI
        MA  R E+ KF+G GDF L + KI+A+L       IL+   L   +T S+K DM+   YS ++L LSD V+R V E  TT ++WKKLES Y TK+L NKI
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALLA------ILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKI

Query:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
         ++EKFF YKMD SK+L +N+DEF+KIV++  ++ +K+SDE  +VI+L +
Subjt:  CLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.1e-1025.17Show/hide
Query:  MAVARVEIEKFDGKGDFVLCKDKIKALL------AILN-PSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK
        M+  + E+ KF+G   F   + +++ LL       +L+  S+   T+      D++    S + L+LSD V+  +I+E T   IW +LES Y +K L+NK
Subjt:  MAVARVEIEKFDGKGDFVLCKDKIKALL------AILN-PSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNK

Query:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA
        + L+++ +   M        +++ F  ++ +  +L  K+ +E  ++++L +
Subjt:  ICLREKFFTYKMDPSKTLTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCGCAAGAGTAGAAATTGAGAAGTTCGATGGAAAGGGAGATTTTGTTCTTTGTAAGGACAAAATCAAGGCTTTGCTAGCCATTTTAAATCCTTCAGAACTTTC
AGCAACACTCACAACATCACAAAAAGAAGACATGGAGTTAAATGTCTATAGTATACTAATCCTAAATTTAAGTGACAGTGTTATAAGGCAAGTAATAGAAGAAGGTACAA
CATACAAAATCTGGAAGAAATTAGAAAGTTCGTATGCTACTAAAAATCTCTCTAATAAAATTTGCCTAAGGGAGAAATTCTTTACATACAAGATGGATCCTTCAAAAACC
TTGACAGACAACATAGATGAGTTCAAGAAGATTGTGTTAGAATTCAAGAGTCTTGAGGACAAACTTAGTGATGAAAAAAACTCAGTGATTGTGTTAGAAGCTTATGTTCT
CATAAATGACCCAAACCTTACAAAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCGCAAGAGTAGAAATTGAGAAGTTCGATGGAAAGGGAGATTTTGTTCTTTGTAAGGACAAAATCAAGGCTTTGCTAGCCATTTTAAATCCTTCAGAACTTTC
AGCAACACTCACAACATCACAAAAAGAAGACATGGAGTTAAATGTCTATAGTATACTAATCCTAAATTTAAGTGACAGTGTTATAAGGCAAGTAATAGAAGAAGGTACAA
CATACAAAATCTGGAAGAAATTAGAAAGTTCGTATGCTACTAAAAATCTCTCTAATAAAATTTGCCTAAGGGAGAAATTCTTTACATACAAGATGGATCCTTCAAAAACC
TTGACAGACAACATAGATGAGTTCAAGAAGATTGTGTTAGAATTCAAGAGTCTTGAGGACAAACTTAGTGATGAAAAAAACTCAGTGATTGTGTTAGAAGCTTATGTTCT
CATAAATGACCCAAACCTTACAAAGAGGTAA
Protein sequenceShow/hide protein sequence
MAVARVEIEKFDGKGDFVLCKDKIKALLAILNPSELSATLTTSQKEDMELNVYSILILNLSDSVIRQVIEEGTTYKIWKKLESSYATKNLSNKICLREKFFTYKMDPSKT
LTDNIDEFKKIVLEFKSLEDKLSDEKNSVIVLEAYVLINDPNLTKR