CuGenDBv2

Gene ID	Pay0019135
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr11:3178799..3180025
RNA-Seq Expression	Pay0019135
Synteny	Pay0019135
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008233 - peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR005162 - Retrotransposon gag domain IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

1.4e-204

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

1.4e-204

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

1.4e-204

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]

1.4e-204

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]

1.4e-204

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

6.6e-205

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

A0A5A7U2V7 Reverse transcriptase

6.6e-205

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

A0A5A7UNA3 Reverse transcriptase

6.6e-205

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

A0A5D3BHI1 Reverse transcriptase

6.6e-205

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

A0A5D3BS67 Reverse transcriptase

6.6e-205

91.36

Show/hide

Query:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DPEKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP
        SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRP
Subjt:  SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRP

Query:  RQQEK
        RQQ K
Subjt:  RQQEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCACCACGTACTGGCAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTTCTGCCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGC
AGGAAATGAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGCAGAGCCTAATGATCCAGAAAAGGCATATGGAATTGAACGGCTGAAGAAGTTAGGGG
CTACAGTGTTTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTG
GCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGTCATATTCGAAGA
TAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCAC
GGTATGCTGACGTTATTGTGGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAAT
TTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCAGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCG
TGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGACTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGA
GACAGAGCCAGAGAATACCTAGTCAACCCACTAGATCAACAGTAAGATCGAACCATCGGGGTCAGTGTTTGGTGGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGA
CATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGATAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCAG
CAGTGGTGCAAGGCAGAAGGGAGTTGTTGGAAGACCTAGGCAACAGGAAAAGTCTATGCTATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRL
ATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTN
FSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPTRSTVRSNHRGQCLVGAGVCYQCGQPG
HFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEKSML

Pay0019135 (gene) of Melon (Payzawat) v1 genome