CuGenDBv2

Gene ID	Pay0019145
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Selenoprotein H
Genome location	chr06:24854390..24854713
RNA-Seq Expression	Pay0019145
Synteny	Pay0019145
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060486.1 selenoprotein H [Cucumis melo var. makuwa]

3.2e-47

97.2

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Query:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCAL+NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVK SLKNGVL INVLLNP
Subjt:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRRVA
        DKPRRVA
Subjt:  DKPRRVA

KAE8652181.1 hypothetical protein Csa_022241 [Cucumis sativus]

2.9e-24

65.71

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SR+ +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  L +LDKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRR
        DKPRR
Subjt:  DKPRR

XP_004138763.1 selenoprotein H [Cucumis sativus]

2.9e-24

65.71

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SR+ +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  L +LDKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRR
        DKPRR
Subjt:  DKPRR

XP_008445096.1 PREDICTED: selenoprotein H [Cucumis melo]

1.3e-24

66.67

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SRV +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  LE+ DKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRR
        DKPRR
Subjt:  DKPRR

XP_008452347.1 PREDICTED: uncharacterized protein LOC103493406 [Cucumis melo]

6.9e-50

100

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Query:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
Subjt:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRRVA
        DKPRRVA
Subjt:  DKPRRVA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

1.4e-24

65.71

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SR+ +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  L +LDKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRR
        DKPRR
Subjt:  DKPRR

A0A1S3BBW1 selenoprotein H

6.4e-25

66.67

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SRV +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  LE+ DKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRR
        DKPRR
Subjt:  DKPRR

A0A1S3BTN8 uncharacterized protein LOC103493406

3.4e-50

100

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Query:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
Subjt:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRRVA
        DKPRRVA
Subjt:  DKPRRVA

A0A5A7V1X0 Selenoprotein H

1.6e-47

97.2

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Query:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCAL+NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVK SLKNGVL INVLLNP
Subjt:  MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DKPRRVA
        DKPRRVA
Subjt:  DKPRRVA

A0A5A7VBJ3 Selenoprotein H

6.0e-23

65.69

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Query:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP
        SRV +S  +L  NSK +L V +  K KK K A K NGKVEEVENKE K+D  LE+ DKDAKS T+VIEH KQCQSFKKRAI V+T L+NGV  I VLLNP
Subjt:  SRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALK-NGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNP

Query:  DK
        DK
Subjt:  DK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

1.5e-10

43.27

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Query:  SFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEV-----ENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNPD
        S ++LM          K +K K V  A K  K EEV     + +E   DA+ +E D D+    IVIEH KQC+SFK+RA  VK  L+  V  I V +NPD
Subjt:  SFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEV-----ENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNPD

Query:  KPRR
        KPRR
Subjt:  KPRR

AT4G31360.1 selenium binding

2.6e-10

47.37

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Query:  ALKNGKVEEVENKETKIDASLEELD---KDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNPDKPRR
        A K  K EEVE  E  ++  +E+ +   +D   T IVIEH KQC +FK RAI VK +L+  V  + V LNP+KPRR
Subjt:  ALKNGKVEEVENKETKIDASLEELD---KDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNPDKPRR

Sequences

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CDS sequence

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ATGTCCAGGGTGATTCAGAGTTTTACTCAACTTATGACAAACTCCAAGGTCAATTTGAATGTCATGAAGTTTTCAAAGTGTAAGAAGGTGAAATGTGCTCTGAAGAATGG
GAAGGTAGAGGAGGTTGAAAATAAGGAAACGAAAATTGATGCTAGCTTAGAGGAACTTGACAAGGATGCTAAGAGTACAACGATTGTGATTGAACATTACAAACAATGCC
AATCATTCAAGAAAAGGGCCATTCACGTGAAAACTAGTCTAAAGAATGGTGTTCTTTGGATCAATGTGTTACTTAACCCTGATAAGCCAAGAAGGGTTGCTTAG

mRNA sequence

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Protein sequence

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MSRVIQSFTQLMTNSKVNLNVMKFSKCKKVKCALKNGKVEEVENKETKIDASLEELDKDAKSTTIVIEHYKQCQSFKKRAIHVKTSLKNGVLWINVLLNPDKPRRVA

Pay0019145 (gene) of Melon (Payzawat) v1 genome