; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0019187 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019187
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:12595124..12596411
RNA-Seq ExpressionPay0019187
SyntenyPay0019187
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera]9.4e-10154.64Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---
        MLFYLTTLNLA+FL E   IL EGETNKEK   +D WKH+++LC+NY+LNGLDNTLYN Y S+ +AK LW SL+KKYK+E  G KKFIVGKFLD+KM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---

Query:  --------EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRK
                E+QVI+H+IH+E M+ S+ FQVA++IEK PP WKDFKNYLKHKRK++ LEEL+VRL IEE+NRK+EK   +++++ KA ++E  P +NKKRK
Subjt:  --------EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRK

Query:  FFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF------------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL
           +  N+     KKF GKC+NC K GH+S D R  K +             K MF   K + Q    +        +EG+GKVILKMTS KELTLN+VL
Subjt:  FFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF------------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL

Query:  HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRYNNNKVSTFCYIVESF-VWHGRLGHVNFN
        HV DI KNLVSGSLLSKNGFKLVFVSDKFVL+KNE                   +  K  NNNK+ +  Y+++S  +WHGRLGHVN++
Subjt:  HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRYNNNKVSTFCYIVESF-VWHGRLGHVNFN

KAA0032601.1 uncharacterized protein E6C27_scaffold43053G00700 [Cucumis melo var. makuwa]3.3e-10687.39Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---
        MLFYL TLNLAKFL E A ILPEGETNKEKQLA+D WKHAEYLCKNYILNGLDNTLYN YSSVDSAKNLWTSLEKKYK+EV GAKKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---

Query:  -----EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFG
             ++QVI+HDIHAENMTLSE FQVASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDSTID KA IVEN+PHSNKKRKF  
Subjt:  -----EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFG

Query:  EGSNKNPRFTKKFNGKCFNCNKMGHQSKDC
        EGSNK PRFTKKFNGKCFNCNKMGHQSKDC
Subjt:  EGSNKNPRFTKKFNGKCFNCNKMGHQSKDC

KAA0042920.1 pol polyprotein [Cucumis melo var. makuwa]1.6e-11366.3Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ
        MLFYLTTLNLAKFL E A IL EGET+KEKQLA+D WKHA YLCKNY LNGLDNTLYN YSSVDS KNLWTSLEKKY+ EV G KKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ

Query:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR
                ++ T      VASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDS IDPKA IVEN+PHSNKKRKFFGEGSNK PR
Subjt:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR

Query:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------------------------------------------------KNMFKLISQKLMKYQM---
        FTKK N KCFNCNKMGHQSKD  K KNFQ                                                    KNMF          Q+   
Subjt:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------------------------------------------------KNMFKLISQKLMKYQM---

Query:  ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEI
              V+ QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKFV SKNE+
Subjt:  ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEI

TYK02905.1 pol polyprotein [Cucumis melo var. makuwa]3.5e-12478.19Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ
        MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEYSSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ

Query:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR
                ++ T      VASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN+PHSNKKRKF GEGSNKNPR
Subjt:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR

Query:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLM----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK
        FTKKFNGKCFNCNKMGHQSKDC        ++  +IS+  M    K   VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDK
Subjt:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLM----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK

Query:  FVLSKNEI-CTKRYNNNKVST
        FVLSKNE+   K Y ++ V+T
Subjt:  FVLSKNEI-CTKRYNNNKVST

XP_008467076.1 PREDICTED: uncharacterized protein LOC103504514, partial [Cucumis melo]1.2e-10371.01Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EI
        MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEYSSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM + 
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EI

Query:  QVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNP
        + ++  +        +  QVASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN+PHSNKKRKF GE  ++  
Subjt:  QVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNP

Query:  RFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF
              +       CN +G+                        K   VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKF
Subjt:  RFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF

Query:  VLSKNEI
        VLSKNE+
Subjt:  VLSKNEI

TrEMBL top hitse value%identityAlignment
A0A1S3CTZ4 uncharacterized protein LOC1035045145.7e-10471.01Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EI
        MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEYSSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM + 
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EI

Query:  QVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNP
        + ++  +        +  QVASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN+PHSNKKRKF GE  ++  
Subjt:  QVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNP

Query:  RFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF
              +       CN +G+                        K   VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKF
Subjt:  RFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF

Query:  VLSKNEI
        VLSKNE+
Subjt:  VLSKNEI

A0A5A7SSS0 CCHC-type domain-containing protein1.6e-10687.39Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---
        MLFYL TLNLAKFL E A ILPEGETNKEKQLA+D WKHAEYLCKNYILNGLDNTLYN YSSVDSAKNLWTSLEKKYK+EV GAKKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---

Query:  -----EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFG
             ++QVI+HDIHAENMTLSE FQVASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDSTID KA IVEN+PHSNKKRKF  
Subjt:  -----EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFG

Query:  EGSNKNPRFTKKFNGKCFNCNKMGHQSKDC
        EGSNK PRFTKKFNGKCFNCNKMGHQSKDC
Subjt:  EGSNKNPRFTKKFNGKCFNCNKMGHQSKDC

A0A5A7THY2 Pol polyprotein8.0e-11466.3Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ
        MLFYLTTLNLAKFL E A IL EGET+KEKQLA+D WKHA YLCKNY LNGLDNTLYN YSSVDS KNLWTSLEKKY+ EV G KKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ

Query:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR
                ++ T      VASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDS IDPKA IVEN+PHSNKKRKFFGEGSNK PR
Subjt:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR

Query:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------------------------------------------------KNMFKLISQKLMKYQM---
        FTKK N KCFNCNKMGHQSKD  K KNFQ                                                    KNMF          Q+   
Subjt:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------------------------------------------------KNMFKLISQKLMKYQM---

Query:  ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEI
              V+ QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKFV SKNE+
Subjt:  ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEI

A0A5D3BUY6 Pol polyprotein1.7e-12478.19Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ
        MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEYSSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQ

Query:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR
                ++ T      VASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN+PHSNKKRKF GEGSNKNPR
Subjt:  VIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPR

Query:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLM----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK
        FTKKFNGKCFNCNKMGHQSKDC        ++  +IS+  M    K   VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDK
Subjt:  FTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLM----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK

Query:  FVLSKNEI-CTKRYNNNKVST
        FVLSKNE+   K Y ++ V+T
Subjt:  FVLSKNEI-CTKRYNNNKVST

A5CBN2 Uncharacterized protein4.5e-10154.64Show/hide
Query:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---
        MLFYLTTLNLA+FL E   IL EGETNKEK   +D WKH+++LC+NY+LNGLDNTLYN Y S+ +AK LW SL+KKYK+E  G KKFIVGKFLD+KM   
Subjt:  MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM---

Query:  --------EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRK
                E+QVI+H+IH+E M+ S+ FQVA++IEK PP WKDFKNYLKHKRK++ LEEL+VRL IEE+NRK+EK   +++++ KA ++E  P +NKKRK
Subjt:  --------EIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRK

Query:  FFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF------------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL
           +  N+     KKF GKC+NC K GH+S D R  K +             K MF   K + Q    +        +EG+GKVILKMTS KELTLN+VL
Subjt:  FFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF------------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL

Query:  HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRYNNNKVSTFCYIVESF-VWHGRLGHVNFN
        HV DI KNLVSGSLLSKNGFKLVFVSDKFVL+KNE                   +  K  NNNK+ +  Y+++S  +WHGRLGHVN++
Subjt:  HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRYNNNKVSTFCYIVESF-VWHGRLGHVNFN

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-0619.4Show/hide
Query:  ETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGK-----------FLDYKMEIQVIVHDIHAENMTL
        ++ K   +  + W   +    + I   L + + N     D+A+ +WT LE  Y S+ +  K ++  +           FL +      ++  +    + +
Subjt:  ETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGK-----------FLDYKMEIQVIVHDIHAENMTL

Query:  SEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPH-----SNKKRKFFGEGSNKNPRFTKKFNGK
         E  +   ++   P S+ +    + H +  I+L+++   L + E  RK  +         +A+I E +       SN   +    G +KN   ++  N  
Subjt:  SEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPH-----SNKKRKFFGEGSNKNPRFTKKFNGK

Query:  CFNCNKMGHQSKDC---RKQK---NFQKN---------------------------------------------------------MFKLISQKLMKYQM
        C+NCN+ GH  +DC   RK K   + QKN                                                          F  +      Y  
Subjt:  CFNCNKMGHQSKDC---RKQK---NFQKN---------------------------------------------------------MFKLISQKLMKYQM

Query:  VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEICTKR-------YNNN------KVSTFCYIVESFVWHGRLGH
        + G G + +K      L L +V HV D+R NL+SG  L ++G++  F + K+ L+K  +   +       Y  N      +++     +   +WH R+GH
Subjt:  VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEICTKR-------YNNN------KVSTFCYIVESFVWHGRLGH

Query:  VN
        ++
Subjt:  VN

Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein1.6e-1027.24Show/hide
Query:  MLFYLTTLNLAKFLIE-CASI-LPEG-ETNKEKQLAIDV----WKHAEYLCKNYILNGLDNTLYNEYS-SVDSAKNLWTSLEKKYKSEVVGAKKFIVGKF
        M  +L  L L   L E C SI   +G ETN  +    D     W   +YLC  +++N L + LY  YS     AK LW  L+  Y+ +   +K+  V K+
Subjt:  MLFYLTTLNLAKFLIE-CASI-LPEG-ETNKEKQLAIDV----WKHAEYLCKNYILNGLDNTLYNEYS-SVDSAKNLWTSLEKKYKSEVVGAKKFIVGKF

Query:  LDYKM--------EIQV---IVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKR--------KKIKLEELVVRLGIEENNRKAEKCIIDSTIDP
        ++++M        ++QV   I   I +  M L E F V++II KFPPSW+ F   L  +         +++K EE ++R G +    +           P
Subjt:  LDYKM--------EIQV---IVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKR--------KKIKLEELVVRLGIEENNRKAEKCIIDSTIDP

Query:  KAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQK
                  S   ++       K P   ++    C NC + GH +K C   K+ ++
Subjt:  KAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCTATCTCACCACTTTAAATTTGGCAAAGTTTCTTATAGAGTGTGCTTCCATTTTACCTGAGGGAGAAACTAACAAAGAAAAGCAACTTGCAATTGATGTATG
GAAACATGCAGAATATCTTTGCAAAAATTACATTCTGAATGGATTGGACAACACGCTGTACAATGAGTATAGTAGTGTTGATTCAGCAAAAAATCTATGGACTTCATTAG
AGAAGAAGTACAAATCTGAAGTTGTTGGTGCAAAAAAATTTATCGTTGGAAAATTTCTGGATTACAAAATGGAAATCCAGGTAATCGTACATGATATACATGCTGAGAAT
ATGACTTTAAGTGAGTATTTTCAGGTAGCATCAATAATTGAAAAATTTCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGCATAAACGCAAAAAGATAAAGCTTGA
GGAACTTGTAGTTCGACTTGGGATTGAAGAGAATAATAGAAAGGCAGAAAAGTGTATTATAGATAGTACAATAGACCCCAAGGCCATTATTGTGGAAAATAAACCACACA
GTAACAAGAAAAGGAAATTTTTTGGTGAAGGTTCAAATAAAAACCCGCGATTCACAAAAAAGTTCAATGGCAAGTGCTTCAACTGCAACAAAATGGGACATCAATCTAAG
GATTGTCGTAAACAAAAGAACTTTCAGAAAAACATGTTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGAC
CTCTAGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCGTGACATTCGCAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTAT
CTGATAAATTTGTACTTTCCAAGAATGAGATTTGTACCAAAAGGTATAATAATAATAAAGTATCTACTTTTTGTTATATTGTTGAGTCATTTGTTTGGCATGGCAGACTA
GGACATGTCAACTTCAATTTTTTTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCTATCTCACCACTTTAAATTTGGCAAAGTTTCTTATAGAGTGTGCTTCCATTTTACCTGAGGGAGAAACTAACAAAGAAAAGCAACTTGCAATTGATGTATG
GAAACATGCAGAATATCTTTGCAAAAATTACATTCTGAATGGATTGGACAACACGCTGTACAATGAGTATAGTAGTGTTGATTCAGCAAAAAATCTATGGACTTCATTAG
AGAAGAAGTACAAATCTGAAGTTGTTGGTGCAAAAAAATTTATCGTTGGAAAATTTCTGGATTACAAAATGGAAATCCAGGTAATCGTACATGATATACATGCTGAGAAT
ATGACTTTAAGTGAGTATTTTCAGGTAGCATCAATAATTGAAAAATTTCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGCATAAACGCAAAAAGATAAAGCTTGA
GGAACTTGTAGTTCGACTTGGGATTGAAGAGAATAATAGAAAGGCAGAAAAGTGTATTATAGATAGTACAATAGACCCCAAGGCCATTATTGTGGAAAATAAACCACACA
GTAACAAGAAAAGGAAATTTTTTGGTGAAGGTTCAAATAAAAACCCGCGATTCACAAAAAAGTTCAATGGCAAGTGCTTCAACTGCAACAAAATGGGACATCAATCTAAG
GATTGTCGTAAACAAAAGAACTTTCAGAAAAACATGTTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGAC
CTCTAGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCGTGACATTCGCAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTAT
CTGATAAATTTGTACTTTCCAAGAATGAGATTTGTACCAAAAGGTATAATAATAATAAAGTATCTACTTTTTGTTATATTGTTGAGTCATTTGTTTGGCATGGCAGACTA
GGACATGTCAACTTCAATTTTTTTGCGTAG
Protein sequenceShow/hide protein sequence
MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAEN
MTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSK
DCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEICTKRYNNNKVSTFCYIVESFVWHGRL
GHVNFNFFA