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Pay0019227 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019227
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationchr06:30065119..30067872
RNA-Seq ExpressionPay0019227
SyntenyPay0019227
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0070469 - respirasome (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033970.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]6.1e-6287.23Show/hide
Query:  GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR
        GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR
Subjt:  GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR

Query:  MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH
        MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH
Subjt:  MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]3.6e-2275.31Show/hide
Query:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ
        VEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVM PDLKSFIRQVPTGSEG Q
Subjt:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ

TYK02574.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]3.4e-4982.4Show/hide
Query:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQFQSPPSLLG
        VEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVM PDLKSFIRQVPTGSEGTQTKR QF+RNQF+SPPSLLG
Subjt:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQFQSPPSLLG

Query:  LAIHLDPEHGSHMNDDCPSRRTRQH
        LAIHLDPEHGSHMNDDCPSRRTRQH
Subjt:  LAIHLDPEHGSHMNDDCPSRRTRQH

XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]2.4e-2651.68Show/hide
Query:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ---------TKRMQFERN--
        VEWICWLNGQRKKAPTPE           +     +LKKEEMERNSKEG LRKIISTGQVM PDLKSFIRQVPTGSEG Q         + R   E+   
Subjt:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ---------TKRMQFERN--

Query:  ------------------------QFQSPPSLLGLAIHLDPEHGSHMND
                                 +  PPSLLGLAIHL+ EHGSH ++
Subjt:  ------------------------QFQSPPSLLGLAIHLDPEHGSHMND

XP_031738722.1 uncharacterized protein LOC101214441 isoform X3 [Cucumis sativus]2.4e-2651.68Show/hide
Query:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ---------TKRMQFERN--
        VEWICWLNGQRKKAPTPE           +     +LKKEEMERNSKEG LRKIISTGQVM PDLKSFIRQVPTGSEG Q         + R   E+   
Subjt:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ---------TKRMQFERN--

Query:  ------------------------QFQSPPSLLGLAIHLDPEHGSHMND
                                 +  PPSLLGLAIHL+ EHGSH ++
Subjt:  ------------------------QFQSPPSLLGLAIHLDPEHGSHMND

TrEMBL top hitse value%identityAlignment
A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.1e-2173.75Show/hide
Query:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ
        VEWICWLNGQRKKAPTPE           +     +LKKEEMERNSKEG LRKIISTGQVM PDLKSFIRQVPTGSEG Q
Subjt:  VEWICWLNGQRKKAPTPE-----------LSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.7e-2275.31Show/hide
Query:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ
        VEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVM PDLKSFIRQVPTGSEG Q
Subjt:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQ

A0A5A7SSN7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.9e-6287.23Show/hide
Query:  GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR
        GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR
Subjt:  GRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKR

Query:  MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH
        MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH
Subjt:  MQFERNQFQSPPSLLGLAIHLDPEHGSHMNDDCPSRRTRQH

A0A5D3BTS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.7e-4982.4Show/hide
Query:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQFQSPPSLLG
        VEWICWLNGQRKKAPTPE  ++ L            +LKKEEMERNSKEGKLRKIISTGQVM PDLKSFIRQVPTGSEGTQTKR QF+RNQF+SPPSLLG
Subjt:  VEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQFQSPPSLLG

Query:  LAIHLDPEHGSHMNDDCPSRRTRQH
        LAIHLDPEHGSHMNDDCPSRRTRQH
Subjt:  LAIHLDPEHGSHMNDDCPSRRTRQH

A0A6J1DST3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 128.6e-2252.59Show/hide
Query:  IINMSWVCRLGRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVP
        +  M W+C  G    A      FI+ VEWICWLNGQRKKAPTPE  ++ L            +LKK+EMERNS+EG LRK+IS  QV  PDL SFIRQ P
Subjt:  IINMSWVCRLGRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINL------------VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVP

Query:  TGSEGTQTKRMQFERN
        TGSEG Q +     RN
Subjt:  TGSEGTQTKRMQFERN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit3.2e-1345.56Show/hide
Query:  VEWICWLNGQRKKAPTPELSV----------INL-VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQ
        VEWICWLNGQRK+APTPE  +          +N+ +LKKEE E+ ++ G  RK I+ G+V  PDL SF+RQ P  S+G + +    E ++
Subjt:  VEWICWLNGQRKKAPTPELSV----------INL-VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQ

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit3.2e-1345.56Show/hide
Query:  VEWICWLNGQRKKAPTPELSV----------INL-VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQ
        VEWICWLNGQRK+APTPE  +          +N+ +LKKEE E+ ++ G  RK I+ G+V  PDL SF+RQ P  S+G + +    E ++
Subjt:  VEWICWLNGQRKKAPTPELSV----------INL-VLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTAACATGAGCTGGGTATGTCGTTTAGGAAGAACTGGGTTTGCTGATGATGATTGCTTATATTTTATTGCCGCGGTGGAATGGATATGTTGGTTAAATGGACA
GCGTAAAAAGGCTCCAACCCCAGAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTG
GTCAAGTTATGAGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGAACTCAAACGAAAAGGATGCAGTTCGAGAGAAACCAATTCCAGAGTCCT
CCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTATTAACATGAGCTGGGTATGTCGTTTAGGAAGAACTGGGTTTGCTGATGATGATTGCTTATATTTTATTGCCGCGGTGGAATGGATATGTTGGTTAAATGGACA
GCGTAAAAAGGCTCCAACCCCAGAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTG
GTCAAGTTATGAGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGAACTCAAACGAAAAGGATGCAGTTCGAGAGAAACCAATTCCAGAGTCCT
CCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAAGCTAGCAGTTCGTTCT
ATATCCAACAATTCAGTAAGCTTCTGAGTTCCGTTTACTTACCTCCAAATTTTCCTTAGGACATGCCCTTCTACTTGACCGTATCAGATCCTGCCCTCCAAAAGTCTCAA
ACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGCCATATGTAATATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATGTAGTAAGTTTAATAAGCATCC
TTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGCGGCATTGCCTTGGAAAATTCACTGTGGAATT
GATATTATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCATATTATTGAAACTCATTGTAATAATGTTTTCAGGCTCGGCTTGAGGGATAAATAATCATGA
TGCATGCGATATTTTGTTGTGTGCTCTTGCTACTAAA
Protein sequenceShow/hide protein sequence
MIINMSWVCRLGRTGFADDDCLYFIAAVEWICWLNGQRKKAPTPELSVINLVLKKEEMERNSKEGKLRKIISTGQVMSPDLKSFIRQVPTGSEGTQTKRMQFERNQFQSP
PSLLGLAIHLDPEHGSHMNDDCPSRRTRQH