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Pay0019244 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019244
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionZinc finger CCHC domain-containing protein 7 isoform X2
Genome locationchr09:16935354..16939222
RNA-Seq ExpressionPay0019244
SyntenyPay0019244
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652476.1 hypothetical protein Csa_013055 [Cucumis sativus]8.6e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
TYK28515.1 zinc finger CCHC domain-containing protein 7 isoform X2 [Cucumis melo var. makuwa]8.6e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
XP_008453512.1 PREDICTED: zinc finger CCHC domain-containing protein 7 isoform X3 [Cucumis melo]5.1e-1178.57Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTKVIDEG
        KGGKR+LE+TS AASP+SCYRCGEQGHFAR+CAGSTK+   G
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTKVIDEG
XP_011649266.1 zinc finger CCHC domain-containing protein 7 isoform X1 [Cucumis sativus]8.6e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
XP_011649268.1 zinc finger CCHC domain-containing protein 7 isoform X2 [Cucumis sativus]8.6e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
TrEMBL top hitse value%identityAlignment
A0A0A0LSB8 Uncharacterized protein4.2e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
A0A1S3BX80 zinc finger CCHC domain-containing protein 7 isoform X29.3e-1186.49Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFAR+CAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
A0A1S3BXL1 zinc finger CCHC domain-containing protein 7 isoform X32.4e-1178.57Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTKVIDEG
        KGGKR+LE+TS AASP+SCYRCGEQGHFAR+CAGSTK+   G
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTKVIDEG
A0A5A7UTU3 Zinc finger CCHC domain-containing protein 7 isoform X29.3e-1186.49Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFAR+CAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
A0A5D3DYV3 Zinc finger CCHC domain-containing protein 7 isoform X24.2e-1189.19Show/hide
Query:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
        KGGKR+LE+TS AASP+SCYRCGEQGHFARECAGSTK
Subjt:  KGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G43590.1 zinc knuckle (CCHC-type) family protein2.2e-0448.39Show/hide
Query:  EQTSSAASPNSCYRCGEQGHFARECAGSTKV
        E+  ++   + CYRCGE+GHFAREC  S+ +
Subjt:  EQTSSAASPNSCYRCGEQGHFARECAGSTKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTCTTTTCAAGGGTGGCAAGAGGGTTCTTGAGCAAACTTCTAGTGCTGCATCACCTAACTCATGCTATAGATGTGGTGAACAAGGGCATTTTGCTCGGGAGTG
TGCAGGTTCCACCAAGGTCATTGACGAAGGTGTTTCGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTCTTTTCAAGGGTGGCAAGAGGGTTCTTGAGCAAACTTCTAGTGCTGCATCACCTAACTCATGCTATAGATGTGGTGAACAAGGGCATTTTGCTCGGGAGTG
TGCAGGTTCCACCAAGGTCATTGACGAAGGTGTTTCGTGTTAG
Protein sequenceShow/hide protein sequence
MTVLFKGGKRVLEQTSSAASPNSCYRCGEQGHFARECAGSTKVIDEGVSC