; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0019247 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019247
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr04:12353408..12354582
RNA-Seq ExpressionPay0019247
SyntenyPay0019247
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038206.1 uncharacterized protein E6C27_scaffold270G00430 [Cucumis melo var. makuwa]1.3e-3052.22Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE
        +FNG+MD EKF+DWIKNVE FF YANT EHKKVRLVALKLQGGASA W   L                                                
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE

Query:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS
            Q +R + DA SLASKIE +EEIKKTK  QRKN+WDK Q  NPTNSFRNFQ GSSS+ SQP KKD+  PK  ATKPS
Subjt:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS

KAA0058889.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]4.5e-8464.14Show/hide
Query:  MDAESSFDQCLQLVEQVVVELRQGQSHLQQTLSHKEDSIFDHTIKKTKKYVLKWI----------------SFNGRMDVEKFIDWIKNVENFFDYANTLE
        MDA++SFDQ LQLVEQ +VELRQ  S      S  ED++ +  I +  +  L ++                +FNGRMDVEKF+DWIKNVENFFDYAN  E
Subjt:  MDAESSFDQCLQLVEQVVVELRQGQSHLQQTLSHKEDSIFDHTIKKTKKYVLKWI----------------SFNGRMDVEKFIDWIKNVENFFDYANTLE

Query:  HKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPETEHQQISRFIH
        HKKV+LVALKLQGGASA                   WPKML LMKKRFLPINYQQLLYNQYQQCHQG RSIMDYTEEFYRLGAR+NLPETEHQQISR IH
Subjt:  HKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPETEHQQISRFIH

Query:  -------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPSAVN
                           DAIS+ASKIEDNEEIKKTKIAQRKNNWDKQ ANPTNSFRNF  GSSSSTSQPTKKDENLPKF  TK   +N
Subjt:  -------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPSAVN

TYK30599.1 uncharacterized protein E5676_scaffold84664G00070 [Cucumis melo var. makuwa]1.3e-3052.22Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE
        +FNG+MD EKF+DWIKNVE FF YANT EHKKVRLVALKLQGGASA W   L                                                
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE

Query:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS
            Q +R + DA SLASKIE +EEIKKTK  QRKN+WDK Q  NPTNSFRNFQ GSSS+ SQP KKD+  PK  ATKPS
Subjt:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS

XP_022138327.1 uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]1.5e-3142.29Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI
        +FNG+MDVE F+D +KNVENFFDY NT E KKV+LVA K+Q GASA                   WP+ML LM++RFLP N++QLLY  YQ+C QG ++I
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI

Query:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST
         DYTE F+RLGA+ N+ ETE  +I+RF+                    DAI +A+KIED    K+ +   R+  WDK   +    T++ +  Q G++S++
Subjt:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST

Query:  SQPTKKDENLPKFSATKPSAVNKDTSS
        +  TK  ++  K S  K      DTSS
Subjt:  SQPTKKDENLPKFSATKPSAVNKDTSS

XP_022138328.1 uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]1.5e-3142.29Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI
        +FNG+MDVE F+D +KNVENFFDY NT E KKV+LVA K+Q GASA                   WP+ML LM++RFLP N++QLLY  YQ+C QG ++I
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI

Query:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST
         DYTE F+RLGA+ N+ ETE  +I+RF+                    DAI +A+KIED    K+ +   R+  WDK   +    T++ +  Q G++S++
Subjt:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST

Query:  SQPTKKDENLPKFSATKPSAVNKDTSS
        +  TK  ++  K S  K      DTSS
Subjt:  SQPTKKDENLPKFSATKPSAVNKDTSS

TrEMBL top hitse value%identityAlignment
A0A5A7T7L8 CCHC-type domain-containing protein6.2e-3152.22Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE
        +FNG+MD EKF+DWIKNVE FF YANT EHKKVRLVALKLQGGASA W   L                                                
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE

Query:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS
            Q +R + DA SLASKIE +EEIKKTK  QRKN+WDK Q  NPTNSFRNFQ GSSS+ SQP KKD+  PK  ATKPS
Subjt:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS

A0A5D3DJC1 Transposon Ty3-G Gag-Pol polyprotein2.2e-8464.14Show/hide
Query:  MDAESSFDQCLQLVEQVVVELRQGQSHLQQTLSHKEDSIFDHTIKKTKKYVLKWI----------------SFNGRMDVEKFIDWIKNVENFFDYANTLE
        MDA++SFDQ LQLVEQ +VELRQ  S      S  ED++ +  I +  +  L ++                +FNGRMDVEKF+DWIKNVENFFDYAN  E
Subjt:  MDAESSFDQCLQLVEQVVVELRQGQSHLQQTLSHKEDSIFDHTIKKTKKYVLKWI----------------SFNGRMDVEKFIDWIKNVENFFDYANTLE

Query:  HKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPETEHQQISRFIH
        HKKV+LVALKLQGGASA                   WPKML LMKKRFLPINYQQLLYNQYQQCHQG RSIMDYTEEFYRLGAR+NLPETEHQQISR IH
Subjt:  HKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPETEHQQISRFIH

Query:  -------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPSAVN
                           DAIS+ASKIEDNEEIKKTKIAQRKNNWDKQ ANPTNSFRNF  GSSSSTSQPTKKDENLPKF  TK   +N
Subjt:  -------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPSAVN

A0A5D3E462 CCHC-type domain-containing protein6.2e-3152.22Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE
        +FNG+MD EKF+DWIKNVE FF YANT EHKKVRLVALKLQGGASA W   L                                                
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPE

Query:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS
            Q +R + DA SLASKIE +EEIKKTK  QRKN+WDK Q  NPTNSFRNFQ GSSS+ SQP KKD+  PK  ATKPS
Subjt:  TEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDK-QIANPTNSFRNFQHGSSSSTSQPTKKDENLPKFSATKPS

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X17.3e-3242.29Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI
        +FNG+MDVE F+D +KNVENFFDY NT E KKV+LVA K+Q GASA                   WP+ML LM++RFLP N++QLLY  YQ+C QG ++I
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI

Query:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST
         DYTE F+RLGA+ N+ ETE  +I+RF+                    DAI +A+KIED    K+ +   R+  WDK   +    T++ +  Q G++S++
Subjt:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST

Query:  SQPTKKDENLPKFSATKPSAVNKDTSS
        +  TK  ++  K S  K      DTSS
Subjt:  SQPTKKDENLPKFSATKPSAVNKDTSS

A0A6J1CCQ8 uncharacterized protein LOC111009540 isoform X27.3e-3242.29Show/hide
Query:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI
        +FNG+MDVE F+D +KNVENFFDY NT E KKV+LVA K+Q GASA                   WP+ML LM++RFLP N++QLLY  YQ+C QG ++I
Subjt:  SFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASA------------------CWPKMLCLMKKRFLPINYQQLLYNQYQQCHQGSRSI

Query:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST
         DYTE F+RLGA+ N+ ETE  +I+RF+                    DAI +A+KIED    K+ +   R+  WDK   +    T++ +  Q G++S++
Subjt:  MDYTEEFYRLGARNNLPETEHQQISRFIH-------------------DAISLASKIEDNEEIKKTKIAQRKNNWDKQIAN---PTNSFRNFQHGSSSST

Query:  SQPTKKDENLPKFSATKPSAVNKDTSS
        +  TK  ++  K S  K      DTSS
Subjt:  SQPTKKDENLPKFSATKPSAVNKDTSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGGAATCCTCGTTCGACCAATGCTTGCAGTTGGTAGAACAAGTTGTAGTAGAACTTCGACAAGGTCAGTCGCATTTACAGCAAACATTAAGCCATAAAGAGGA
CTCGATTTTCGACCATACAATCAAGAAAACCAAGAAATACGTATTAAAGTGGATCTCCTTCAATGGTCGAATGGACGTAGAGAAGTTTATTGATTGGATCAAGAACGTGG
AGAATTTTTTCGACTATGCCAATACACTTGAACACAAGAAGGTTCGATTAGTTGCTCTCAAACTCCAAGGTGGTGCAAGCGCTTGTTGGCCAAAGATGTTGTGTCTAATG
AAGAAAAGATTCCTACCAATCAACTACCAGCAGCTACTTTACAATCAATACCAACAGTGTCATCAAGGCTCACGAAGCATCATGGATTATACAGAAGAATTTTACAGACT
TGGCGCTCGAAATAATCTGCCTGAAACTGAACATCAACAAATTTCCAGGTTTATTCATGATGCCATCTCCTTAGCTTCCAAGATTGAAGACAATGAAGAGATCAAGAAAA
CAAAGATTGCTCAAAGAAAGAATAATTGGGACAAACAAATAGCTAATCCAACTAACTCATTCAGAAATTTCCAACATGGAAGTTCCTCCTCAACTTCACAACCCACCAAG
AAAGATGAAAACCTACCAAAATTTTCAGCCACCAAACCAAGTGCAGTCAACAAGGACACCTCTTCAATGAGTGCCCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCGGAATCCTCGTTCGACCAATGCTTGCAGTTGGTAGAACAAGTTGTAGTAGAACTTCGACAAGGTCAGTCGCATTTACAGCAAACATTAAGCCATAAAGAGGA
CTCGATTTTCGACCATACAATCAAGAAAACCAAGAAATACGTATTAAAGTGGATCTCCTTCAATGGTCGAATGGACGTAGAGAAGTTTATTGATTGGATCAAGAACGTGG
AGAATTTTTTCGACTATGCCAATACACTTGAACACAAGAAGGTTCGATTAGTTGCTCTCAAACTCCAAGGTGGTGCAAGCGCTTGTTGGCCAAAGATGTTGTGTCTAATG
AAGAAAAGATTCCTACCAATCAACTACCAGCAGCTACTTTACAATCAATACCAACAGTGTCATCAAGGCTCACGAAGCATCATGGATTATACAGAAGAATTTTACAGACT
TGGCGCTCGAAATAATCTGCCTGAAACTGAACATCAACAAATTTCCAGGTTTATTCATGATGCCATCTCCTTAGCTTCCAAGATTGAAGACAATGAAGAGATCAAGAAAA
CAAAGATTGCTCAAAGAAAGAATAATTGGGACAAACAAATAGCTAATCCAACTAACTCATTCAGAAATTTCCAACATGGAAGTTCCTCCTCAACTTCACAACCCACCAAG
AAAGATGAAAACCTACCAAAATTTTCAGCCACCAAACCAAGTGCAGTCAACAAGGACACCTCTTCAATGAGTGCCCTCAAATGA
Protein sequenceShow/hide protein sequence
MDAESSFDQCLQLVEQVVVELRQGQSHLQQTLSHKEDSIFDHTIKKTKKYVLKWISFNGRMDVEKFIDWIKNVENFFDYANTLEHKKVRLVALKLQGGASACWPKMLCLM
KKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLPETEHQQISRFIHDAISLASKIEDNEEIKKTKIAQRKNNWDKQIANPTNSFRNFQHGSSSSTSQPTK
KDENLPKFSATKPSAVNKDTSSMSALK